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FFCP PHASE1:Mm9::chr14:73002752..73002810,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=319448|HGNC=|MCL_coexpression_id=953|UniProt=F6TLV3|association_with_transcript=0bp_to_ENSMUST00000162825_5end|description=CAGE_peak_2_at_Fndc3a_5end|id=chr14:73002752..73002810,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.57e-15!43;UBERON:0005409!2.37e-13!59;UBERON:0004119!9.22e-13!130;UBERON:0000925!9.22e-13!130;UBERON:0006595!9.22e-13!130;UBERON:0001007!2.20e-12!128;UBERON:0001555!2.20e-12!128;UBERON:0007026!2.20e-12!128;UBERON:0004921!2.64e-12!126;UBERON:0004185!2.64e-12!126;UBERON:0002365!2.01e-10!25;UBERON:0002330!2.01e-10!25;UBERON:0009854!3.77e-09!23;UBERON:0009856!3.77e-09!23;UBERON:0002107!1.10e-08!22;UBERON:0007499!1.10e-08!22;UBERON:0006925!1.10e-08!22;UBERON:0009497!1.10e-08!22;UBERON:0000015!1.10e-08!22;UBERON:0002423!1.10e-08!22;UBERON:0006235!1.10e-08!22;UBERON:0008835!1.10e-08!22;UBERON:0003894!1.10e-08!22;UBERON:0004161!1.10e-08!22;UBERON:0008836!1.10e-08!22;UBERON:0002108!2.47e-07!16;UBERON:0000922!9.40e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.01e-10,25;UBERON:0002330,2.01e-10,25;UBERON:0000160,3.01e-10,31;UBERON:0009854,3.77e-09,23;UBERON:0009856,3.77e-09,23;UBERON:0005409,8.16e-09,47;UBERON:0002107,1.10e-08,22;UBERON:0007499,1.10e-08,22;UBERON:0006925,1.10e-08,22;UBERON:0009497,1.10e-08,22;UBERON:0000015,1.10e-08,22;UBERON:0002423,1.10e-08,22;UBERON:0006235,1.10e-08,22;UBERON:0008835,1.10e-08,22;UBERON:0003894,1.10e-08,22;UBERON:0004161,1.10e-08,22;UBERON:0008836,1.10e-08,22;UBERON:0004119,1.14e-08,118;UBERON:0000925,1.14e-08,118;UBERON:0006595,1.14e-08,118;UBERON:0001007,2.35e-08,116;UBERON:0001555,2.35e-08,116;UBERON:0007026,2.35e-08,116;UBERON:0004921,2.75e-08,114|phase1_expression=16.1750335575842,36.2934423944936,23.2049612088663,33.5735274550581,35.0627010962443,23.3352187957527,20.5579123724063,2.1950964985068,1.12630977721333,1.17032263160997,0.513653904676515,0.478632953972018,6.33442700745461,6.55653018142481,3.99731714178795,6.88415909125408,4.19737126876888,5.36285681109004,7.67840828192137,8.48779303596061,12.0761472014519,3.07801948722744,0.261199789138935,19.3590831580022,15.1410125504332,28.711598205751,17.6612418425221,28.0112602491656,33.2540984048654,29.9915854414318,22.8382425974964,3.17515336729816,3.07532393792285,15.8481681015439,9.82095507154334,10.9714865936605,11.2293145944303,1.67412652294763,6.2506827561904,2.61761871986899,0,0.683045484958446,2.42755176515577,31.4742044938943,29.8048177785373,24.4117180375036,10.1710874765245,1.30815093828268,1.97717564461025,5.24960727500565,2.37976916763116,0,5.20126078778983,5.80289713609076,6.04968838456435,7.46052364504246,16.6189395164479,18.0485232297105,12.1389876515759,11.1088105647127,14.5781222806421,4.74382344896785,3.55717918444456,13.9484456178617,19.7773272513395,9.2362414942993,5.99200221036809,7.30014780110954,19.4936471139938,10.1254453748768,11.567872874326,3.99911378165325,5.30084498283872,18.8635830791029,11.6931474642248,11.9498442259303,11.0115880999389,10.3426743849002,11.0596703944495,12.1335384711778,11.8933936683133,15.106487746146,5.862842979029,11.8180148106653,10.6958773443767,14.7314292736834,14.6642831223076,13.9799584368975,4.84647637332378,11.8647349367653,41.7404863730416,47.3233132339763,38.7583660213418,77.7172595958457,76.6736172588249,44.8026887097336,24.2968846827931,10.7371103224176,10.3914401841148,8.48014978824817,18.7321748302985,30.7983545794363,35.6727335589304,14.2213340630666,7.79367747640371,6.33399663687746,7.07734223020697,21.3523855074642,35.4744900596625,16.92240385339,12.8379141806941,10.3518262626128,12.4532368518272,11.3041980414467,13.1699351991989,11.8126595849895,21.7531571606249,23.1358971071859,12.3845477272982,9.70601099684455,7.72945314611377,8.24287930329878,37.2783522436244,21.958559775866,23.458031163107,36.7858159500372,9.58520996047362,14.3976655438418,11.0551097553566,14.0803201040533,9.60751265919116,16.2094114225595,15.4703644971126,18.6672283851141,11.4283424507758,13.6282660976916,10.0820970211813,16.7949410323626,32.3485130795104,45.0345571597054,28.106015679944,14.2539304748753,20.1669585381991,14.7690721479001,11.1579858608178,14.8611915530426,13.0245397138023,20.9549730298603,20.2633913356872,31.5807153880258,26.7445708729202,21.0427903130472,26.970583174883,18.4573648256748,23.4591635505056,19.9034266818493,12.6398373716382,14.1541348913093,13.3556844715929,15.3273071676271,15.9477720787145,13.1445304866541,14.4414288706978,11.4123254413494,7.55908853148153,11.1616293480196,5.36546802799238,6.07179780309281,3.78487654801005,7.38753588355929,7.29619285912702,7.45619935869195,10.7579556492615,9.79706856950714,15.9820360908737,22.6390147234426,62.7795687669216,38.874233299541,30.7135080770737,22.759193842323,24.871420035164,35.0929332844616,50.9245720404753,47.5564065281398,43.1821446005506,34.5867804920423,40.4649686168434,36.0111214394483,38.7978533367049,43.1433316154026,35.01436407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|EntrezGene=319448
|HGNC=
|MCL_coexpression_id=953
|UniProt=F6TLV3
|association_with_transcript=0bp_to_ENSMUST00000162825_5end
|description=CAGE_peak_2_at_Fndc3a_5end
|id=chr14:73002752..73002810,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.57e-15!43;UBERON:0005409!2.37e-13!59;UBERON:0004119!9.22e-13!130;UBERON:0000925!9.22e-13!130;UBERON:0006595!9.22e-13!130;UBERON:0001007!2.20e-12!128;UBERON:0001555!2.20e-12!128;UBERON:0007026!2.20e-12!128;UBERON:0004921!2.64e-12!126;UBERON:0004185!2.64e-12!126;UBERON:0002365!2.01e-10!25;UBERON:0002330!2.01e-10!25;UBERON:0009854!3.77e-09!23;UBERON:0009856!3.77e-09!23;UBERON:0002107!1.10e-08!22;UBERON:0007499!1.10e-08!22;UBERON:0006925!1.10e-08!22;UBERON:0009497!1.10e-08!22;UBERON:0000015!1.10e-08!22;UBERON:0002423!1.10e-08!22;UBERON:0006235!1.10e-08!22;UBERON:0008835!1.10e-08!22;UBERON:0003894!1.10e-08!22;UBERON:0004161!1.10e-08!22;UBERON:0008836!1.10e-08!22;UBERON:0002108!2.47e-07!16;UBERON:0000922!9.40e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.01e-10,25;UBERON:0002330,2.01e-10,25;UBERON:0000160,3.01e-10,31;UBERON:0009854,3.77e-09,23;UBERON:0009856,3.77e-09,23;UBERON:0005409,8.16e-09,47;UBERON:0002107,1.10e-08,22;UBERON:0007499,1.10e-08,22;UBERON:0006925,1.10e-08,22;UBERON:0009497,1.10e-08,22;UBERON:0000015,1.10e-08,22;UBERON:0002423,1.10e-08,22;UBERON:0006235,1.10e-08,22;UBERON:0008835,1.10e-08,22;UBERON:0003894,1.10e-08,22;UBERON:0004161,1.10e-08,22;UBERON:0008836,1.10e-08,22;UBERON:0004119,1.14e-08,118;UBERON:0000925,1.14e-08,118;UBERON:0006595,1.14e-08,118;UBERON:0001007,2.35e-08,116;UBERON:0001555,2.35e-08,116;UBERON:0007026,2.35e-08,116;UBERON:0004921,2.75e-08,114
|phase1_expression=16.1750335575842,36.2934423944936,23.2049612088663,33.5735274550581,35.0627010962443,23.3352187957527,20.5579123724063,2.1950964985068,1.12630977721333,1.17032263160997,0.513653904676515,0.478632953972018,6.33442700745461,6.55653018142481,3.99731714178795,6.88415909125408,4.19737126876888,5.36285681109004,7.67840828192137,8.48779303596061,12.0761472014519,3.07801948722744,0.261199789138935,19.3590831580022,15.1410125504332,28.711598205751,17.6612418425221,28.0112602491656,33.2540984048654,29.9915854414318,22.8382425974964,3.17515336729816,3.07532393792285,15.8481681015439,9.82095507154334,10.9714865936605,11.2293145944303,1.67412652294763,6.2506827561904,2.61761871986899,0,0.683045484958446,2.42755176515577,31.4742044938943,29.8048177785373,24.4117180375036,10.1710874765245,1.30815093828268,1.97717564461025,5.24960727500565,2.37976916763116,0,5.20126078778983,5.80289713609076,6.04968838456435,7.46052364504246,16.6189395164479,18.0485232297105,12.1389876515759,11.1088105647127,14.5781222806421,4.74382344896785,3.55717918444456,13.9484456178617,19.7773272513395,9.2362414942993,5.99200221036809,7.30014780110954,19.4936471139938,10.1254453748768,11.567872874326,3.99911378165325,5.30084498283872,18.8635830791029,11.6931474642248,11.9498442259303,11.0115880999389,10.3426743849002,11.0596703944495,12.1335384711778,11.8933936683133,15.106487746146,5.862842979029,11.8180148106653,10.6958773443767,14.7314292736834,14.6642831223076,13.9799584368975,4.84647637332378,11.8647349367653,41.7404863730416,47.3233132339763,38.7583660213418,77.7172595958457,76.6736172588249,44.8026887097336,24.2968846827931,10.7371103224176,10.3914401841148,8.48014978824817,18.7321748302985,30.7983545794363,35.6727335589304,14.2213340630666,7.79367747640371,6.33399663687746,7.07734223020697,21.3523855074642,35.4744900596625,16.92240385339,12.8379141806941,10.3518262626128,12.4532368518272,11.3041980414467,13.1699351991989,11.8126595849895,21.7531571606249,23.1358971071859,12.3845477272982,9.70601099684455,7.72945314611377,8.24287930329878,37.2783522436244,21.958559775866,23.458031163107,36.7858159500372,9.58520996047362,14.3976655438418,11.0551097553566,14.0803201040533,9.60751265919116,16.2094114225595,15.4703644971126,18.6672283851141,11.4283424507758,13.6282660976916,10.0820970211813,16.7949410323626,32.3485130795104,45.0345571597054,28.106015679944,14.2539304748753,20.1669585381991,14.7690721479001,11.1579858608178,14.8611915530426,13.0245397138023,20.9549730298603,20.2633913356872,31.5807153880258,26.7445708729202,21.0427903130472,26.970583174883,18.4573648256748,23.4591635505056,19.9034266818493,12.6398373716382,14.1541348913093,13.3556844715929,15.3273071676271,15.9477720787145,13.1445304866541,14.4414288706978,11.4123254413494,7.55908853148153,11.1616293480196,5.36546802799238,6.07179780309281,3.78487654801005,7.38753588355929,7.29619285912702,7.45619935869195,10.7579556492615,9.79706856950714,15.9820360908737,22.6390147234426,62.7795687669216,38.874233299541,30.7135080770737,22.759193842323,24.871420035164,35.0929332844616,50.9245720404753,47.5564065281398,43.1821446005506,34.5867804920423,40.4649686168434,36.0111214394483,38.7978533367049,43.1433316154026,35.0143640797005,32.4600275404619,10.0523987505133,16.9087798662399,21.4144697778853,19.9578301288408,19.9771061782655,13.3258057791605,11.3193401452421,14.9086249459398,13.815888050041,11.8461277364928,49.5075887235539,15.8502850430289,14.545365638377,17.3143826536337,20.2860121388503,25.3236017740038,21.6431974014207,31.93427125704,15.2407113168533,35.1438608880744,35.9420516318386,37.9583766621873,58.975120218652,56.8302475381001,76.4232981603346,46.7970215722466,19.0295785871603,20.2755810594419,17.2742875028547,18.8417045210459,16.6630076284836,13.7355131102289,14.5206620940468,6.82967767502296,15.6058792665129,14.1737401375216,15.9454768657487,20.646777654183,18.6499780415167,20.1062191428301,45.2373851817817,62.0052479553329,40.324670387561,51.600171558985,11.3990918891332,10.4318401067061,7.70494243270374,10.6037789425837,7.88770548540642,15.2271110275689,11.8482868753039,12.9043150894378,16.7099005561796,10.190755108398,11.7395103485719,12.2747460322751,11.0680577825027,12.8528526568723,20.5813123551989,13.1768546713769,10.750539317336,25.570369060743,83.6294371541766,24.2780636154981,14.511530734308,42.2475378653212,37.7986422887389,45.1929667477573,22.224833212467,26.5379622518579,27.4502981356235,50.5658812697306,67.4679094879992,64.9753922463577,51.406380468822,28.8097750450096,12.2890749593617,21.6480405381908,32.0985822892515,20.5124140242381,18.7585883486418,9.74287837166718,19.7124234773517,22.4541995115649,96.1503815519634,16.6535115470895,18.729873496725,13.148217634338,12.2953514323231,11.3257220824092,45.4710105142567,9.82754100655701,10.9357363710626,13.2087595496462,14.2599786074678,8.09984365120171,9.84198439591381,10.5237959675,9.5187920796559,10.7762618289217,10.7795979567451,15.2747298882418,27.0467274511871,21.551863515446,21.4930628235385,17.9815934572443,30.789121488211,24.2755823492677,23.8868487046221,17.275892170946,34.0887379757415,77.0460748227788,1.69107881605257,20.932316446157,12.4093867842823,13.2226808073952,11.1077448190849,13.8544022902438,10.2100797621806,9.89553324814021,7.86445083192831,3.14059357073808,3.16833006883652,14.5365115488962,10.1362607645082,12.0171819882848,13.1220031207573,10.3835483487139,9.73538638428198,10.8175904567972,8.27061352177632,11.3082423941925,9.75447125183998,13.1074040677893,14.6186821109629,13.5658696712865,14.9602434792408,12.4701710988366,3.7737612073591,3.76798197759798,0.839423081820392,26.0805951943457,31.1552909248962,42.6743284542728,18.0069438426415,69.2169503568801,14.1187960654267,24.3972375348804,15.4681788628637,12.7171354934329,11.6464028361009,13.5970901530146,12.8254275044043,12.6089936902782,14.0474146785103,12.4262474820437,34.0422500076099,13.5668456956351,17.75629499843,24.0675649897611,20.3324767749143,14.7074806760011,16.8907513129228,19.3672953804561,25.0316983481616,21.7319602116866,21.7992197905606,19.6171395041519,24.8149994795188,19.3996211786754,21.7680427341774,21.9095097990214,16.5714586101143,16.7831021803423,18.1317796353455,19.5774563778748,25.0294554241353,18.4574838405711,19.5517675756803,23.5461194944372,20.1394074088807,18.7844429519522,20.122077016005,21.0455769150274,20.642225304571,16.2731258780744,15.0666473017701,16.4502485567191,20.0523211153148,17.6627998952001,15.4325288784913,10.4920442733937,18.4805970671873,14.8261027293326,12.6250299165437,9.48543102213917,8.57910991795559
|short_description=p2@Fndc3a
}}

Revision as of 03:03, 13 September 2013

Short description:p2@Fndc3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fndc3a_5end
Coexpression cluster:MCL_coexpression_mm9:953
Association with transcript: 0bp_to_ENSMUST00000162825_5end
EntrezGene:Fndc3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fndc3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I333.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.14
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I228.01
Ileum epithelium, pool1.CNhs13199.10252-104B933.25
Ileum epithelium, pool2.CNhs13232.10253-104C129.99
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D929.80
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D94.85
Mouse Schwann, donor2.CNhs12573.11746-123F911.86
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C877.72
Mouse hepatocyte, donor6.CNhs13090.11822-124F476.67
Mouse hepatocyte, donor8.CNhs13091.11824-124F644.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.35
accessory axillary lymph node, adult.CNhs10475.1063-29H935.47
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C512.84
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A821.75
aorta, adult.CNhs10498.46-23H123.14
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I223.46
colon, adult.CNhs10468.36-18H736.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.06
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F116.21
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B213.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.79
epididymis, adult.CNhs10490.58-23B232.35
eyeball, adult.CNhs10484.31-12G445.03
eyeball, embryo E12.CNhs11016.345-16C628.11
eyeball, embryo E14.CNhs10521.399-16E214.25
eyeball, embryo E15.CNhs10593.426-16C920.17
eyeball, embryo E17.CNhs11023.1261-18D414.77
eyeball, neonate N00.CNhs11207.633-15C611.16
eyeball, neonate N01.CNhs11140.1532-43E714.86
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A220.95
forelimb, embryo E11.CNhs10596.335-25E220.26
forelimb, embryo E12.CNhs10600.359-14H231.58
forelimb, embryo E13.CNhs10589.384-1E226.74
forelimb, embryo E14.CNhs10577.413-26A821.04
forelimb, embryo E15.CNhs11007.437-20E726.97
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B523.46
gonad, embryo E13.CNhs11044.1564-45I619.90
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.36
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F515.95
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G17.30
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G122.64
intestinal mucosa, adult.CNhs10506.860-29I362.78
intestine, adult.CNhs10496.178-9A338.87
intestine, embryo E12.CNhs11019.1251-16I530.71
intestine, embryo E13.CNhs11010.381-16D522.76
intestine, embryo E15.CNhs10602.976-16D824.87
intestine, embryo E16.CNhs10585.463-22H435.09
intestine, embryo E17.CNhs10582.482-18D350.92
intestine, embryo E18.CNhs10526.1289-20F747.56
intestine, neonate N00.CNhs11126.644-26D143.18
intestine, neonate N01.CNhs11192.1322-23E934.59
intestine, neonate N06.CNhs11102.688-20B840.46
intestine, neonate N07.CNhs11095.720-20F236.01
intestine, neonate N10.CNhs11098.755-23A538.80
intestine, neonate N20.CNhs11187.827-18D143.14
intestine, neonate N25.CNhs11121.1352-25E335.01
intestine, neonate N30.CNhs11131.1384-42G132.46
kidney, embryo E14.CNhs10606.411-4I910.05
kidney, embryo E15.CNhs10997.434-16F816.91
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C719.98
kidney, neonate N00.CNhs11214.646-21G713.33
kidney, neonate N10.CNhs11206.758-6D511.32
kidney, neonate N20.CNhs11113.832-19I114.91
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H111.85
liver, adult pregnant day01.CNhs10466.508-5B249.51
liver, embryo E12.CNhs10601.355-15F815.85
liver, embryo E13.CNhs10524.378-3H614.55
liver, embryo E14.CNhs10594.409-16E117.31
liver, embryo E15.CNhs10520.433-16D720.29
liver, embryo E16.CNhs10523.462-17F525.32
liver, embryo E17.CNhs10510.481-18A321.64
liver, embryo E18.CNhs10579.499-43G431.93
liver, neonate N00.CNhs11117.641-24F415.24
liver, neonate N03.CNhs11123.1345-25G235.14
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H237.96
liver, neonate N10.CNhs11115.751-24B958.98
liver, neonate N20.CNhs11220.823-25A356.83
liver, neonate N25.CNhs11198.1368-26H176.42
liver, neonate N30.CNhs11106.1382-42D146.80
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G220.28
lung, embryo E14.CNhs10604.404-26F817.27
lung, embryo E15.CNhs11020.432-17C518.84
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A613.74
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E515.61
lung, neonate N07.CNhs11111.715-19A314.17
lung, neonate N10.CNhs11219.750-23E615.95
lung, neonate N20.CNhs11109.822-18A420.65
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H220.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A145.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A162.01
mammary gland, adult lactating day02.CNhs10480.595-22B640.32
mammary gland, adult pregnant day19.CNhs10476.588-5H251.60
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.71
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I720.58
ovary, embryo E18.CNhs11040.505-44H713.18
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E483.63
pancreas, embryo E14.CNhs11012.405-44F424.28
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E542.25
pancreas, embryo E17.CNhs10599.1558-45G337.80
pancreas, embryo E18.CNhs10580.1535-43I745.19
pancreas, neonate N00.CNhs11105.645-26G922.22
pancreas, neonate N01.CNhs11138.1531-43D726.54
pancreas, neonate N02.CNhs11139.1539-43D827.45
pancreas, neonate N16.CNhs11136.787-43B650.57
pancreas, neonate N25.CNhs11094.1555-45E267.47
pancreas, neonate N30.CNhs11182.1548-44H564.98
pituitary gland, adult.CNhs10493.21-1G851.41
pituitary gland, embryo E12.CNhs11018.346-16E628.81
pituitary gland, embryo E13.CNhs11009.370-44C712.29
pituitary gland, embryo E14.CNhs11037.398-44A521.65
pituitary gland, embryo E15.CNhs10592.427-16B932.10
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F518.76
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F896.15
skin, adult.CNhs10492.30-1C316.65
skin, neonate N00.CNhs11124.650-25G418.73
skin, neonate N03.CNhs11215.662-22H313.15
skin, neonate N06.CNhs11097.693-20I512.30
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I145.47
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H19.84
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.78
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E327.05
stomach, embryo E15.CNhs10603.1252-16G821.55
stomach, embryo E16.CNhs11022.459-17D421.49
stomach, embryo E17.CNhs11006.1035-18D517.98
stomach, embryo E18.CNhs10999.1286-20C630.79
stomach, neonate N03.CNhs11193.1340-24B824.28
stomach, neonate N07.CNhs11210.718-18A923.89
stomach, neonate N25.CNhs11104.1355-25E417.28
stomach, neonate N30.CNhs11134.1386-42I134.09
submandibular gland, adult.CNhs10469.59-29C177.05
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F520.93
testis, embryo E15.CNhs11034.443-27C512.41
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G513.85
testis, neonate N00.CNhs11189.1300-22B710.21
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D97.86
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I212.02
thymus, embryo E16.CNhs11002.456-26C513.12
thymus, embryo E17.CNhs10581.478-18C110.38
thymus, embryo E18.CNhs10595.1273-19G49.74
thymus, neonate N02.CNhs11181.1541-43F810.82
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C411.31
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E413.11
thymus, neonate N20.CNhs11186.820-7A214.62
thymus, neonate N25.CNhs11125.1362-25G713.57
thymus, neonate N30.CNhs11132.1393-42G214.96
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E426.08
uterus, adult pregnant day19.CNhs10497.590-15F531.16
uterus, adult.CNhs10509.92-27E542.67
vagina, adult.CNhs10502.89-27D518.01
vesicular gland, adult.CNhs10491.51-27F869.22
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I834.04
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H217.76
whole body, embryo E14.5.CNhs10578.420-27D224.07
whole body, embryo E14.CNhs10519.395-14B120.33
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.73
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.55
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.66
whole body, embryo E17.5.CNhs10513.490-9F915.43
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.01e-1025
exocrine system2.01e-1025
intestine3.01e-1031
digestive tract diverticulum3.77e-0923
sac3.77e-0923
gastrointestinal system8.16e-0947
liver1.10e-0822
epithelial sac1.10e-0822
digestive gland1.10e-0822
epithelium of foregut-midgut junction1.10e-0822
anatomical boundary1.10e-0822
hepatobiliary system1.10e-0822
foregut-midgut junction1.10e-0822
hepatic diverticulum1.10e-0822
liver primordium1.10e-0822
septum transversum1.10e-0822
liver bud1.10e-0822
endoderm-derived structure1.14e-08118
endoderm1.14e-08118
presumptive endoderm1.14e-08118
digestive system2.35e-08116
digestive tract2.35e-08116
primitive gut2.35e-08116
subdivision of digestive tract2.75e-08114







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