FFCP PHASE1:Hg19::chr4:184330046..184330052,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:184330046..184330052,-|id=chr4:184330046..184330052,-|ontology_enrichment_celltype=CL:0002150!3.89e-16!3;CL:0000861!3.89e-16!3;CL:1000507!2.86e-15!12;CL:1000494!2.86e-15!12;CL:1000449!2.63e-11!16;CL:1000497!5.54e-10!18;CL:0002518!5.54e-10!18;CL:0000066!3.86e-09!254;CL:0002178!6.43e-08!3;CL:0000313!5.58e-07!1|ontology_enrichment_celltype_v019=CL:0000313;1.46e-50;1!CL:0000159;4.32e-26;2!CL:0002178;9.45e-18;3|ontology_enrichment_celltype_v019_2=CL:0000313,1.46e-50,1;CL:0000159,4.32e-26,2;CL:0002178,9.46e-18,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.53e-15!106;DOID:4468!2.28e-11!2;DOID:0050687!4.06e-10!143;DOID:299!2.09e-09!25;DOID:2152!5.58e-07!1|ontology_enrichment_disease_v019=DOID:2152;1.46e-50;1!DOID:299;5.27e-09;25|ontology_enrichment_disease_v019_2=DOID:2152,1.46e-50,1;DOID:299,5.27e-09,25|ontology_enrichment_uberon=UBERON:0001737!8.79e-36!9;UBERON:0001557!1.93e-20!19;UBERON:0009773!2.86e-15!12;UBERON:0001231!2.86e-15!12;UBERON:0004810!2.86e-15!12;UBERON:0004211!2.63e-11!16;UBERON:0001285!2.63e-11!16;UBERON:0007684!2.63e-11!16;UBERON:0003220!2.63e-11!16;UBERON:0004208!2.63e-11!16;UBERON:0006555!1.32e-10!17;UBERON:0005103!1.32e-10!17;UBERON:0000083!1.32e-10!17;UBERON:0009201!1.32e-10!17;UBERON:0004819!1.32e-10!17;UBERON:0006553!1.32e-10!17;UBERON:0003074!1.32e-10!17;UBERON:0003060!1.32e-10!17;UBERON:0000080!5.54e-10!18;UBERON:0002120!5.54e-10!18;UBERON:0004875!5.54e-10!18;UBERON:0005721!5.54e-10!18;UBERON:0005754!5.54e-10!18;UBERON:0007297!5.54e-10!18;UBERON:0008947!1.43e-09!38;UBERON:0003258!1.43e-09!38;UBERON:0000072!2.16e-09!46;UBERON:0004876!6.34e-09!20;UBERON:0004921!7.70e-09!129;UBERON:0004185!7.70e-09!129;UBERON:0003887!1.80e-08!21;UBERON:0005409!6.14e-08!35;UBERON:0000065!6.43e-08!53;UBERON:0001007!9.54e-08!155;UBERON:0001555!9.54e-08!155;UBERON:0007026!9.54e-08!155;UBERON:0004911!5.58e-07!1;UBERON:0004119!8.68e-07!169;UBERON:0000925!8.68e-07!169;UBERON:0006595!8.68e-07!169|ontology_enrichment_uberon_v019=UBERON:0004911;1.46e-50;1!UBERON:0004909;4.32e-26;2!UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0005409;1.17e-09;22!UBERON:0001871;2.18e-08;6!UBERON:0001155;8.37e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.46e-50,1;UBERON:0004909,4.32e-26,2;UBERON:0005409,1.11e-08,25;UBERON:0001871,2.35e-08,6;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8;UBERON:0001155,7.91e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.980446171670911,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0.977756913674015,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,2.57267493134922,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr4:184330046..184330052,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:184330046..184330052,- | |||
|id=chr4:184330046..184330052,- | |||
|ontology_enrichment_celltype=CL:0002150!3.89e-16!3;CL:0000861!3.89e-16!3;CL:1000507!2.86e-15!12;CL:1000494!2.86e-15!12;CL:1000449!2.63e-11!16;CL:1000497!5.54e-10!18;CL:0002518!5.54e-10!18;CL:0000066!3.86e-09!254;CL:0002178!6.43e-08!3;CL:0000313!5.58e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.46e-50;1!CL:0000159;4.32e-26;2!CL:0002178;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.46e-50,1;CL:0000159,4.32e-26,2;CL:0002178,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.53e-15!106;DOID:4468!2.28e-11!2;DOID:0050687!4.06e-10!143;DOID:299!2.09e-09!25;DOID:2152!5.58e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.46e-50;1!DOID:299;5.27e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.46e-50,1;DOID:299,5.27e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.79e-36!9;UBERON:0001557!1.93e-20!19;UBERON:0009773!2.86e-15!12;UBERON:0001231!2.86e-15!12;UBERON:0004810!2.86e-15!12;UBERON:0004211!2.63e-11!16;UBERON:0001285!2.63e-11!16;UBERON:0007684!2.63e-11!16;UBERON:0003220!2.63e-11!16;UBERON:0004208!2.63e-11!16;UBERON:0006555!1.32e-10!17;UBERON:0005103!1.32e-10!17;UBERON:0000083!1.32e-10!17;UBERON:0009201!1.32e-10!17;UBERON:0004819!1.32e-10!17;UBERON:0006553!1.32e-10!17;UBERON:0003074!1.32e-10!17;UBERON:0003060!1.32e-10!17;UBERON:0000080!5.54e-10!18;UBERON:0002120!5.54e-10!18;UBERON:0004875!5.54e-10!18;UBERON:0005721!5.54e-10!18;UBERON:0005754!5.54e-10!18;UBERON:0007297!5.54e-10!18;UBERON:0008947!1.43e-09!38;UBERON:0003258!1.43e-09!38;UBERON:0000072!2.16e-09!46;UBERON:0004876!6.34e-09!20;UBERON:0004921!7.70e-09!129;UBERON:0004185!7.70e-09!129;UBERON:0003887!1.80e-08!21;UBERON:0005409!6.14e-08!35;UBERON:0000065!6.43e-08!53;UBERON:0001007!9.54e-08!155;UBERON:0001555!9.54e-08!155;UBERON:0007026!9.54e-08!155;UBERON:0004911!5.58e-07!1;UBERON:0004119!8.68e-07!169;UBERON:0000925!8.68e-07!169;UBERON:0006595!8.68e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.46e-50;1!UBERON:0004909;4.32e-26;2!UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0005409;1.17e-09;22!UBERON:0001871;2.18e-08;6!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.46e-50,1;UBERON:0004909,4.32e-26,2;UBERON:0005409,1.11e-08,25;UBERON:0001871,2.35e-08,6;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8;UBERON:0001155,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.980446171670911,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0.977756913674015,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,2.57267493134922,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr4:184330046..184330052,- | |||
}} |
Revision as of 10:11, 13 September 2013
Short description: | p@chr4:184330046..184330052, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:184330046..184330052, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.46e-50 | 1 |
seromucus secreting cell | 4.32e-26 | 2 |
epithelial cell of stomach | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.46e-50 | 1 |
epithelium of gonad | 4.32e-26 | 2 |
gastrointestinal system | 1.11e-08 | 25 |
temporal lobe | 2.35e-08 | 6 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
colon | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.46e-50 | 1 |
adenocarcinoma | 5.27e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.