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FFCP PHASE1:Mm9::chr14:30822136..30822147,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=218865|HGNC=|MCL_coexpression_id=8|UniProt=Q3TPY4,Q8BJ64|association_with_transcript=-38bp_to_NM_001136240,uc007sup.2_5end|description=CAGE_peak_8_at_Chdh_5end|id=chr14:30822136..30822147,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.89e-11,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.83e-12!22;UBERON:0007499!3.83e-12!22;UBERON:0006925!3.83e-12!22;UBERON:0009497!3.83e-12!22;UBERON:0000015!3.83e-12!22;UBERON:0002423!3.83e-12!22;UBERON:0006235!3.83e-12!22;UBERON:0008835!3.83e-12!22;UBERON:0003894!3.83e-12!22;UBERON:0004161!3.83e-12!22;UBERON:0008836!3.83e-12!22;UBERON:0009854!3.06e-11!23;UBERON:0009856!3.06e-11!23;UBERON:0002365!6.02e-11!25;UBERON:0002330!6.02e-11!25;UBERON:0005172!2.46e-07!49;UBERON:0005173!2.46e-07!49;UBERON:0002417!2.46e-07!49;UBERON:0000916!2.46e-07!49;UBERON:0003929!9.77e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.11e-34,22;UBERON:0007499,1.11e-34,22;UBERON:0006925,1.11e-34,22;UBERON:0009497,1.11e-34,22;UBERON:0000015,1.11e-34,22;UBERON:0002423,1.11e-34,22;UBERON:0006235,1.11e-34,22;UBERON:0008835,1.11e-34,22;UBERON:0003894,1.11e-34,22;UBERON:0004161,1.11e-34,22;UBERON:0008836,1.11e-34,22;UBERON:0009854,4.98e-33,23;UBERON:0009856,4.98e-33,23;UBERON:0002365,4.06e-30,25;UBERON:0002330,4.06e-30,25;UBERON:0005172,2.11e-22,49;UBERON:0005173,2.11e-22,49;UBERON:0002417,2.11e-22,49;UBERON:0000916,2.11e-22,49;UBERON:0003104,3.52e-17,61;UBERON:0009142,3.52e-17,61;UBERON:0003914,2.34e-16,47;UBERON:0009569,1.46e-15,66;UBERON:0005256,3.14e-15,45;UBERON:0003929,1.64e-13,55;UBERON:0005177,2.57e-12,79;UBERON:0000490,1.15e-10,66;UBERON:0002368,1.40e-10,60;UBERON:0002100,2.66e-10,90;UBERON:0005911,4.79e-10,69;UBERON:0002530,1.65e-09,65;UBERON:0000949,2.91e-08,72;UBERON:0001041,4.16e-07,80|phase1_expression=0.160148847104794,0,0,0,1.50268718983904,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0.878744730937887,3.11087838518853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,0.383062014255563,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,4.0798280022465,5.93673510801599,3.89865850468601,5.37632264516803,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.82694207550496,0,0,0,0,0,0,0,0.376999773989026,0.247194967734374,1.3013942122792,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0.239630249011841,1.79970819298022,0.254140454146129,0,0,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0.407357455401265,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,1.39120381673366,2.21415221969403,3.767969468193,4.81248939295022,4.44678940630723,0,0,0,0.202860121388503,1.4470629585145,1.2731292589071,1.72617682470486,1.45921704097532,3.29473695825698,5.75072826109418,4.83783231969054,5.92871578917665,5.80931419278357,3.58794827043824,3.85954817090694,0,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0.160550589987792,0.586058432961016,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0,0.325773918707152,1.31976098378028,0,0,0,0,0,0,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0.218362563746178,0.269728692769641,0.991841468704031,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0.579568782096571,0,0.915758121336325,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0,0.320125762024346,0.287177344778066,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.592302255241736,0.182927972872773,0,0,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0.231867835620421|short_description=p8@Chdh}}
|EntrezGene=218865
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q3TPY4,Q8BJ64
|association_with_transcript=-38bp_to_NM_001136240,uc007sup.2_5end
|description=CAGE_peak_8_at_Chdh_5end
|id=chr14:30822136..30822147,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,3.89e-11,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!3.83e-12!22;UBERON:0007499!3.83e-12!22;UBERON:0006925!3.83e-12!22;UBERON:0009497!3.83e-12!22;UBERON:0000015!3.83e-12!22;UBERON:0002423!3.83e-12!22;UBERON:0006235!3.83e-12!22;UBERON:0008835!3.83e-12!22;UBERON:0003894!3.83e-12!22;UBERON:0004161!3.83e-12!22;UBERON:0008836!3.83e-12!22;UBERON:0009854!3.06e-11!23;UBERON:0009856!3.06e-11!23;UBERON:0002365!6.02e-11!25;UBERON:0002330!6.02e-11!25;UBERON:0005172!2.46e-07!49;UBERON:0005173!2.46e-07!49;UBERON:0002417!2.46e-07!49;UBERON:0000916!2.46e-07!49;UBERON:0003929!9.77e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.11e-34,22;UBERON:0007499,1.11e-34,22;UBERON:0006925,1.11e-34,22;UBERON:0009497,1.11e-34,22;UBERON:0000015,1.11e-34,22;UBERON:0002423,1.11e-34,22;UBERON:0006235,1.11e-34,22;UBERON:0008835,1.11e-34,22;UBERON:0003894,1.11e-34,22;UBERON:0004161,1.11e-34,22;UBERON:0008836,1.11e-34,22;UBERON:0009854,4.98e-33,23;UBERON:0009856,4.98e-33,23;UBERON:0002365,4.06e-30,25;UBERON:0002330,4.06e-30,25;UBERON:0005172,2.11e-22,49;UBERON:0005173,2.11e-22,49;UBERON:0002417,2.11e-22,49;UBERON:0000916,2.11e-22,49;UBERON:0003104,3.52e-17,61;UBERON:0009142,3.52e-17,61;UBERON:0003914,2.34e-16,47;UBERON:0009569,1.46e-15,66;UBERON:0005256,3.14e-15,45;UBERON:0003929,1.64e-13,55;UBERON:0005177,2.57e-12,79;UBERON:0000490,1.15e-10,66;UBERON:0002368,1.40e-10,60;UBERON:0002100,2.66e-10,90;UBERON:0005911,4.79e-10,69;UBERON:0002530,1.65e-09,65;UBERON:0000949,2.91e-08,72;UBERON:0001041,4.16e-07,80
|phase1_expression=0.160148847104794,0,0,0,1.50268718983904,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0.878744730937887,3.11087838518853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,0.383062014255563,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,4.0798280022465,5.93673510801599,3.89865850468601,5.37632264516803,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.82694207550496,0,0,0,0,0,0,0,0.376999773989026,0.247194967734374,1.3013942122792,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0.239630249011841,1.79970819298022,0.254140454146129,0,0,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0.407357455401265,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,1.39120381673366,2.21415221969403,3.767969468193,4.81248939295022,4.44678940630723,0,0,0,0.202860121388503,1.4470629585145,1.2731292589071,1.72617682470486,1.45921704097532,3.29473695825698,5.75072826109418,4.83783231969054,5.92871578917665,5.80931419278357,3.58794827043824,3.85954817090694,0,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0.160550589987792,0.586058432961016,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0,0.325773918707152,1.31976098378028,0,0,0,0,0,0,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0.218362563746178,0.269728692769641,0.991841468704031,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0.579568782096571,0,0.915758121336325,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0,0.320125762024346,0.287177344778066,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.592302255241736,0.182927972872773,0,0,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0.231867835620421
|short_description=p8@Chdh
}}

Revision as of 01:55, 13 September 2013

Short description:p8@Chdh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Chdh_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -38bp_to_NM_001136240, uc007sup.2_5end
EntrezGene:Chdh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Chdh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte3.89e-115

Uber anatomy
Ontology termp-valuen
liver1.11e-3422
epithelial sac1.11e-3422
digestive gland1.11e-3422
epithelium of foregut-midgut junction1.11e-3422
anatomical boundary1.11e-3422
hepatobiliary system1.11e-3422
foregut-midgut junction1.11e-3422
hepatic diverticulum1.11e-3422
liver primordium1.11e-3422
septum transversum1.11e-3422
liver bud1.11e-3422
digestive tract diverticulum4.98e-3323
sac4.98e-3323
exocrine gland4.06e-3025
exocrine system4.06e-3025
abdomen element2.11e-2249
abdominal segment element2.11e-2249
abdominal segment of trunk2.11e-2249
abdomen2.11e-2249
mesenchyme3.52e-1761
entire embryonic mesenchyme3.52e-1761
epithelial tube2.34e-1647
subdivision of trunk1.46e-1566
trunk mesenchyme3.14e-1545
gut epithelium1.64e-1355
trunk region element2.57e-1279
unilaminar epithelium1.15e-1066
endocrine gland1.40e-1060
trunk2.66e-1090
endo-epithelium4.79e-1069
gland1.65e-0965
endocrine system2.91e-0872
foregut4.16e-0780







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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