FFCP PHASE1:Mm9::chr14:30822262..30822278,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=218865|HGNC=|MCL_coexpression_id=24|UniProt=F8WIG7|association_with_transcript=-9bp_to_ENSMUST00000022556_5end|description=CAGE_peak_3_at_Chdh_5end|id=chr14:30822262..30822278,+|ontology_enrichment_celltype=CL:0002563!3.50e-07!9;CL:0002251!3.50e-07!9;CL:0000066!7.83e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-10,25;CL:0002563,4.26e-10,9;CL:0002251,4.26e-10,9;CL:0000223,8.99e-09,20;CL:0000239,2.67e-08,6;CL:0000677,2.67e-08,6;CL:0000584,2.67e-08,6;CL:0000075,7.01e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.29e-18!130;UBERON:0000925!1.29e-18!130;UBERON:0006595!1.29e-18!130;UBERON:0001007!8.24e-18!128;UBERON:0001555!8.24e-18!128;UBERON:0007026!8.24e-18!128;UBERON:0004921!1.35e-16!126;UBERON:0004185!1.35e-16!126;UBERON:0000160!1.53e-15!43;UBERON:0003929!1.18e-11!55;UBERON:0005409!4.77e-11!59;UBERON:0000344!1.07e-10!15;UBERON:0002365!1.28e-09!25;UBERON:0002330!1.28e-09!25;UBERON:0001242!2.41e-09!13;UBERON:0000060!2.41e-09!13;UBERON:0001262!2.41e-09!13;UBERON:0004786!2.41e-09!13;UBERON:0009854!5.95e-09!23;UBERON:0009856!5.95e-09!23;UBERON:0005911!6.21e-09!69;UBERON:0002107!1.35e-08!22;UBERON:0007499!1.35e-08!22;UBERON:0006925!1.35e-08!22;UBERON:0009497!1.35e-08!22;UBERON:0000015!1.35e-08!22;UBERON:0002423!1.35e-08!22;UBERON:0006235!1.35e-08!22;UBERON:0008835!1.35e-08!22;UBERON:0003894!1.35e-08!22;UBERON:0004161!1.35e-08!22;UBERON:0008836!1.35e-08!22;UBERON:0007023!5.26e-08!51;UBERON:0000490!2.62e-07!66;UBERON:0003350!3.50e-07!9;UBERON:0004808!3.50e-07!9;UBERON:0001277!3.50e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.04e-16,31;UBERON:0000344,2.04e-15,15;UBERON:0001242,2.28e-13,13;UBERON:0001262,2.28e-13,13;UBERON:0004786,2.28e-13,13;UBERON:0004119,6.20e-13,118;UBERON:0000925,6.20e-13,118;UBERON:0006595,6.20e-13,118;UBERON:0002365,2.22e-12,25;UBERON:0002330,2.22e-12,25;UBERON:0001007,4.47e-12,116;UBERON:0001555,4.47e-12,116;UBERON:0007026,4.47e-12,116;UBERON:0004923,1.98e-11,24;UBERON:0009854,2.23e-11,23;UBERON:0009856,2.23e-11,23;UBERON:0002107,7.54e-11,22;UBERON:0007499,7.54e-11,22;UBERON:0006925,7.54e-11,22;UBERON:0009497,7.54e-11,22;UBERON:0000015,7.54e-11,22;UBERON:0002423,7.54e-11,22;UBERON:0006235,7.54e-11,22;UBERON:0008835,7.54e-11,22;UBERON:0003894,7.54e-11,22;UBERON:0004161,7.54e-11,22;UBERON:0008836,7.54e-11,22;UBERON:0004921,8.12e-11,114;UBERON:0005409,1.62e-10,47;UBERON:0003929,2.07e-10,55;UBERON:0003350,4.26e-10,9;UBERON:0004808,4.26e-10,9;UBERON:0001277,4.26e-10,9;UBERON:0000485,9.23e-08,11;UBERON:0007023,1.14e-07,51;UBERON:0000490,3.68e-07,66;UBERON:0005172,7.63e-07,49;UBERON:0005173,7.63e-07,49;UBERON:0002417,7.63e-07,49;UBERON:0000916,7.63e-07,49|phase1_expression=0,22.3344260889191,26.3899558845931,35.3883127228991,28.0501608769954,10.5763941304491,9.57811826441655,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0,0,0,1.7008658030214,0,0,8.63959083084396,9.1763712426868,17.2269589234506,14.2151458732495,9.9116767035509,6.84084310042946,7.56090389279792,2.21730510655305,0,0,0,4.04392267651784,2.65975432573588,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,0,0,6.66688324013859,5.16254326188832,7.47968467078526,4.85732872474035,5.84798775702902,16.1289679355041,3.23022166303029,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,6.62266502370548,0.258937883647172,0,0,0,0.230615497256059,0,0,0,10.3821886448437,1.01219549843938,0,0.161766849947409,0,0,1.86391761218122,0,0,6.38642638021478,0.479260498023681,0,0.127070227073065,0,0.915001205637253,0,0,0,0.41557608911912,0.162241263067758,0.916554274652847,1.49288364732112,4.80173241023982,5.89237196482127,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,6.27795687669216,7.93351699990633,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.760902504450237,7.11793592316767,1.15289268306808,2.26201687920243,1.98956472041151,2.33956904542944,8.08937467788799,4.75503709724327,6.17337947088538,0,0,0,0.407302655690628,0.581857461502877,1.26244475802573,3.16182685621286,6.05201606716369,6.75094529717912,9.99517027766584,11.858105083486,0,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,4.02774592431135,4.53978634970099,5.21666685057355,5.75072826109418,10.7920874823866,5.30464044294753,6.31447194867779,6.63770430031075,7.71909634181387,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,1.96705709207614,1.10374698521893,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.84522110770749,2.31485284767432,0.81443479676788,6.10389454998381,3.98235415019888,0,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,1.55056975900933,2.54473610634254,1.42598951353889,1.58018378967908,3.16255825724996,6.18813259489121,1.36175842301515,0,0,0,0,0,0,0,2.11204537257339,1.27099242518292,1.54369878638473,0.49465875882444,0.968786560175433,1.08563264870681,0.596861720015682,1.47726809770555,6.70405924248657,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.944050424693745,1.65306911450672,2.35580347785627,3.11075935900303,2.4853572523477,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.2604087696879,0,0.241584120826006,0,0.948033361884535,0,0.513554785824136,0.649604114888975,1.25318686967237,0.993406773906324,0.961563596159751,0.738447635872886,0.706765149637033,0.762068066549998,0.907435666231565,1.07203668813728,1.05833025804362,1.75315353272353,0.453460767230423,0,0,0.335769232728157,0.19318959403219,6.00583921443782,10.9890974560359,1.92931541171159,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.561849044819294,0.384150914429216,0.402048282689293,0,0.579421629724277,0.964546102318525,0.824171801606613,0.147198920134397,0.685738504770831,0.70990322463735,0.953744759789284,0.290692833264657,0.846984423737976,0.169229215783353,1.28049581010941,0.263069711437843,0.271608227691724,0,0.118635018124174,0.886540341380071,0,0.619747364743864,0.964533054905707,0,1.87145286756327,0.644613162144895,0,0,0|short_description=p3@Chdh}} | ||
|EntrezGene=218865 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=F8WIG7 | |||
|association_with_transcript=-9bp_to_ENSMUST00000022556_5end | |||
|description=CAGE_peak_3_at_Chdh_5end | |||
|id=chr14:30822262..30822278,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.50e-07!9;CL:0002251!3.50e-07!9;CL:0000066!7.83e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-10,25;CL:0002563,4.26e-10,9;CL:0002251,4.26e-10,9;CL:0000223,8.99e-09,20;CL:0000239,2.67e-08,6;CL:0000677,2.67e-08,6;CL:0000584,2.67e-08,6;CL:0000075,7.01e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.29e-18!130;UBERON:0000925!1.29e-18!130;UBERON:0006595!1.29e-18!130;UBERON:0001007!8.24e-18!128;UBERON:0001555!8.24e-18!128;UBERON:0007026!8.24e-18!128;UBERON:0004921!1.35e-16!126;UBERON:0004185!1.35e-16!126;UBERON:0000160!1.53e-15!43;UBERON:0003929!1.18e-11!55;UBERON:0005409!4.77e-11!59;UBERON:0000344!1.07e-10!15;UBERON:0002365!1.28e-09!25;UBERON:0002330!1.28e-09!25;UBERON:0001242!2.41e-09!13;UBERON:0000060!2.41e-09!13;UBERON:0001262!2.41e-09!13;UBERON:0004786!2.41e-09!13;UBERON:0009854!5.95e-09!23;UBERON:0009856!5.95e-09!23;UBERON:0005911!6.21e-09!69;UBERON:0002107!1.35e-08!22;UBERON:0007499!1.35e-08!22;UBERON:0006925!1.35e-08!22;UBERON:0009497!1.35e-08!22;UBERON:0000015!1.35e-08!22;UBERON:0002423!1.35e-08!22;UBERON:0006235!1.35e-08!22;UBERON:0008835!1.35e-08!22;UBERON:0003894!1.35e-08!22;UBERON:0004161!1.35e-08!22;UBERON:0008836!1.35e-08!22;UBERON:0007023!5.26e-08!51;UBERON:0000490!2.62e-07!66;UBERON:0003350!3.50e-07!9;UBERON:0004808!3.50e-07!9;UBERON:0001277!3.50e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.04e-16,31;UBERON:0000344,2.04e-15,15;UBERON:0001242,2.28e-13,13;UBERON:0001262,2.28e-13,13;UBERON:0004786,2.28e-13,13;UBERON:0004119,6.20e-13,118;UBERON:0000925,6.20e-13,118;UBERON:0006595,6.20e-13,118;UBERON:0002365,2.22e-12,25;UBERON:0002330,2.22e-12,25;UBERON:0001007,4.47e-12,116;UBERON:0001555,4.47e-12,116;UBERON:0007026,4.47e-12,116;UBERON:0004923,1.98e-11,24;UBERON:0009854,2.23e-11,23;UBERON:0009856,2.23e-11,23;UBERON:0002107,7.54e-11,22;UBERON:0007499,7.54e-11,22;UBERON:0006925,7.54e-11,22;UBERON:0009497,7.54e-11,22;UBERON:0000015,7.54e-11,22;UBERON:0002423,7.54e-11,22;UBERON:0006235,7.54e-11,22;UBERON:0008835,7.54e-11,22;UBERON:0003894,7.54e-11,22;UBERON:0004161,7.54e-11,22;UBERON:0008836,7.54e-11,22;UBERON:0004921,8.12e-11,114;UBERON:0005409,1.62e-10,47;UBERON:0003929,2.07e-10,55;UBERON:0003350,4.26e-10,9;UBERON:0004808,4.26e-10,9;UBERON:0001277,4.26e-10,9;UBERON:0000485,9.23e-08,11;UBERON:0007023,1.14e-07,51;UBERON:0000490,3.68e-07,66;UBERON:0005172,7.63e-07,49;UBERON:0005173,7.63e-07,49;UBERON:0002417,7.63e-07,49;UBERON:0000916,7.63e-07,49 | |||
|phase1_expression=0,22.3344260889191,26.3899558845931,35.3883127228991,28.0501608769954,10.5763941304491,9.57811826441655,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0,0,0,0,0,0,0,1.7008658030214,0,0,8.63959083084396,9.1763712426868,17.2269589234506,14.2151458732495,9.9116767035509,6.84084310042946,7.56090389279792,2.21730510655305,0,0,0,4.04392267651784,2.65975432573588,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,0,0,6.66688324013859,5.16254326188832,7.47968467078526,4.85732872474035,5.84798775702902,16.1289679355041,3.23022166303029,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,6.62266502370548,0.258937883647172,0,0,0,0.230615497256059,0,0,0,10.3821886448437,1.01219549843938,0,0.161766849947409,0,0,1.86391761218122,0,0,6.38642638021478,0.479260498023681,0,0.127070227073065,0,0.915001205637253,0,0,0,0.41557608911912,0.162241263067758,0.916554274652847,1.49288364732112,4.80173241023982,5.89237196482127,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,6.27795687669216,7.93351699990633,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.760902504450237,7.11793592316767,1.15289268306808,2.26201687920243,1.98956472041151,2.33956904542944,8.08937467788799,4.75503709724327,6.17337947088538,0,0,0,0.407302655690628,0.581857461502877,1.26244475802573,3.16182685621286,6.05201606716369,6.75094529717912,9.99517027766584,11.858105083486,0,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,4.02774592431135,4.53978634970099,5.21666685057355,5.75072826109418,10.7920874823866,5.30464044294753,6.31447194867779,6.63770430031075,7.71909634181387,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,1.96705709207614,1.10374698521893,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.84522110770749,2.31485284767432,0.81443479676788,6.10389454998381,3.98235415019888,0,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,1.55056975900933,2.54473610634254,1.42598951353889,1.58018378967908,3.16255825724996,6.18813259489121,1.36175842301515,0,0,0,0,0,0,0,2.11204537257339,1.27099242518292,1.54369878638473,0.49465875882444,0.968786560175433,1.08563264870681,0.596861720015682,1.47726809770555,6.70405924248657,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.944050424693745,1.65306911450672,2.35580347785627,3.11075935900303,2.4853572523477,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.2604087696879,0,0.241584120826006,0,0.948033361884535,0,0.513554785824136,0.649604114888975,1.25318686967237,0.993406773906324,0.961563596159751,0.738447635872886,0.706765149637033,0.762068066549998,0.907435666231565,1.07203668813728,1.05833025804362,1.75315353272353,0.453460767230423,0,0,0.335769232728157,0.19318959403219,6.00583921443782,10.9890974560359,1.92931541171159,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.561849044819294,0.384150914429216,0.402048282689293,0,0.579421629724277,0.964546102318525,0.824171801606613,0.147198920134397,0.685738504770831,0.70990322463735,0.953744759789284,0.290692833264657,0.846984423737976,0.169229215783353,1.28049581010941,0.263069711437843,0.271608227691724,0,0.118635018124174,0.886540341380071,0,0.619747364743864,0.964533054905707,0,1.87145286756327,0.644613162144895,0,0,0 | |||
|short_description=p3@Chdh | |||
}} |
Revision as of 01:55, 13 September 2013
Short description: | p3@Chdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -9bp_to_ENSMUST00000022556_5end |
EntrezGene: | Chdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.16e-10 | 25 |
intestinal epithelial cell | 4.26e-10 | 9 |
epithelial cell of alimentary canal | 4.26e-10 | 9 |
endodermal cell | 8.99e-09 | 20 |
brush border epithelial cell | 2.67e-08 | 6 |
gut absorptive cell | 2.67e-08 | 6 |
enterocyte | 2.67e-08 | 6 |
columnar/cuboidal epithelial cell | 7.01e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.