FFCP PHASE1:Mm9::chr12:76409295..76409304,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80837|HGNC=|UniProt=Q9ER71,D3YX61|association_with_transcript=0bp_to_NM_023275,uc007nxa.1,uc007nxb.1,uc007nxc.1_5end|description=CAGE_peak_10_at_Rhoj_5end|id=chr12:76409295..76409304,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.47e-10,8;CL:0000128,2.65e-09,6;CL:0000126,2.65e-09,6;CL:0000127,2.65e-09,6;CL:0000333,4.41e-08,10;CL:0000095,4.41e-08,10;CL:0000243,4.41e-08,10;CL:0000123,4.41e-08,10;CL:0000125,4.41e-08,10;CL:0000030,4.41e-08,10;CL:0000339,4.41e-08,10;CL:0002605,8.02e-08,2;CL:0002604,8.02e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,8.87e-08,7;UBERON:0004710,8.87e-08,7;UBERON:0005419,8.87e-08,7;UBERON:0005417,8.87e-08,7;UBERON:0005729,8.87e-08,7;UBERON:0010708,8.36e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.11514624341466,0.550640256485045,2.34717403304412,0.65407546914134,1.75748946187577,2.13872888981712,0.979904951377538,1.43752564364972,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0.202316460859598,0.528990979272033,0,1.0165335962074,0,0,0,0,0,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0,0.395658863190582,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.904335843315735,0.470354828542819,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,1.73126918545538,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0.540186389416048,0.753524089178575,1.08858398642125,1.2811372028485,0.655912071918102,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,1.7535658594206,1.39023624612799,1.74126083261083,2.26360350048738,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.671032093801859,0,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0.758671603812327,0.571242563048644,0,0.407302655690628,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.289298117163023,0,0,1.96705709207614,0.275936746304732,0.160550589987792,0.468846746368813,0.327869890753351,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,1.21443210502468,0.292255857911312,0,0.963963949265421,0.709700426041343,1.78065603667255,0.977321756121456,0.659880491890142,0,0,0,0.565815239267694,0.590603785761546,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,1.24858172321449,0.493647061806363,0.913394847343798,1.17335854031855,0.63549621259146,0.220528398054962,0.98931751764888,1.29171541356724,0.784068024066026,1.07435109602823,0.492422699235184,0,0.556275906031529,0,0.619160603889667,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,0.432021363287205,0,0.436725127492355,0.539457385539283,0.41326727862668,0.26175594198403,0.518459893167171,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.506868376472335,0.704143431874524,0.911430693907651,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0.772758376128762,0.187682475451182,1.09890974560359,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.512200817262403,1.94485373654635,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.842773567228942,0.640251524048693,0.804096565378586,0.952587382566147,1.39061191133827,0.192909220463705,0.824171801606613,1.17759136107518,0,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.423073039458382,1.28049581010941,0.263069711437843,0.543216455383447,0,0.474540072496697,0.689531376628944,0.409231043169689,0.929621047115796,0.578719832943424,0,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0.927471342481686|short_description=p10@Rhoj}} | ||
|EntrezGene=80837 | |||
|HGNC= | |||
|UniProt=Q9ER71,D3YX61 | |||
|association_with_transcript=0bp_to_NM_023275,uc007nxa.1,uc007nxb.1,uc007nxc.1_5end | |||
|description=CAGE_peak_10_at_Rhoj_5end | |||
|id=chr12:76409295..76409304,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.47e-10,8;CL:0000128,2.65e-09,6;CL:0000126,2.65e-09,6;CL:0000127,2.65e-09,6;CL:0000333,4.41e-08,10;CL:0000095,4.41e-08,10;CL:0000243,4.41e-08,10;CL:0000123,4.41e-08,10;CL:0000125,4.41e-08,10;CL:0000030,4.41e-08,10;CL:0000339,4.41e-08,10;CL:0002605,8.02e-08,2;CL:0002604,8.02e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,8.87e-08,7;UBERON:0004710,8.87e-08,7;UBERON:0005419,8.87e-08,7;UBERON:0005417,8.87e-08,7;UBERON:0005729,8.87e-08,7;UBERON:0010708,8.36e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.11514624341466,0.550640256485045,2.34717403304412,0.65407546914134,1.75748946187577,2.13872888981712,0.979904951377538,1.43752564364972,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0.202316460859598,0.528990979272033,0,1.0165335962074,0,0,0,0,0,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0,0.395658863190582,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.904335843315735,0.470354828542819,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,1.73126918545538,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0.540186389416048,0.753524089178575,1.08858398642125,1.2811372028485,0.655912071918102,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,1.7535658594206,1.39023624612799,1.74126083261083,2.26360350048738,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.671032093801859,0,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0.758671603812327,0.571242563048644,0,0.407302655690628,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.289298117163023,0,0,1.96705709207614,0.275936746304732,0.160550589987792,0.468846746368813,0.327869890753351,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,1.21443210502468,0.292255857911312,0,0.963963949265421,0.709700426041343,1.78065603667255,0.977321756121456,0.659880491890142,0,0,0,0.565815239267694,0.590603785761546,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,1.24858172321449,0.493647061806363,0.913394847343798,1.17335854031855,0.63549621259146,0.220528398054962,0.98931751764888,1.29171541356724,0.784068024066026,1.07435109602823,0.492422699235184,0,0.556275906031529,0,0.619160603889667,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,0.432021363287205,0,0.436725127492355,0.539457385539283,0.41326727862668,0.26175594198403,0.518459893167171,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.506868376472335,0.704143431874524,0.911430693907651,0.209718688851422,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0.772758376128762,0.187682475451182,1.09890974560359,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.512200817262403,1.94485373654635,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.842773567228942,0.640251524048693,0.804096565378586,0.952587382566147,1.39061191133827,0.192909220463705,0.824171801606613,1.17759136107518,0,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.423073039458382,1.28049581010941,0.263069711437843,0.543216455383447,0,0.474540072496697,0.689531376628944,0.409231043169689,0.929621047115796,0.578719832943424,0,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0.927471342481686 | |||
|short_description=p10@Rhoj | |||
}} |
Revision as of 23:12, 12 September 2013
Short description: | p10@Rhoj |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Rhoj_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_023275, uc007nxa.1, uc007nxb.1, uc007nxc.1_5end |
EntrezGene: | Rhoj |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.47e-10 | 8 |
oligodendrocyte | 2.65e-09 | 6 |
macroglial cell | 2.65e-09 | 6 |
astrocyte | 2.65e-09 | 6 |
migratory neural crest cell | 4.41e-08 | 10 |
neuron associated cell | 4.41e-08 | 10 |
glial cell (sensu Vertebrata) | 4.41e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.41e-08 | 10 |
glial cell | 4.41e-08 | 10 |
glioblast | 4.41e-08 | 10 |
glioblast (sensu Vertebrata) | 4.41e-08 | 10 |
astrocyte of the cerebral cortex | 8.02e-08 | 2 |
astrocyte of the hippocampus | 8.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
forelimb | 8.87e-08 | 7 |
pectoral appendage | 8.87e-08 | 7 |
pectoral appendage bud | 8.87e-08 | 7 |
forelimb bud | 8.87e-08 | 7 |
forelimb/pectoral fin field | 8.87e-08 | 7 |
pectoral complex | 8.36e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.