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FFCP PHASE1:Hg19::chr4:74977698..74977700,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:74977698..74977700,+|id=chr4:74977698..74977700,+|ontology_enrichment_celltype=CL:0002368!9.25e-27!13;CL:0002202!7.68e-20!9;CL:0002632!7.68e-20!9;CL:0002076!1.20e-15!43;CL:0000223!1.01e-13!59;CL:0000068!1.54e-12!3;CL:0000069!1.54e-12!3;CL:0000307!1.54e-12!3;CL:0000377!1.54e-12!3;CL:0002328!5.81e-12!3;CL:0000066!3.02e-11!254;CL:0002159!1.08e-09!13;CL:0000317!1.34e-08!2;CL:1000448!1.34e-08!2;CL:0002308!1.34e-08!2;CL:0002140!1.34e-08!2;CL:0000220!9.14e-08!246;CL:0002321!1.21e-07!248;CL:0000622!3.11e-07!5|ontology_enrichment_celltype_v019=CL:0000307;3.00e-66;3!CL:0002368;1.95e-42;13!CL:0002202;1.47e-39;9!CL:0002632;1.47e-39;9!CL:0002076;2.91e-13;42!CL:0000317;2.59e-12;2!CL:1000448;2.59e-12;2!CL:0002308;2.59e-12;2!CL:0002140;2.59e-12;2!CL:0000362;9.69e-11;9!CL:0002328;8.31e-09;3!CL:0002159;3.14e-07;14|ontology_enrichment_celltype_v019_2=CL:0000068,9.82e-67,3;CL:0000069,9.82e-67,3;CL:0000307,9.82e-67,3;CL:0000377,9.82e-67,3;CL:0002368,1.64e-42,13;CL:0002202,8.96e-40,9;CL:0002632,8.96e-40,9;CL:0002076,6.02e-19,42;CL:0000223,9.70e-14,58;CL:0000317,2.32e-12,2;CL:1000448,2.32e-12,2;CL:0002308,2.32e-12,2;CL:0002140,2.32e-12,2;CL:0000362,9.69e-11,9;CL:0002328,8.31e-09,3;CL:0002159,3.14e-07,14;CL:0000066,8.89e-07,253|ontology_enrichment_development_v019=CL:0000377;3.00e-66;3!CL:0000223;8.92e-08;58|ontology_enrichment_disease=DOID:4074!4.27e-08!2;DOID:4905!4.27e-08!2;DOID:3498!4.27e-08!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007196!2.34e-12!14;UBERON:0001558!2.34e-12!14;UBERON:0004815!5.81e-12!3;UBERON:0002031!5.81e-12!3;UBERON:0000065!4.33e-10!53;UBERON:0002185!4.54e-09!4;UBERON:0001004!6.47e-09!72;UBERON:0005178!9.71e-09!34;UBERON:0002224!9.71e-09!34;UBERON:0002419!1.34e-08!2;UBERON:0007771!1.34e-08!2;UBERON:0003297!1.34e-08!2;UBERON:0001821!1.34e-08!2;UBERON:0003487!1.34e-08!2;UBERON:0001820!1.34e-08!2;UBERON:0005089!1.34e-08!2;UBERON:0005088!1.34e-08!2;UBERON:0005181!1.97e-08!35;UBERON:0008947!1.30e-07!38;UBERON:0003258!1.30e-07!38;UBERON:0002048!6.41e-07!22;UBERON:0000117!6.41e-07!22;UBERON:0000171!6.41e-07!22;UBERON:0000170!6.41e-07!22;UBERON:0005597!6.41e-07!22;UBERON:0000118!6.41e-07!22;UBERON:0004119!8.91e-07!169;UBERON:0000925!8.91e-07!169;UBERON:0006595!8.91e-07!169|ontology_enrichment_uberon_v019=UBERON:0003126;6.20e-29;7!UBERON:0001005;6.20e-29;7!UBERON:0007196;5.58e-24;15!UBERON:0001558;5.58e-24;15!UBERON:0002419;2.59e-12;2!UBERON:0007771;2.59e-12;2!UBERON:0003297;2.59e-12;2!UBERON:0001821;2.59e-12;2!UBERON:0003487;2.59e-12;2!UBERON:0001820;2.59e-12;2!UBERON:0005178;6.80e-11;34!UBERON:0002224;6.80e-11;34!UBERON:0000072;2.09e-10;37!UBERON:0000065;9.58e-10;44!UBERON:0005181;2.83e-09;35!UBERON:0004815;8.31e-09;3!UBERON:0002031;8.31e-09;3!UBERON:0001003;8.33e-07;15!UBERON:0007376;8.33e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.85e-29,7;UBERON:0001005,3.85e-29,7;UBERON:0007196,4.15e-24,15;UBERON:0001558,4.15e-24,15;UBERON:0002419,2.32e-12,2;UBERON:0007771,2.32e-12,2;UBERON:0003297,2.32e-12,2;UBERON:0001821,2.32e-12,2;UBERON:0003487,2.32e-12,2;UBERON:0001820,2.32e-12,2;UBERON:0005089,2.32e-12,2;UBERON:0005088,2.32e-12,2;UBERON:0005178,6.82e-11,34;UBERON:0002224,6.82e-11,34;UBERON:0005181,1.36e-10,35;UBERON:0000065,1.92e-10,54;UBERON:0008947,8.73e-10,38;UBERON:0003258,8.73e-10,38;UBERON:0004815,8.31e-09,3;UBERON:0002031,8.31e-09,3;UBERON:0000072,5.62e-08,47;UBERON:0001004,1.19e-07,74;UBERON:0000915,3.07e-07,52;UBERON:0001003,8.33e-07,15;UBERON:0007376,8.33e-07,15;UBERON:0007383,8.33e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0.330569830721956,0.192190067365106,1.02090169995667,0,0,0.94443704049192,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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|DPIdataset=robustDPI
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=N
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr4:74977698..74977700,+
|id=chr4:74977698..74977700,+
|ontology_enrichment_celltype=CL:0002368!9.25e-27!13;CL:0002202!7.68e-20!9;CL:0002632!7.68e-20!9;CL:0002076!1.20e-15!43;CL:0000223!1.01e-13!59;CL:0000068!1.54e-12!3;CL:0000069!1.54e-12!3;CL:0000307!1.54e-12!3;CL:0000377!1.54e-12!3;CL:0002328!5.81e-12!3;CL:0000066!3.02e-11!254;CL:0002159!1.08e-09!13;CL:0000317!1.34e-08!2;CL:1000448!1.34e-08!2;CL:0002308!1.34e-08!2;CL:0002140!1.34e-08!2;CL:0000220!9.14e-08!246;CL:0002321!1.21e-07!248;CL:0000622!3.11e-07!5
|ontology_enrichment_celltype_v019=CL:0000307;3.00e-66;3!CL:0002368;1.95e-42;13!CL:0002202;1.47e-39;9!CL:0002632;1.47e-39;9!CL:0002076;2.91e-13;42!CL:0000317;2.59e-12;2!CL:1000448;2.59e-12;2!CL:0002308;2.59e-12;2!CL:0002140;2.59e-12;2!CL:0000362;9.69e-11;9!CL:0002328;8.31e-09;3!CL:0002159;3.14e-07;14
|ontology_enrichment_celltype_v019_2=CL:0000068,9.82e-67,3;CL:0000069,9.82e-67,3;CL:0000307,9.82e-67,3;CL:0000377,9.82e-67,3;CL:0002368,1.64e-42,13;CL:0002202,8.96e-40,9;CL:0002632,8.96e-40,9;CL:0002076,6.02e-19,42;CL:0000223,9.70e-14,58;CL:0000317,2.32e-12,2;CL:1000448,2.32e-12,2;CL:0002308,2.32e-12,2;CL:0002140,2.32e-12,2;CL:0000362,9.69e-11,9;CL:0002328,8.31e-09,3;CL:0002159,3.14e-07,14;CL:0000066,8.89e-07,253
|ontology_enrichment_development_v019=CL:0000377;3.00e-66;3!CL:0000223;8.92e-08;58
|ontology_enrichment_disease=DOID:4074!4.27e-08!2;DOID:4905!4.27e-08!2;DOID:3498!4.27e-08!2
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007196!2.34e-12!14;UBERON:0001558!2.34e-12!14;UBERON:0004815!5.81e-12!3;UBERON:0002031!5.81e-12!3;UBERON:0000065!4.33e-10!53;UBERON:0002185!4.54e-09!4;UBERON:0001004!6.47e-09!72;UBERON:0005178!9.71e-09!34;UBERON:0002224!9.71e-09!34;UBERON:0002419!1.34e-08!2;UBERON:0007771!1.34e-08!2;UBERON:0003297!1.34e-08!2;UBERON:0001821!1.34e-08!2;UBERON:0003487!1.34e-08!2;UBERON:0001820!1.34e-08!2;UBERON:0005089!1.34e-08!2;UBERON:0005088!1.34e-08!2;UBERON:0005181!1.97e-08!35;UBERON:0008947!1.30e-07!38;UBERON:0003258!1.30e-07!38;UBERON:0002048!6.41e-07!22;UBERON:0000117!6.41e-07!22;UBERON:0000171!6.41e-07!22;UBERON:0000170!6.41e-07!22;UBERON:0005597!6.41e-07!22;UBERON:0000118!6.41e-07!22;UBERON:0004119!8.91e-07!169;UBERON:0000925!8.91e-07!169;UBERON:0006595!8.91e-07!169
|ontology_enrichment_uberon_v019=UBERON:0003126;6.20e-29;7!UBERON:0001005;6.20e-29;7!UBERON:0007196;5.58e-24;15!UBERON:0001558;5.58e-24;15!UBERON:0002419;2.59e-12;2!UBERON:0007771;2.59e-12;2!UBERON:0003297;2.59e-12;2!UBERON:0001821;2.59e-12;2!UBERON:0003487;2.59e-12;2!UBERON:0001820;2.59e-12;2!UBERON:0005178;6.80e-11;34!UBERON:0002224;6.80e-11;34!UBERON:0000072;2.09e-10;37!UBERON:0000065;9.58e-10;44!UBERON:0005181;2.83e-09;35!UBERON:0004815;8.31e-09;3!UBERON:0002031;8.31e-09;3!UBERON:0001003;8.33e-07;15!UBERON:0007376;8.33e-07;15
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.85e-29,7;UBERON:0001005,3.85e-29,7;UBERON:0007196,4.15e-24,15;UBERON:0001558,4.15e-24,15;UBERON:0002419,2.32e-12,2;UBERON:0007771,2.32e-12,2;UBERON:0003297,2.32e-12,2;UBERON:0001821,2.32e-12,2;UBERON:0003487,2.32e-12,2;UBERON:0001820,2.32e-12,2;UBERON:0005089,2.32e-12,2;UBERON:0005088,2.32e-12,2;UBERON:0005178,6.82e-11,34;UBERON:0002224,6.82e-11,34;UBERON:0005181,1.36e-10,35;UBERON:0000065,1.92e-10,54;UBERON:0008947,8.73e-10,38;UBERON:0003258,8.73e-10,38;UBERON:0004815,8.31e-09,3;UBERON:0002031,8.31e-09,3;UBERON:0000072,5.62e-08,47;UBERON:0001004,1.19e-07,74;UBERON:0000915,3.07e-07,52;UBERON:0001003,8.33e-07,15;UBERON:0007376,8.33e-07,15;UBERON:0007383,8.33e-07,15
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0.330569830721956,0.192190067365106,1.02090169995667,0,0,0.94443704049192,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0.783939179315021,0.522355239482415,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0.533636729388577,0,0,0,0,0,0,0,0
|short_description=p@chr4:74977698..74977700,+
}}

Revision as of 11:42, 13 September 2013

Short description:p@chr4:74977698..74977700, +
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:74977698..74977700, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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