FFCP PHASE1:Mm9::chr15:10930503..10930518,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22293|HGNC=|MCL_coexpression_id=730|UniProt=P58355,D3YWT7,Q541S3|association_with_transcript=27bp_to_ENSMUST00000022851,ENSMUST00000117100,NM_053077,uc007vgx.1_5end|description=CAGE_peak_2_at_Slc45a2_5end|id=chr15:10930503..10930518,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.05e-31!9;UBERON:0000019!1.05e-31!9;UBERON:0000047!1.05e-31!9;UBERON:0004088!1.05e-31!9;UBERON:0002104!1.05e-31!9;UBERON:0001456!1.05e-31!9;UBERON:0003072!1.05e-31!9;UBERON:0003071!1.05e-31!9;UBERON:0004128!1.05e-31!9;UBERON:0001444!1.13e-25!11;UBERON:0000020!2.07e-23!12;UBERON:0001032!2.07e-23!12;UBERON:0004456!2.07e-23!12;UBERON:0005085!1.70e-21!13;UBERON:0000014!1.57e-18!5;UBERON:0001003!1.57e-18!5;UBERON:0002097!1.57e-18!5;UBERON:0002199!1.57e-18!5;UBERON:0007029!1.57e-18!5;UBERON:0007376!1.57e-18!5;UBERON:0002416!1.57e-18!5;UBERON:0007383!1.57e-18!5;UBERON:0003102!7.49e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.40e-64,9;UBERON:0000019,5.40e-64,9;UBERON:0000047,5.40e-64,9;UBERON:0010312,5.40e-64,9;UBERON:0004088,5.40e-64,9;UBERON:0002104,5.40e-64,9;UBERON:0001456,5.40e-64,9;UBERON:0003072,5.40e-64,9;UBERON:0004128,5.40e-64,9;UBERON:0003071,5.40e-64,9;UBERON:0001444,2.75e-52,11;UBERON:0000020,6.78e-48,12;UBERON:0001032,6.78e-48,12;UBERON:0004456,6.78e-48,12;UBERON:0000033,3.54e-44,13;UBERON:0005085,3.54e-44,13;UBERON:0007811,1.41e-15,36;UBERON:0000014,1.85e-14,5;UBERON:0001003,1.85e-14,5;UBERON:0002097,1.85e-14,5;UBERON:0002199,1.85e-14,5;UBERON:0007029,1.85e-14,5;UBERON:0007376,1.85e-14,5;UBERON:0002416,1.85e-14,5;UBERON:0007383,1.85e-14,5;UBERON:0010371,1.35e-13,73;UBERON:0000153,6.31e-13,43;UBERON:0003056,2.98e-11,49;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002346,1.99e-08,64;UBERON:0003075,1.99e-08,64;UBERON:0007284,1.99e-08,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,2.21204753036596,1.14951052216736,1.0803727788321,1.20563854268572,1.76894897793452,2.8185018462667,2.34254311399322,2.58703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.484393280087717,3.07595917133595,4.53614907211919,3.77524069413641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.271608227691724,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0|short_description=p2@Slc45a2}} | ||
|EntrezGene=22293 | |||
|HGNC= | |||
|MCL_coexpression_id=730 | |||
|UniProt=P58355,D3YWT7,Q541S3 | |||
|association_with_transcript=27bp_to_ENSMUST00000022851,ENSMUST00000117100,NM_053077,uc007vgx.1_5end | |||
|description=CAGE_peak_2_at_Slc45a2_5end | |||
|id=chr15:10930503..10930518,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.05e-31!9;UBERON:0000019!1.05e-31!9;UBERON:0000047!1.05e-31!9;UBERON:0004088!1.05e-31!9;UBERON:0002104!1.05e-31!9;UBERON:0001456!1.05e-31!9;UBERON:0003072!1.05e-31!9;UBERON:0003071!1.05e-31!9;UBERON:0004128!1.05e-31!9;UBERON:0001444!1.13e-25!11;UBERON:0000020!2.07e-23!12;UBERON:0001032!2.07e-23!12;UBERON:0004456!2.07e-23!12;UBERON:0005085!1.70e-21!13;UBERON:0000014!1.57e-18!5;UBERON:0001003!1.57e-18!5;UBERON:0002097!1.57e-18!5;UBERON:0002199!1.57e-18!5;UBERON:0007029!1.57e-18!5;UBERON:0007376!1.57e-18!5;UBERON:0002416!1.57e-18!5;UBERON:0007383!1.57e-18!5;UBERON:0003102!7.49e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.40e-64,9;UBERON:0000019,5.40e-64,9;UBERON:0000047,5.40e-64,9;UBERON:0010312,5.40e-64,9;UBERON:0004088,5.40e-64,9;UBERON:0002104,5.40e-64,9;UBERON:0001456,5.40e-64,9;UBERON:0003072,5.40e-64,9;UBERON:0004128,5.40e-64,9;UBERON:0003071,5.40e-64,9;UBERON:0001444,2.75e-52,11;UBERON:0000020,6.78e-48,12;UBERON:0001032,6.78e-48,12;UBERON:0004456,6.78e-48,12;UBERON:0000033,3.54e-44,13;UBERON:0005085,3.54e-44,13;UBERON:0007811,1.41e-15,36;UBERON:0000014,1.85e-14,5;UBERON:0001003,1.85e-14,5;UBERON:0002097,1.85e-14,5;UBERON:0002199,1.85e-14,5;UBERON:0007029,1.85e-14,5;UBERON:0007376,1.85e-14,5;UBERON:0002416,1.85e-14,5;UBERON:0007383,1.85e-14,5;UBERON:0010371,1.35e-13,73;UBERON:0000153,6.31e-13,43;UBERON:0003056,2.98e-11,49;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002346,1.99e-08,64;UBERON:0003075,1.99e-08,64;UBERON:0007284,1.99e-08,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,2.21204753036596,1.14951052216736,1.0803727788321,1.20563854268572,1.76894897793452,2.8185018462667,2.34254311399322,2.58703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.484393280087717,3.07595917133595,4.53614907211919,3.77524069413641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.271608227691724,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Slc45a2 | |||
}} |
Revision as of 10:12, 13 September 2013
Short description: | p2@Slc45a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc45a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:730 |
Association with transcript: | 27bp_to_ENSMUST00000022851, ENSMUST00000117100, NM_053077, uc007vgx.1_5end |
EntrezGene: | Slc45a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.40e-64 | 9 |
camera-type eye | 5.40e-64 | 9 |
simple eye | 5.40e-64 | 9 |
immature eye | 5.40e-64 | 9 |
ocular region | 5.40e-64 | 9 |
visual system | 5.40e-64 | 9 |
face | 5.40e-64 | 9 |
optic cup | 5.40e-64 | 9 |
optic vesicle | 5.40e-64 | 9 |
eye primordium | 5.40e-64 | 9 |
subdivision of head | 2.75e-52 | 11 |
sense organ | 6.78e-48 | 12 |
sensory system | 6.78e-48 | 12 |
entire sense organ system | 6.78e-48 | 12 |
head | 3.54e-44 | 13 |
ectodermal placode | 3.54e-44 | 13 |
craniocervical region | 1.41e-15 | 36 |
zone of skin | 1.85e-14 | 5 |
skin epidermis | 1.85e-14 | 5 |
skin of body | 1.85e-14 | 5 |
integument | 1.85e-14 | 5 |
surface | 1.85e-14 | 5 |
outer epithelium | 1.85e-14 | 5 |
integumental system | 1.85e-14 | 5 |
enveloping layer of ectoderm | 1.85e-14 | 5 |
ecto-epithelium | 1.35e-13 | 73 |
anterior region of body | 6.31e-13 | 43 |
pre-chordal neural plate | 2.98e-11 | 49 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
neurectoderm | 1.99e-08 | 64 |
neural plate | 1.99e-08 | 64 |
presumptive neural plate | 1.99e-08 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.