FFCP PHASE1:Mm9::chr14:99710165..99710168,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1671|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:99710165..99710168,+|id=chr14:99710165..99710168,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.19e-09,3;CL:0002202,2.19e-09,3;CL:0000069,2.19e-09,3;CL:0002632,2.19e-09,3;CL:0002368,2.19e-09,3;CL:0000307,2.19e-09,3;CL:0000377,2.19e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.08e-09!59;UBERON:0004119!7.48e-07!130;UBERON:0000925!7.48e-07!130;UBERON:0006595!7.48e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.70e-21,47;UBERON:0004119,1.85e-11,118;UBERON:0000925,1.85e-11,118;UBERON:0006595,1.85e-11,118;UBERON:0000160,2.32e-11,31;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0000945,1.82e-10,16;UBERON:0010039,1.82e-10,16;UBERON:0004921,8.17e-10,114;UBERON:0003126,2.19e-09,3;UBERON:0001005,2.19e-09,3;UBERON:0007196,2.19e-09,3;UBERON:0001558,2.19e-09,3;UBERON:0001155,5.41e-07,2;UBERON:0000059,5.41e-07,2|phase1_expression=0,0.348975407639361,0,0,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,0.91763712426868,0,0.430761996159075,0.215471232685889,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.94841936910093,1.26679932737549,2.02209778005913,0.68510327831436,0,0.148442139064825,0,0,0.461230994512117,0,0.352766121407114,0,1.97755974187499,0,0,0.161766849947409,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0.502617408451458,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0.403367049246685,0.889512175379481,0.380451252225118,1.89811624617805,0.988193728344065,2.26201687920243,0.994782360205754,1.36474860983384,2.69645822596266,4.75503709724327,2.98711909881551,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.704070744865506,0.502518772325447,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,1.17335854031855,0,0,0.16488625294148,0.484393280087717,0.663442174209714,0.716234064018819,0.492422699235184,1.1659233465194,0,0,0,0,0,0.27338845544205,0,0,0,0,1.90934123603023,0,0.813277868507395,1.51207477150522,1.88179466413022,2.40198820120795,1.34864346384821,1.57041565878138,1.04702376793612,3.49960427887841,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0.241584120826006,0.576060012515731,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.167884616364078,0.772758376128762,0.375364950902364,0.183151624267265,1.07184189539533,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.532427418478012,1.43061713968393,0.726732083161643,0.282328141245992,0.676916863133412,0.73171189149109,0.526139422875686,0.271608227691724,0,0.474540072496697,0.0985044823755635,1.22769312950907,0.309873682371932,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr14:99710165..99710168,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1671 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:99710165..99710168,+ | |||
|id=chr14:99710165..99710168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.19e-09,3;CL:0002202,2.19e-09,3;CL:0000069,2.19e-09,3;CL:0002632,2.19e-09,3;CL:0002368,2.19e-09,3;CL:0000307,2.19e-09,3;CL:0000377,2.19e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.08e-09!59;UBERON:0004119!7.48e-07!130;UBERON:0000925!7.48e-07!130;UBERON:0006595!7.48e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.70e-21,47;UBERON:0004119,1.85e-11,118;UBERON:0000925,1.85e-11,118;UBERON:0006595,1.85e-11,118;UBERON:0000160,2.32e-11,31;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0000945,1.82e-10,16;UBERON:0010039,1.82e-10,16;UBERON:0004921,8.17e-10,114;UBERON:0003126,2.19e-09,3;UBERON:0001005,2.19e-09,3;UBERON:0007196,2.19e-09,3;UBERON:0001558,2.19e-09,3;UBERON:0001155,5.41e-07,2;UBERON:0000059,5.41e-07,2 | |||
|phase1_expression=0,0.348975407639361,0,0,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,0.91763712426868,0,0.430761996159075,0.215471232685889,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.94841936910093,1.26679932737549,2.02209778005913,0.68510327831436,0,0.148442139064825,0,0,0.461230994512117,0,0.352766121407114,0,1.97755974187499,0,0,0.161766849947409,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0.502617408451458,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0.403367049246685,0.889512175379481,0.380451252225118,1.89811624617805,0.988193728344065,2.26201687920243,0.994782360205754,1.36474860983384,2.69645822596266,4.75503709724327,2.98711909881551,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.704070744865506,0.502518772325447,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,1.17335854031855,0,0,0.16488625294148,0.484393280087717,0.663442174209714,0.716234064018819,0.492422699235184,1.1659233465194,0,0,0,0,0,0.27338845544205,0,0,0,0,1.90934123603023,0,0.813277868507395,1.51207477150522,1.88179466413022,2.40198820120795,1.34864346384821,1.57041565878138,1.04702376793612,3.49960427887841,0.621339313086926,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0.241584120826006,0.576060012515731,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.167884616364078,0.772758376128762,0.375364950902364,0.183151624267265,1.07184189539533,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.532427418478012,1.43061713968393,0.726732083161643,0.282328141245992,0.676916863133412,0.73171189149109,0.526139422875686,0.271608227691724,0,0.474540072496697,0.0985044823755635,1.22769312950907,0.309873682371932,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr14:99710165..99710168,+ | |||
}} |
Revision as of 03:17, 13 September 2013
Short description: | p@chr14:99710165..99710168, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99710165..99710168, + |
Coexpression cluster: | MCL_coexpression_mm9:1671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.19e-09 | 3 |
epithelial cell of tracheobronchial tree | 2.19e-09 | 3 |
branched duct epithelial cell | 2.19e-09 | 3 |
epithelial cell of lower respiratory tract | 2.19e-09 | 3 |
respiratory epithelial cell | 2.19e-09 | 3 |
tracheal epithelial cell | 2.19e-09 | 3 |
tracheoblast | 2.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.70e-21 | 47 |
endoderm-derived structure | 1.85e-11 | 118 |
endoderm | 1.85e-11 | 118 |
presumptive endoderm | 1.85e-11 | 118 |
intestine | 2.32e-11 | 31 |
digestive system | 1.22e-10 | 116 |
digestive tract | 1.22e-10 | 116 |
primitive gut | 1.22e-10 | 116 |
stomach | 1.82e-10 | 16 |
food storage organ | 1.82e-10 | 16 |
subdivision of digestive tract | 8.17e-10 | 114 |
trachea | 2.19e-09 | 3 |
respiratory airway | 2.19e-09 | 3 |
tracheobronchial tree | 2.19e-09 | 3 |
lower respiratory tract | 2.19e-09 | 3 |
colon | 5.41e-07 | 2 |
large intestine | 5.41e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.