FFCP PHASE1:Mm9::chr14:31832190..31832228,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30877|HGNC=|MCL_coexpression_id=101|UniProt=Q8CI11|association_with_transcript=46bp_to_ENSMUST00000037739,NM_153547,uc007swi.2,uc007swj.2_5end|description=CAGE_peak_1_at_Gnl3_5end|id=chr14:31832190..31832228,-|ontology_enrichment_celltype=CL:0000988!4.20e-11!32;CL:0002032!4.20e-11!32;CL:0000037!4.20e-11!32;CL:0000566!4.20e-11!32;CL:0000837!4.20e-11!32;CL:0000542!8.19e-09!13;CL:0000051!8.19e-09!13;CL:0000838!2.00e-08!12;CL:0000084!9.00e-08!11;CL:0000827!9.00e-08!11;CL:0002031!2.21e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,4.20e-11,32;CL:0002032,4.20e-11,32;CL:0000037,4.20e-11,32;CL:0000837,4.20e-11,32;CL:0000542,8.19e-09,13;CL:0000051,8.19e-09,13;CL:0000838,2.00e-08,12;CL:0000084,9.00e-08,11;CL:0000827,9.00e-08,11;CL:0002031,2.21e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!6.52e-09!51;UBERON:0002405!1.80e-08!70;UBERON:0000949!2.00e-07!72;UBERON:0001041!4.23e-07!92;UBERON:0000077!4.69e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0000949,2.00e-07,72|phase1_expression=31.869620573854,8.37540978334467,7.27998783023258,3.93203474698879,6.01074875935617,53.5534877398928,49.5258798062514,61.7209486050735,555.270720166174,559.180153383242,429.757100246018,346.849347311723,74.6435182500057,77.1922153359747,61.2921961740819,91.1138703254217,60.8618833971488,60.2532735834234,69.791246705321,56.01943403734,21.8561255688249,122.624324733093,167.429064838058,32.4784618270616,27.5291137280604,14.9300310669905,18.9535278309993,28.8731451799091,18.0522248483555,25.7070732355129,42.7939885564738,72.393496774398,73.1927097225638,31.6963362030877,84.3446729673722,74.97182505668,84.1177747800961,7.95210098400125,7.813353445238,10.470474879476,4.1176204162171,2.73218193983378,3.88408282424923,65.4663453473002,67.7197900546357,62.22234898281,2.34717403304412,4.14247797122848,2.63623419281366,4.08302788055995,3.63964696225943,1.43752564364972,134.058302240131,92.8463541774521,104.189077734164,33.4437266846731,33.8109459127733,23.7209162447623,6.06949382578793,5.28990979272033,3.80298842103708,7.11573517345177,1.77858959222228,7.19919773825119,11.8663963508037,4.9733608046227,3.29560121570245,3.84218305321555,12.7538223139428,6.07526722492608,9.04397333810943,6.28432165688368,7.28866185140325,11.7591167246356,7.95517409451362,11.9498442259303,9.91042928994498,19.025413374693,17.664751324468,5.01167893374737,5.48925861614458,10.4182674111352,9.77140496504833,10.1297269805702,16.3494125121187,16.2045722010517,20.786265396669,13.9799584368975,99.2770394598043,52.144376473682,53.3350659211087,38.7190744641624,106.755499392117,20.5087212822371,24.6915038630114,41.6665005000522,41.290659518735,36.9833799994385,29.8753905293299,27.9138263863169,26.901093177346,26.9485602570067,12.7402619853323,7.11066703153331,46.545573817411,49.1518139021691,50.5524445014783,33.6842445171227,69.9132285847364,40.8215882428268,54.8213632580989,37.7537193107055,40.3577120198102,36.9270469353925,50.9159101897602,20.8606541607261,34.1129055473436,31.6672591654607,58.3842964286917,54.5154284322769,49.2476586166678,64.9732839201198,26.0948465705371,19.6163133997737,17.1746299587033,28.3557331281536,104.598603693668,122.980059853649,92.7612657633372,23.3673397471523,22.8750301409313,35.6858360000535,24.1615805067264,27.872984849006,24.3112012134685,28.2299797737898,43.1798902725341,38.1929399772986,33.6121268716787,20.8337437327609,52.5686589569323,40.4627703802912,40.5139792062036,39.6353670907931,34.2223590731179,35.7437279594731,22.113606996096,21.7310831420773,33.1974709116577,55.0298693288354,44.5156344134791,53.4837587123283,51.9948356051868,56.0685988100688,52.2686626476176,51.1518065723527,123.589520967129,141.284001005979,82.975741823513,44.7391668676684,42.6837429165595,41.9544603204165,40.0098603139005,28.1372851398787,36.4070386414213,30.4619467623034,32.1928081679543,33.745183944112,30.1144525341669,19.7000956894914,17.0244500046297,18.1287984407412,22.3941117596872,17.0442151825672,23.9730541363105,35.1933774337153,7.93005079161115,39.9320355661952,69.9585461755567,64.5617947772019,77.4493442545781,56.6730704191593,49.5903037774061,36.5233202136114,24.2009821387701,33.1044898995262,30.4115602648326,23.8747766449381,30.6093616777019,28.7622210769351,22.9106332867176,23.8969527905241,31.6745394591646,60.3232146579368,66.4975640471175,53.3566478954723,43.6393096127158,43.0633934126556,23.840174495845,19.7797598292667,18.0548537017581,18.5095745882701,57.2153570278197,109.78407956119,105.55218037579,100.51336423603,71.81248297153,78.6237540792879,58.818571761508,62.1423656893751,85.2831292836686,58.2070195958733,93.4493342427805,44.6569137202204,34.6361817157162,43.4435670069032,39.8262258018645,35.2183770595258,19.7685913478267,68.406399649145,66.4897103883466,55.1671528769361,41.5401739470649,22.2783322397615,18.5674039891091,15.6106918286239,26.1674339216277,21.9250042752287,17.6994793209811,16.3863314715738,18.3046080777849,13.5970115066621,58.8086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| ||
|EntrezGene=30877 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|UniProt=Q8CI11 | |||
|association_with_transcript=46bp_to_ENSMUST00000037739,NM_153547,uc007swi.2,uc007swj.2_5end | |||
|description=CAGE_peak_1_at_Gnl3_5end | |||
|id=chr14:31832190..31832228,- | |||
|ontology_enrichment_celltype=CL:0000988!4.20e-11!32;CL:0002032!4.20e-11!32;CL:0000037!4.20e-11!32;CL:0000566!4.20e-11!32;CL:0000837!4.20e-11!32;CL:0000542!8.19e-09!13;CL:0000051!8.19e-09!13;CL:0000838!2.00e-08!12;CL:0000084!9.00e-08!11;CL:0000827!9.00e-08!11;CL:0002031!2.21e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.20e-11,32;CL:0002032,4.20e-11,32;CL:0000037,4.20e-11,32;CL:0000837,4.20e-11,32;CL:0000542,8.19e-09,13;CL:0000051,8.19e-09,13;CL:0000838,2.00e-08,12;CL:0000084,9.00e-08,11;CL:0000827,9.00e-08,11;CL:0002031,2.21e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.52e-09!51;UBERON:0002405!1.80e-08!70;UBERON:0000949!2.00e-07!72;UBERON:0001041!4.23e-07!92;UBERON:0000077!4.69e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,2.00e-07,72 | |||
|phase1_expression=31.869620573854,8.37540978334467,7.27998783023258,3.93203474698879,6.01074875935617,53.5534877398928,49.5258798062514,61.7209486050735,555.270720166174,559.180153383242,429.757100246018,346.849347311723,74.6435182500057,77.1922153359747,61.2921961740819,91.1138703254217,60.8618833971488,60.2532735834234,69.791246705321,56.01943403734,21.8561255688249,122.624324733093,167.429064838058,32.4784618270616,27.5291137280604,14.9300310669905,18.9535278309993,28.8731451799091,18.0522248483555,25.7070732355129,42.7939885564738,72.393496774398,73.1927097225638,31.6963362030877,84.3446729673722,74.97182505668,84.1177747800961,7.95210098400125,7.813353445238,10.470474879476,4.1176204162171,2.73218193983378,3.88408282424923,65.4663453473002,67.7197900546357,62.22234898281,2.34717403304412,4.14247797122848,2.63623419281366,4.08302788055995,3.63964696225943,1.43752564364972,134.058302240131,92.8463541774521,104.189077734164,33.4437266846731,33.8109459127733,23.7209162447623,6.06949382578793,5.28990979272033,3.80298842103708,7.11573517345177,1.77858959222228,7.19919773825119,11.8663963508037,4.9733608046227,3.29560121570245,3.84218305321555,12.7538223139428,6.07526722492608,9.04397333810943,6.28432165688368,7.28866185140325,11.7591167246356,7.95517409451362,11.9498442259303,9.91042928994498,19.025413374693,17.664751324468,5.01167893374737,5.48925861614458,10.4182674111352,9.77140496504833,10.1297269805702,16.3494125121187,16.2045722010517,20.786265396669,13.9799584368975,99.2770394598043,52.144376473682,53.3350659211087,38.7190744641624,106.755499392117,20.5087212822371,24.6915038630114,41.6665005000522,41.290659518735,36.9833799994385,29.8753905293299,27.9138263863169,26.901093177346,26.9485602570067,12.7402619853323,7.11066703153331,46.545573817411,49.1518139021691,50.5524445014783,33.6842445171227,69.9132285847364,40.8215882428268,54.8213632580989,37.7537193107055,40.3577120198102,36.9270469353925,50.9159101897602,20.8606541607261,34.1129055473436,31.6672591654607,58.3842964286917,54.5154284322769,49.2476586166678,64.9732839201198,26.0948465705371,19.6163133997737,17.1746299587033,28.3557331281536,104.598603693668,122.980059853649,92.7612657633372,23.3673397471523,22.8750301409313,35.6858360000535,24.1615805067264,27.872984849006,24.3112012134685,28.2299797737898,43.1798902725341,38.1929399772986,33.6121268716787,20.8337437327609,52.5686589569323,40.4627703802912,40.5139792062036,39.6353670907931,34.2223590731179,35.7437279594731,22.113606996096,21.7310831420773,33.1974709116577,55.0298693288354,44.5156344134791,53.4837587123283,51.9948356051868,56.0685988100688,52.2686626476176,51.1518065723527,123.589520967129,141.284001005979,82.975741823513,44.7391668676684,42.6837429165595,41.9544603204165,40.0098603139005,28.1372851398787,36.4070386414213,30.4619467623034,32.1928081679543,33.745183944112,30.1144525341669,19.7000956894914,17.0244500046297,18.1287984407412,22.3941117596872,17.0442151825672,23.9730541363105,35.1933774337153,7.93005079161115,39.9320355661952,69.9585461755567,64.5617947772019,77.4493442545781,56.6730704191593,49.5903037774061,36.5233202136114,24.2009821387701,33.1044898995262,30.4115602648326,23.8747766449381,30.6093616777019,28.7622210769351,22.9106332867176,23.8969527905241,31.6745394591646,60.3232146579368,66.4975640471175,53.3566478954723,43.6393096127158,43.0633934126556,23.840174495845,19.7797598292667,18.0548537017581,18.5095745882701,57.2153570278197,109.78407956119,105.55218037579,100.51336423603,71.81248297153,78.6237540792879,58.818571761508,62.1423656893751,85.2831292836686,58.2070195958733,93.4493342427805,44.6569137202204,34.6361817157162,43.4435670069032,39.8262258018645,35.2183770595258,19.7685913478267,68.406399649145,66.4897103883466,55.1671528769361,41.5401739470649,22.2783322397615,18.5674039891091,15.6106918286239,26.1674339216277,21.9250042752287,17.6994793209811,16.3863314715738,18.3046080777849,13.5970115066621,58.8086007363162,23.9318500880232,57.0446556702082,77.8141624579346,20.068823748474,23.9111840648094,57.2132959364597,21.7124997395761,49.219282228936,52.7092304800462,36.406554216843,56.1576675188497,48.1245136017971,50.1045459496233,46.148419990938,49.3912399870117,41.505216684385,27.9549545286972,41.0206846251896,27.2440373610901,44.4681399035263,44.047022833667,76.9921802371784,60.4523784025904,54.7205638106199,69.9724845894382,30.7113968596004,64.2539459202808,61.2475054808684,60.7101328227434,48.8401408387068,99.551578749782,53.7634903732494,52.5991270565753,47.6615448055303,45.3753956958902,13.4533031134065,29.5785108343597,27.842416681837,31.2145430803623,27.9733335023606,35.0134691481789,67.1161085062212,37.9179406846238,28.668691747145,63.6460936354113,56.1896204901751,63.6301357992044,47.271448225242,56.9568922115363,28.8566028263552,22.2510362412612,58.7795829944613,42.5156948004238,74.4482000026241,80.4333311410031,76.9588502069372,58.3384341676633,94.5080070765836,103.564074719507,85.1311838635251,29.5947891584685,61.6855187483214,64.452271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| |||
|short_description=p1@Gnl3 | |||
}} | |||
Revision as of 01:58, 13 September 2013
| Short description: | p1@Gnl3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gnl3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:101 |
| Association with transcript: | 46bp_to_ENSMUST00000037739, NM_153547, uc007swi.2, uc007swj.2_5end |
| EntrezGene: | Gnl3 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 4.20e-11 | 32 |
| hematopoietic oligopotent progenitor cell | 4.20e-11 | 32 |
| hematopoietic stem cell | 4.20e-11 | 32 |
| hematopoietic multipotent progenitor cell | 4.20e-11 | 32 |
| lymphocyte | 8.19e-09 | 13 |
| common lymphoid progenitor | 8.19e-09 | 13 |
| lymphoid lineage restricted progenitor cell | 2.00e-08 | 12 |
| T cell | 9.00e-08 | 11 |
| pro-T cell | 9.00e-08 | 11 |
| hematopoietic lineage restricted progenitor cell | 2.21e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| endocrine system | 2.00e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
