FFCP PHASE1:Mm9::chr16:21527531..21527544,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209018|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_ENSMUST00000134650_5end|description=CAGE_peak_3_at_Vps8_5end|id=chr16:21527531..21527544,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.30e-17!18;UBERON:0000948!1.30e-17!18;UBERON:0005498!1.30e-17!18;UBERON:0004140!1.30e-17!18;UBERON:0009881!1.30e-17!18;UBERON:0004141!1.30e-17!18;UBERON:0003084!1.30e-17!18;UBERON:0007005!1.30e-17!18;UBERON:0004139!1.30e-17!18;UBERON:0004291!1.30e-17!18;UBERON:0004535!9.74e-13!23;UBERON:0001009!9.74e-13!23;UBERON:0004872!1.59e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.73e-37,18;UBERON:0000948,6.73e-37,18;UBERON:0005498,6.73e-37,18;UBERON:0004140,6.73e-37,18;UBERON:0009881,6.73e-37,18;UBERON:0004141,6.73e-37,18;UBERON:0003084,6.73e-37,18;UBERON:0007005,6.73e-37,18;UBERON:0004139,6.73e-37,18;UBERON:0004291,6.73e-37,18;UBERON:0004535,1.69e-28,23;UBERON:0001009,1.69e-28,23;UBERON:0004872,2.58e-19,33;UBERON:0003914,2.18e-15,47;UBERON:0003103,2.16e-14,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,1.2604344302271,1.18372367792605,0.983821158737019,2.62254091908543,3.48800917125612,3.75582761959467,5.13767506415546,3.45575684818309,2.79084688934462,1.29710095273369,2.33919979880532,2.63460138349261,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.888986911206461,0.412070114477788,0.962757628775446,1.26348605881899,0.760437899670719,0.565879024158229,0.842773567228942,0.960377286073039,1.14870937911227,0,1.0429589335037,0.192909220463705,1.23625770240992,1.03039244094078,0.685738504770831,0.70990322463735,0.953744759789284,0.872078499793971,0.470546902076653,0.930760686808441,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.249810577937946,0.935726433781634,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p3@Vps8}} | ||
|EntrezGene=209018 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000134650_5end | |||
|description=CAGE_peak_3_at_Vps8_5end | |||
|id=chr16:21527531..21527544,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.30e-17!18;UBERON:0000948!1.30e-17!18;UBERON:0005498!1.30e-17!18;UBERON:0004140!1.30e-17!18;UBERON:0009881!1.30e-17!18;UBERON:0004141!1.30e-17!18;UBERON:0003084!1.30e-17!18;UBERON:0007005!1.30e-17!18;UBERON:0004139!1.30e-17!18;UBERON:0004291!1.30e-17!18;UBERON:0004535!9.74e-13!23;UBERON:0001009!9.74e-13!23;UBERON:0004872!1.59e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.73e-37,18;UBERON:0000948,6.73e-37,18;UBERON:0005498,6.73e-37,18;UBERON:0004140,6.73e-37,18;UBERON:0009881,6.73e-37,18;UBERON:0004141,6.73e-37,18;UBERON:0003084,6.73e-37,18;UBERON:0007005,6.73e-37,18;UBERON:0004139,6.73e-37,18;UBERON:0004291,6.73e-37,18;UBERON:0004535,1.69e-28,23;UBERON:0001009,1.69e-28,23;UBERON:0004872,2.58e-19,33;UBERON:0003914,2.18e-15,47;UBERON:0003103,2.16e-14,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0.938104239924385,1.2604344302271,1.18372367792605,0.983821158737019,2.62254091908543,3.48800917125612,3.75582761959467,5.13767506415546,3.45575684818309,2.79084688934462,1.29710095273369,2.33919979880532,2.63460138349261,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.888986911206461,0.412070114477788,0.962757628775446,1.26348605881899,0.760437899670719,0.565879024158229,0.842773567228942,0.960377286073039,1.14870937911227,0,1.0429589335037,0.192909220463705,1.23625770240992,1.03039244094078,0.685738504770831,0.70990322463735,0.953744759789284,0.872078499793971,0.470546902076653,0.930760686808441,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.249810577937946,0.935726433781634,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Vps8 | |||
}} |
Revision as of 12:11, 13 September 2013
Short description: | p3@Vps8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vps8_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000134650_5end |
EntrezGene: | Vps8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.73e-37 | 18 |
heart | 6.73e-37 | 18 |
primitive heart tube | 6.73e-37 | 18 |
primary heart field | 6.73e-37 | 18 |
anterior lateral plate mesoderm | 6.73e-37 | 18 |
heart tube | 6.73e-37 | 18 |
heart primordium | 6.73e-37 | 18 |
cardiac mesoderm | 6.73e-37 | 18 |
cardiogenic plate | 6.73e-37 | 18 |
heart rudiment | 6.73e-37 | 18 |
cardiovascular system | 1.69e-28 | 23 |
circulatory system | 1.69e-28 | 23 |
splanchnic layer of lateral plate mesoderm | 2.58e-19 | 33 |
epithelial tube | 2.18e-15 | 47 |
compound organ | 2.16e-14 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.