FFCP PHASE1:Mm9::chr12:80660732..80660753,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:80660732..80660753,+|id=chr12:80660732..80660753,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-34,3;CL:0002202,3.67e-34,3;CL:0000069,3.67e-34,3;CL:0002632,3.67e-34,3;CL:0002368,3.67e-34,3;CL:0000307,3.67e-34,3;CL:0000377,3.67e-34,3;CL:0000223,2.69e-09,20;CL:0000066,1.65e-07,25;CL:0002076,2.17e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.75e-09!66;UBERON:0001041!9.43e-09!92;UBERON:0002107!4.27e-08!22;UBERON:0007499!4.27e-08!22;UBERON:0006925!4.27e-08!22;UBERON:0009497!4.27e-08!22;UBERON:0000015!4.27e-08!22;UBERON:0002423!4.27e-08!22;UBERON:0006235!4.27e-08!22;UBERON:0008835!4.27e-08!22;UBERON:0003894!4.27e-08!22;UBERON:0004161!4.27e-08!22;UBERON:0008836!4.27e-08!22;UBERON:0002365!4.83e-08!25;UBERON:0002330!4.83e-08!25;UBERON:0000077!7.15e-08!97;UBERON:0009854!1.31e-07!23;UBERON:0009856!1.31e-07!23;UBERON:0005178!1.80e-07!17;UBERON:0005181!1.80e-07!17;UBERON:0002224!1.80e-07!17;UBERON:0000915!1.80e-07!17;UBERON:0008947!1.80e-07!17;UBERON:0003258!1.80e-07!17;UBERON:0003104!4.79e-07!131;UBERON:0009142!4.79e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.67e-34,3;UBERON:0001005,3.67e-34,3;UBERON:0007196,3.67e-34,3;UBERON:0001558,3.67e-34,3;UBERON:0002107,2.86e-08,22;UBERON:0007499,2.86e-08,22;UBERON:0006925,2.86e-08,22;UBERON:0009497,2.86e-08,22;UBERON:0000015,2.86e-08,22;UBERON:0002423,2.86e-08,22;UBERON:0006235,2.86e-08,22;UBERON:0008835,2.86e-08,22;UBERON:0003894,2.86e-08,22;UBERON:0004161,2.86e-08,22;UBERON:0008836,2.86e-08,22;UBERON:0009569,3.97e-08,66;UBERON:0009854,6.31e-08,23;UBERON:0009856,6.31e-08,23;UBERON:0002365,2.55e-07,25;UBERON:0002330,2.55e-07,25;UBERON:0005177,9.14e-07,79|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,15.3708639117962,12.6679932737549,12.1325866803548,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0,1.64736847912849,4.31304619582064,1.11642284300551,0.936113019343682,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0,0.8858587585951,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,1.63934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr12:80660732..80660753,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:80660732..80660753,+ | |||
|id=chr12:80660732..80660753,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.67e-34,3;CL:0002202,3.67e-34,3;CL:0000069,3.67e-34,3;CL:0002632,3.67e-34,3;CL:0002368,3.67e-34,3;CL:0000307,3.67e-34,3;CL:0000377,3.67e-34,3;CL:0000223,2.69e-09,20;CL:0000066,1.65e-07,25;CL:0002076,2.17e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.75e-09!66;UBERON:0001041!9.43e-09!92;UBERON:0002107!4.27e-08!22;UBERON:0007499!4.27e-08!22;UBERON:0006925!4.27e-08!22;UBERON:0009497!4.27e-08!22;UBERON:0000015!4.27e-08!22;UBERON:0002423!4.27e-08!22;UBERON:0006235!4.27e-08!22;UBERON:0008835!4.27e-08!22;UBERON:0003894!4.27e-08!22;UBERON:0004161!4.27e-08!22;UBERON:0008836!4.27e-08!22;UBERON:0002365!4.83e-08!25;UBERON:0002330!4.83e-08!25;UBERON:0000077!7.15e-08!97;UBERON:0009854!1.31e-07!23;UBERON:0009856!1.31e-07!23;UBERON:0005178!1.80e-07!17;UBERON:0005181!1.80e-07!17;UBERON:0002224!1.80e-07!17;UBERON:0000915!1.80e-07!17;UBERON:0008947!1.80e-07!17;UBERON:0003258!1.80e-07!17;UBERON:0003104!4.79e-07!131;UBERON:0009142!4.79e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.67e-34,3;UBERON:0001005,3.67e-34,3;UBERON:0007196,3.67e-34,3;UBERON:0001558,3.67e-34,3;UBERON:0002107,2.86e-08,22;UBERON:0007499,2.86e-08,22;UBERON:0006925,2.86e-08,22;UBERON:0009497,2.86e-08,22;UBERON:0000015,2.86e-08,22;UBERON:0002423,2.86e-08,22;UBERON:0006235,2.86e-08,22;UBERON:0008835,2.86e-08,22;UBERON:0003894,2.86e-08,22;UBERON:0004161,2.86e-08,22;UBERON:0008836,2.86e-08,22;UBERON:0009569,3.97e-08,66;UBERON:0009854,6.31e-08,23;UBERON:0009856,6.31e-08,23;UBERON:0002365,2.55e-07,25;UBERON:0002330,2.55e-07,25;UBERON:0005177,9.14e-07,79 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,15.3708639117962,12.6679932737549,12.1325866803548,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0,1.64736847912849,4.31304619582064,1.11642284300551,0.936113019343682,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0,0.8858587585951,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,1.63934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr12:80660732..80660753,+ | |||
}} |
Revision as of 23:20, 12 September 2013
Short description: | p@chr12:80660732..80660753, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80660732..80660753, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.67e-34 | 3 |
epithelial cell of tracheobronchial tree | 3.67e-34 | 3 |
branched duct epithelial cell | 3.67e-34 | 3 |
epithelial cell of lower respiratory tract | 3.67e-34 | 3 |
respiratory epithelial cell | 3.67e-34 | 3 |
tracheal epithelial cell | 3.67e-34 | 3 |
tracheoblast | 3.67e-34 | 3 |
endodermal cell | 2.69e-09 | 20 |
epithelial cell | 1.65e-07 | 25 |
endo-epithelial cell | 2.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.67e-34 | 3 |
respiratory airway | 3.67e-34 | 3 |
tracheobronchial tree | 3.67e-34 | 3 |
lower respiratory tract | 3.67e-34 | 3 |
liver | 2.86e-08 | 22 |
epithelial sac | 2.86e-08 | 22 |
digestive gland | 2.86e-08 | 22 |
epithelium of foregut-midgut junction | 2.86e-08 | 22 |
anatomical boundary | 2.86e-08 | 22 |
hepatobiliary system | 2.86e-08 | 22 |
foregut-midgut junction | 2.86e-08 | 22 |
hepatic diverticulum | 2.86e-08 | 22 |
liver primordium | 2.86e-08 | 22 |
septum transversum | 2.86e-08 | 22 |
liver bud | 2.86e-08 | 22 |
subdivision of trunk | 3.97e-08 | 66 |
digestive tract diverticulum | 6.31e-08 | 23 |
sac | 6.31e-08 | 23 |
exocrine gland | 2.55e-07 | 25 |
exocrine system | 2.55e-07 | 25 |
trunk region element | 9.14e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.