FFCP PHASE1:Hg19::chr3:195869677..195869694,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=51bp_to_uc011btt.1_5end|coexpression_cluster_id=C46|description=CAGE_peak_1_at_uc011btt.1_5end|id=chr3:195869677..195869694,+|ontology_enrichment_celltype=CL:0000624!3.73e-07!6|ontology_enrichment_celltype_v019=CL:0000039;3.48e-09;7!CL:0000586;3.48e-09;7!CL:0000083;1.06e-07;4|ontology_enrichment_celltype_v019_2=CL:0000039,4.42e-09,7;CL:0000586,4.42e-09,7;CL:0000083,8.14e-08,4|ontology_enrichment_development_v019=UBERON:0006298;6.40e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;2.61e-08;1!DOID:326;2.61e-08;1!DOID:3978;2.61e-08;1!DOID:3394;2.61e-08;1!DOID:5844;2.61e-08;1!DOID:1036;5.88e-08;8!DOID:1799;6.40e-08;1!DOID:10165;6.40e-08;1!DOID:1798;6.40e-08;1!DOID:1793;1.06e-07;4|ontology_enrichment_disease_v019_2=DOID:178,2.35e-08,1;DOID:326,2.35e-08,1;DOID:3978,2.35e-08,1;DOID:3394,2.35e-08,1;DOID:5844,2.35e-08,1;DOID:1799,4.40e-08,1;DOID:10165,4.40e-08,1;DOID:1798,4.40e-08,1;DOID:1036,7.23e-08,8;DOID:1793,8.14e-08,4|ontology_enrichment_uberon=UBERON:0005631!1.34e-16!14;UBERON:0000158!1.34e-16!14;UBERON:0003408!4.90e-14!10;UBERON:0003124!2.21e-12!7;UBERON:0001044!2.99e-11!6;UBERON:0003293!2.99e-11!6;UBERON:0003294!2.99e-11!6;UBERON:0010047!2.99e-11!6;UBERON:0000167!2.99e-11!6;UBERON:0000166!7.74e-10!21;UBERON:0000161!9.88e-09!35;UBERON:0000478!2.19e-08!24;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0001987!9.12e-08!4;UBERON:0004340!9.12e-08!4;UBERON:0000077!1.35e-07!130;UBERON:0006562!3.41e-07!11;UBERON:0000078!9.83e-07!18|ontology_enrichment_uberon_v019=UBERON:0002372;6.40e-08;1!UBERON:0007029;6.40e-08;1!UBERON:0001736;6.40e-08;1!UBERON:0001961;6.40e-08;1!UBERON:0001744;6.40e-08;1!UBERON:0001042;6.40e-08;1!UBERON:0001735;6.40e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.83e-08,1;UBERON:0006298,3.83e-08,1;UBERON:0002372,4.11e-08,1;UBERON:0001961,4.11e-08,1;UBERON:0001744,4.11e-08,1;UBERON:0001735,4.11e-08,1;UBERON:0007029,6.63e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0,1.33749196312542,0.32592226663359,0,0,1.44833593950726,2.3568472597987,1.55073726208535,4.60366568400527,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0.728590576585084,1.48313777113772,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,12.3786807426241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.568967241427498,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.1528195219403,1.52587995496613,2.39024218228418,0.31900115973192,0.457987967009312,2.66517388009317,0,0,0.166211681900156,1.35357396370308,1.56850027454192,1.00692952185506,0.569261198172555,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93496928398135,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0,3.12882212375685,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,2.79550600698588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,1.54400723580486,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0.917142992608395,0.115525666150338,0.381382095467167,0,0,0,0,0.781514011233092,1.57144016688853,0.49131575253029,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.511049710558381,0,0,0,0,0.887023701626388,0,0,0,0,0,0.111231401892069,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,1.38251932362818,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0.0802413666891683,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0,0.303114792872958,0,0,0,0.213233981900981,0,0.581300188524055,1.1794195716213,0,0,0,0.435433495793923,0,1.68380132536469,0.358611026963382,0,0.0814032686109745,0,0,0,0,0,0,0,1.20764276154616,0|short_description=p1@uc011btt.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=51bp_to_uc011btt.1_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_1_at_uc011btt.1_5end | |||
|id=chr3:195869677..195869694,+ | |||
|ontology_enrichment_celltype=CL:0000624!3.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.48e-09;7!CL:0000586;3.48e-09;7!CL:0000083;1.06e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.42e-09,7;CL:0000586,4.42e-09,7;CL:0000083,8.14e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.61e-08;1!DOID:326;2.61e-08;1!DOID:3978;2.61e-08;1!DOID:3394;2.61e-08;1!DOID:5844;2.61e-08;1!DOID:1036;5.88e-08;8!DOID:1799;6.40e-08;1!DOID:10165;6.40e-08;1!DOID:1798;6.40e-08;1!DOID:1793;1.06e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.35e-08,1;DOID:326,2.35e-08,1;DOID:3978,2.35e-08,1;DOID:3394,2.35e-08,1;DOID:5844,2.35e-08,1;DOID:1799,4.40e-08,1;DOID:10165,4.40e-08,1;DOID:1798,4.40e-08,1;DOID:1036,7.23e-08,8;DOID:1793,8.14e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.34e-16!14;UBERON:0000158!1.34e-16!14;UBERON:0003408!4.90e-14!10;UBERON:0003124!2.21e-12!7;UBERON:0001044!2.99e-11!6;UBERON:0003293!2.99e-11!6;UBERON:0003294!2.99e-11!6;UBERON:0010047!2.99e-11!6;UBERON:0000167!2.99e-11!6;UBERON:0000166!7.74e-10!21;UBERON:0000161!9.88e-09!35;UBERON:0000478!2.19e-08!24;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0001987!9.12e-08!4;UBERON:0004340!9.12e-08!4;UBERON:0000077!1.35e-07!130;UBERON:0006562!3.41e-07!11;UBERON:0000078!9.83e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;6.40e-08;1!UBERON:0007029;6.40e-08;1!UBERON:0001736;6.40e-08;1!UBERON:0001961;6.40e-08;1!UBERON:0001744;6.40e-08;1!UBERON:0001042;6.40e-08;1!UBERON:0001735;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.83e-08,1;UBERON:0006298,3.83e-08,1;UBERON:0002372,4.11e-08,1;UBERON:0001961,4.11e-08,1;UBERON:0001744,4.11e-08,1;UBERON:0001735,4.11e-08,1;UBERON:0007029,6.63e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0,1.33749196312542,0.32592226663359,0,0,1.44833593950726,2.3568472597987,1.55073726208535,4.60366568400527,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0.728590576585084,1.48313777113772,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,12.3786807426241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.568967241427498,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.1528195219403,1.52587995496613,2.39024218228418,0.31900115973192,0.457987967009312,2.66517388009317,0,0,0.166211681900156,1.35357396370308,1.56850027454192,1.00692952185506,0.569261198172555,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93496928398135,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0,3.12882212375685,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,2.79550600698588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,1.54400723580486,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0.917142992608395,0.115525666150338,0.381382095467167,0,0,0,0,0.781514011233092,1.57144016688853,0.49131575253029,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.511049710558381,0,0,0,0,0.887023701626388,0,0,0,0,0,0.111231401892069,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,1.38251932362818,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0.0802413666891683,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0,0.303114792872958,0,0,0,0.213233981900981,0,0.581300188524055,1.1794195716213,0,0,0,0.435433495793923,0,1.68380132536469,0.358611026963382,0,0.0814032686109745,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p1@uc011btt.1 | |||
}} |
Revision as of 23:31, 12 September 2013
Short description: | p1@uc011btt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc011btt.1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 51bp_to_uc011btt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.42e-09 | 7 |
germ cell | 4.42e-09 | 7 |
epithelial cell of pancreas | 8.14e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.83e-08 | 1 |
submandibular gland primordium | 3.83e-08 | 1 |
tonsil | 4.11e-08 | 1 |
mucosa-associated lymphoid tissue | 4.11e-08 | 1 |
lymphoid tissue | 4.11e-08 | 1 |
tonsillar ring | 4.11e-08 | 1 |
surface | 6.63e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.35e-08 | 1 |
ischemia | 2.35e-08 | 1 |
extrinsic cardiomyopathy | 2.35e-08 | 1 |
myocardial ischemia | 2.35e-08 | 1 |
myocardial infarction | 2.35e-08 | 1 |
islet cell tumor | 4.40e-08 | 1 |
endocrine pancreas cancer | 4.40e-08 | 1 |
pancreatic endocrine carcinoma | 4.40e-08 | 1 |
chronic leukemia | 7.23e-08 | 8 |
pancreatic cancer | 8.14e-08 | 4 |
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