FFCP PHASE1:Hg19::chr4:156588844..156588864,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4685|TSSclassifier=S|UniProt=Q02108|association_with_transcript=29bp_to_ENST00000513574,NM_001130684,uc003ipb.2_5end|coexpression_cluster_id=C4381|description=CAGE_peak_8_at_GUCY1A3_5end|id=chr4:156588844..156588864,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;3.07e-07;2!UBERON:0004872;6.06e-07;7!UBERON:0010122;8.14e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.33e-62!115;UBERON:0001049!6.08e-20!57;UBERON:0005068!6.08e-20!57;UBERON:0006241!6.08e-20!57;UBERON:0007135!6.08e-20!57;UBERON:0003075!2.10e-18!86;UBERON:0007284!2.10e-18!86;UBERON:0002346!7.58e-17!90;UBERON:0003080!2.89e-15!42;UBERON:0002616!3.46e-15!59;UBERON:0001017!8.16e-15!82;UBERON:0000955!1.64e-14!69;UBERON:0006238!1.64e-14!69;UBERON:0005743!1.65e-14!86;UBERON:0002780!2.35e-14!41;UBERON:0001890!2.35e-14!41;UBERON:0006240!2.35e-14!41;UBERON:0000073!7.56e-14!94;UBERON:0001016!7.56e-14!94;UBERON:0001893!1.52e-13!34;UBERON:0002020!3.74e-13!34;UBERON:0003528!3.74e-13!34;UBERON:0002791!7.68e-13!33;UBERON:0001869!2.55e-12!32;UBERON:0003056!3.00e-12!61;UBERON:0000153!2.24e-11!129;UBERON:0007811!2.24e-11!129;UBERON:0000033!4.24e-10!123;UBERON:0004121!4.72e-10!169;UBERON:0000924!2.08e-09!173;UBERON:0006601!2.08e-09!173;UBERON:0002420!7.49e-09!9;UBERON:0007245!7.49e-09!9;UBERON:0010009!7.49e-09!9;UBERON:0010011!7.49e-09!9;UBERON:0000454!7.49e-09!9;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0002619!4.51e-08!22;UBERON:0001950!5.88e-08!20;UBERON:0000956!2.02e-07!25;UBERON:0000203!2.02e-07!25;UBERON:0009663!2.98e-07!7;UBERON:0002298!9.12e-07!8|ontology_enrichment_uberon_v019=UBERON:0000369;8.49e-12;4!UBERON:0002435;8.49e-12;4!UBERON:0000204;8.49e-12;4!UBERON:0005383;1.61e-09;3!UBERON:0005382;1.61e-09;3!UBERON:0000160;1.10e-08;17!UBERON:0005409;3.67e-08;22!UBERON:0007023;3.90e-08;114!UBERON:0001873;8.14e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.35e-33,114;UBERON:0000369,8.65e-12,4;UBERON:0002435,8.65e-12,4;UBERON:0000204,8.65e-12,4;UBERON:0010082,8.65e-12,4;UBERON:0005383,1.83e-09,3;UBERON:0005382,1.83e-09,3;UBERON:0005409,7.09e-09,25;UBERON:0000160,7.78e-09,17;UBERON:0001873,7.65e-07,2;UBERON:0010122,7.65e-07,2;UBERON:0002360,8.10e-07,2;UBERON:0000094,8.10e-07,2;UBERON:0010743,8.10e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.0821005894499457,0.472264687882075,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14005097496499,1.19350006319454,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.72038491523742,0,0,0,0,0,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.714695326373367,0,0.648473311192717,1.08006287447623,1.58625035258854,0.534120355637366,0,0,0,0.144269212976445,0,0,0,0.957526850661834,0.635020748171649,0,0.842391534340376,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.73254089635947,0,0,0,1.67121139316383,2.67268212749375,0.307160702099232,0.994147647766298,0.844016498463076,0,0,0,4.18420775327246,3.31540698637377,1.0077309914171,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0.437299999980979,2.89999830173917,0.341380344856499,0,0,0,0,1.90987494426621,4.42870692906919,1.32656082487949,1.52581736317083,0.44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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4685 | |||
|TSSclassifier=S | |||
|UniProt=Q02108 | |||
|association_with_transcript=29bp_to_ENST00000513574,NM_001130684,uc003ipb.2_5end | |||
|coexpression_cluster_id=C4381 | |||
|description=CAGE_peak_8_at_GUCY1A3_5end | |||
|id=chr4:156588844..156588864,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.07e-07;2!UBERON:0004872;6.06e-07;7!UBERON:0010122;8.14e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-62!115;UBERON:0001049!6.08e-20!57;UBERON:0005068!6.08e-20!57;UBERON:0006241!6.08e-20!57;UBERON:0007135!6.08e-20!57;UBERON:0003075!2.10e-18!86;UBERON:0007284!2.10e-18!86;UBERON:0002346!7.58e-17!90;UBERON:0003080!2.89e-15!42;UBERON:0002616!3.46e-15!59;UBERON:0001017!8.16e-15!82;UBERON:0000955!1.64e-14!69;UBERON:0006238!1.64e-14!69;UBERON:0005743!1.65e-14!86;UBERON:0002780!2.35e-14!41;UBERON:0001890!2.35e-14!41;UBERON:0006240!2.35e-14!41;UBERON:0000073!7.56e-14!94;UBERON:0001016!7.56e-14!94;UBERON:0001893!1.52e-13!34;UBERON:0002020!3.74e-13!34;UBERON:0003528!3.74e-13!34;UBERON:0002791!7.68e-13!33;UBERON:0001869!2.55e-12!32;UBERON:0003056!3.00e-12!61;UBERON:0000153!2.24e-11!129;UBERON:0007811!2.24e-11!129;UBERON:0000033!4.24e-10!123;UBERON:0004121!4.72e-10!169;UBERON:0000924!2.08e-09!173;UBERON:0006601!2.08e-09!173;UBERON:0002420!7.49e-09!9;UBERON:0007245!7.49e-09!9;UBERON:0010009!7.49e-09!9;UBERON:0010011!7.49e-09!9;UBERON:0000454!7.49e-09!9;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0002619!4.51e-08!22;UBERON:0001950!5.88e-08!20;UBERON:0000956!2.02e-07!25;UBERON:0000203!2.02e-07!25;UBERON:0009663!2.98e-07!7;UBERON:0002298!9.12e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;8.49e-12;4!UBERON:0002435;8.49e-12;4!UBERON:0000204;8.49e-12;4!UBERON:0005383;1.61e-09;3!UBERON:0005382;1.61e-09;3!UBERON:0000160;1.10e-08;17!UBERON:0005409;3.67e-08;22!UBERON:0007023;3.90e-08;114!UBERON:0001873;8.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.35e-33,114;UBERON:0000369,8.65e-12,4;UBERON:0002435,8.65e-12,4;UBERON:0000204,8.65e-12,4;UBERON:0010082,8.65e-12,4;UBERON:0005383,1.83e-09,3;UBERON:0005382,1.83e-09,3;UBERON:0005409,7.09e-09,25;UBERON:0000160,7.78e-09,17;UBERON:0001873,7.65e-07,2;UBERON:0010122,7.65e-07,2;UBERON:0002360,8.10e-07,2;UBERON:0000094,8.10e-07,2;UBERON:0010743,8.10e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.0821005894499457,0.472264687882075,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14005097496499,1.19350006319454,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.72038491523742,0,0,0,0,0,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.714695326373367,0,0.648473311192717,1.08006287447623,1.58625035258854,0.534120355637366,0,0,0,0.144269212976445,0,0,0,0.957526850661834,0.635020748171649,0,0.842391534340376,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.73254089635947,0,0,0,1.67121139316383,2.67268212749375,0.307160702099232,0.994147647766298,0.844016498463076,0,0,0,4.18420775327246,3.31540698637377,1.0077309914171,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0.437299999980979,2.89999830173917,0.341380344856499,0,0,0,0,1.90987494426621,4.42870692906919,1.32656082487949,1.52581736317083,0.442317039724898,0,1.75508317723178,0,0,1.76985594558733,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,1.50377859655677,1.22206028986725,0,0,0,0.808813595768125,0,1.1713222286267,0,0,0,0,1.20990716048664,0,2.27471686662557,0,0,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.759729551470544,0,0,1.06726497369676,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,2.51354161145029,2.29160424011684,0.717873024576814,0.998395002494955,3.43380838509257,3.79391477651183,2.08268764708851,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0.953423842781029,0,0,0,0,0,1.03274246318642,0,0.788057072991982,0.786818822024972,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.879313402068495,0,0.258565912723101,0.39669780522807,0,0,1.49502377594773,1.25763444079733,2.48543433208317,1.9846640872478,0,0,0,0,0.5013797880454,0.306345576763462,0,0.157054096250234,0,0.976210119215705,0.625954653532499,0.573409195690071,0.443716206147409,0.558867626472451,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,0.215649622793364,0,0,0,0,0,0.558644917973244,0,0.23658523500376,0,0,0,1.41304295212211,0,0.319267718114302,0.41023272848151,0,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.87798860003913,0,1.03343398250592,1.07806877329642,0,0,1.98484471355718,0,0.127762427639595,0,0.336283722218824,0,0.682986574053893,0.620916591138472,0.230467975111559,0,0.679697329768317,1.05236437700559,0,0.222462803784138,1.0989032999072,2.04250266890802,0,3.65263488203798,0.215927591218621,0,3.07349139959622,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.02662806856247,1.1598144313382,0.485710993059139,0,0,0,0.11294608203896,0,0,1.15761237161917,1.5299169235277,3.29222107453066,0.245148321753905,2.82811856521951,0.588925401344836,1.18818560130834,1.2679671827502,0,0.939839179798536,1.67590508731301,0,0,0.352894871715692,0,1.46067277649303,0.917458566809082,0.430018749454354,0,1.01987235286372,0.872701380680755,2.645134202577,0,0,0,0,0,0.253397002022874,0,0,0,0,0.606229585745915,0,0,0.827463966895162,1.27940389140589,1.66645102024618,0.193766729508018,0.496597714366863,0,0.381882949668989,0.606351566874658,1.08858373948481,0.684466602170562,0.5388164241167,0.4303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| |||
|short_description=p8@GUCY1A3 | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p8@GUCY1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_GUCY1A3_5end |
Coexpression cluster: | C4381_aorta_smallcell_heart_mesodermal_Whole_lung_retina |
Association with transcript: | 29bp_to_ENST00000513574, NM_001130684, uc003ipb.2_5end |
EntrezGene: | GUCY1A3 |
HGNC: | 4685 |
UniProt: | Q02108 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.35e-33 | 114 |
corpus striatum | 8.65e-12 | 4 |
striatum | 8.65e-12 | 4 |
ventral part of telencephalon | 8.65e-12 | 4 |
future corpus striatum | 8.65e-12 | 4 |
caudate-putamen | 1.83e-09 | 3 |
dorsal striatum | 1.83e-09 | 3 |
gastrointestinal system | 7.09e-09 | 25 |
intestine | 7.78e-09 | 17 |
caudate nucleus | 7.65e-07 | 2 |
future caudate nucleus | 7.65e-07 | 2 |
meninx | 8.10e-07 | 2 |
membrane organ | 8.10e-07 | 2 |
meningeal cluster | 8.10e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.