FFCP PHASE1:Mm9::chr13:19433685..19433696,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=50|UniProt=A2J011|association_with_transcript=-320bp_to_uc007poy.1,uc007poz.1_5end|description=CAGE_peak_6_at_uc007poy.1_5end,CAGE_peak_6_at_uc007poz.1_5end|id=chr13:19433685..19433696,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0000838,8.07e-11,12;CL:0000542,4.49e-10,13;CL:0000051,4.49e-10,13;CL:0000738,5.82e-08,17;CL:0002087,5.82e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.76e-17!23;UBERON:0000974!2.76e-17!23;UBERON:0004807!2.76e-17!23;UBERON:0005058!2.76e-17!23;UBERON:0003351!2.76e-17!23;UBERON:0009113!2.76e-17!23;UBERON:0003295!2.76e-17!23;UBERON:0009722!2.76e-17!23;UBERON:0005562!2.76e-17!23;UBERON:0007690!2.76e-17!23;UBERON:0006562!2.09e-16!24;UBERON:0003408!2.09e-16!24;UBERON:0001557!2.09e-16!24;UBERON:0001042!2.09e-16!24;UBERON:0008814!2.09e-16!24;UBERON:0009145!2.09e-16!24;UBERON:0004177!9.21e-15!29;UBERON:0000072!3.68e-14!27;UBERON:0002193!4.71e-14!48;UBERON:0000065!4.37e-12!41;UBERON:0002390!5.63e-12!45;UBERON:0003061!5.63e-12!45;UBERON:0000063!9.05e-12!35;UBERON:0001004!1.08e-11!42;UBERON:0002405!5.24e-08!70;UBERON:0005057!9.84e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0,0,27.3050115802435,21.6795824985316,0.319984845586813,0,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.909445760844565,0.358053391334963,0.596044064343795,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.302478555410522,0.38983152295901,0.288635524920988,0.350630706544707,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p6@uc007poy.1,p6@uc007poz.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=A2J011 | |||
|association_with_transcript=-320bp_to_uc007poy.1,uc007poz.1_5end | |||
|description=CAGE_peak_6_at_uc007poy.1_5end,CAGE_peak_6_at_uc007poz.1_5end | |||
|id=chr13:19433685..19433696,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0000838,8.07e-11,12;CL:0000542,4.49e-10,13;CL:0000051,4.49e-10,13;CL:0000738,5.82e-08,17;CL:0002087,5.82e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.76e-17!23;UBERON:0000974!2.76e-17!23;UBERON:0004807!2.76e-17!23;UBERON:0005058!2.76e-17!23;UBERON:0003351!2.76e-17!23;UBERON:0009113!2.76e-17!23;UBERON:0003295!2.76e-17!23;UBERON:0009722!2.76e-17!23;UBERON:0005562!2.76e-17!23;UBERON:0007690!2.76e-17!23;UBERON:0006562!2.09e-16!24;UBERON:0003408!2.09e-16!24;UBERON:0001557!2.09e-16!24;UBERON:0001042!2.09e-16!24;UBERON:0008814!2.09e-16!24;UBERON:0009145!2.09e-16!24;UBERON:0004177!9.21e-15!29;UBERON:0000072!3.68e-14!27;UBERON:0002193!4.71e-14!48;UBERON:0000065!4.37e-12!41;UBERON:0002390!5.63e-12!45;UBERON:0003061!5.63e-12!45;UBERON:0000063!9.05e-12!35;UBERON:0001004!1.08e-11!42;UBERON:0002405!5.24e-08!70;UBERON:0005057!9.84e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-29,1;UBERON:0001097,1.10e-29,1;UBERON:0003968,1.10e-29,1;UBERON:0001467,1.10e-29,1;UBERON:0002465,7.15e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0,0,27.3050115802435,21.6795824985316,0.319984845586813,0,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.909445760844565,0.358053391334963,0.596044064343795,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.302478555410522,0.38983152295901,0.288635524920988,0.350630706544707,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@uc007poy.1,p6@uc007poz.1 | |||
}} |
Revision as of 00:05, 13 September 2013
Short description: | p6@uc007poy.1, p6@uc007poz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_uc007poy.1_5end, CAGE_peak_6_at_uc007poz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -320bp_to_uc007poy.1, uc007poz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.07e-11 | 11 |
pro-T cell | 1.07e-11 | 11 |
lymphoid lineage restricted progenitor cell | 8.07e-11 | 12 |
lymphocyte | 4.49e-10 | 13 |
common lymphoid progenitor | 4.49e-10 | 13 |
leukocyte | 5.82e-08 | 17 |
nongranular leukocyte | 5.82e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.10e-29 | 1 |
axillary lymph node | 1.10e-29 | 1 |
peripheral lymph node | 1.10e-29 | 1 |
shoulder | 1.10e-29 | 1 |
lymphoid system | 7.15e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.