FFCP PHASE1:Mm9::chr16:58555862..58555865,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=245|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:58555862..58555865,-|id=chr16:58555862..58555865,-|ontology_enrichment_celltype=CL:0000219!2.51e-08!54;CL:0000548!7.24e-08!115;CL:0000004!7.24e-08!115;CL:0000255!7.24e-08!115|ontology_enrichment_celltype_v019_2=CL:0000219,1.12e-11,54;CL:0002320,1.90e-09,46;CL:0000134,1.90e-09,46;CL:0000988,3.13e-08,32;CL:0002032,3.13e-08,32;CL:0000037,3.13e-08,32;CL:0000837,3.13e-08,32;CL:0000542,1.41e-07,13;CL:0000051,1.41e-07,13;CL:0000838,4.18e-07,12;CL:0000034,6.79e-07,97;CL:0000723,9.18e-07,91;CL:0000048,9.18e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.90e-09,46|phase1_expression=0.320297694209588,0,0.454999239389536,1.20985684522732,1.50268718983904,0,1.86890112476421,1.42035655785734,1.97104211012333,1.17032263160997,1.88339765048055,0.558405112967355,2.39681021903688,0.874204024189974,1.66554880907831,1.01237633694913,2.09868563438444,0.946386496074713,2.87940310572051,1.69755860719212,0.0850432901510698,0.893618560807968,4.4403964153619,0.95995453676044,1.83527424853736,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0,0.61506478758457,0,0,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,4.69434806608824,1.30815093828268,0.439372365468944,1.1665793944457,2.51975558925653,1.43752564364972,1.34226084846189,3.62681071005672,3.02484419228218,1.80081605225163,2.0057340795713,3.09403255366465,0.202316460859598,1.05798195854407,0.633831403506179,2.03306719241479,4.4464739805557,1.3498495759221,0,1.4209602298922,0.599200221036809,0.768436610643109,0.622137673850866,0.810035629990144,0.420649922702764,1.14260393761521,0.662605622854841,0.489963196859816,0.670918297127655,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0.302904773332736,0.982430281388212,0.289864488701678,0,0,0.539703191637817,0,0.896053774194671,0,0.852151612890289,2.85764605063156,2.12003744706204,0.281686839553361,1.28326477414318,0,0,1.5154372870785,2.28023878927589,0.505524445014783,0.22836775943812,0.258937883647172,0.445326417194474,1.21439728736295,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,0,23.8844849026466,0.323533699894818,0.220841518460394,0,14.9113408974498,0.292780797011547,0,0,0.359445373517761,1.19980546198682,0.762421362438388,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.916554274652847,0.248813941220186,0.505445516867349,0.420883711772948,0.650602214813519,0.229902104433473,0.900310649026746,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,1.07783996466421,0.567318240503458,0.527853372491847,1.09597866213787,0.556094498451196,0.696504333044333,0.205782136407943,0.995171334092466,1.40442637462647,1.02939162845886,1.70498099637356,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,1.16266972375204,0.268273401399619,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0,0.878200461164203,0.268412837520744,0,0.102904612379284,0,0,1.06644125267617,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0.216138049874694,0,1.13800740571849,0.799739588268102,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0.493588655687202,0.296452627087149,0.500535317148282,0,0.899448449539415,0.608580364165509,0.241177159752417,1.78238096246994,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,1.14075483509418,1.18821560042632,1.17345124144251,0.837531287209079,1.42826184531608,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.117211686592203,1.63934945376675,0,0.94652465824877,1.56175497718655,1.72338718186239,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.16902343164525,1.97643888973262,0,0.283880170416537,0.712262414669021,0.162886959353576,0,1.32745138339963,0.485561272309963,1.81394134178851,1.13163047853539,0.590603785761546,1.53717573971964,0,0,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.776152102696527,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0.441056796109924,0.16488625294148,0.484393280087717,0.301564624640779,0.477489376012546,0.328281799490123,0,0.18542530201051,0.854354403989263,0.412773735926445,0.555583582109135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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=245 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:58555862..58555865,- | |||
|id=chr16:58555862..58555865,- | |||
|ontology_enrichment_celltype=CL:0000219!2.51e-08!54;CL:0000548!7.24e-08!115;CL:0000004!7.24e-08!115;CL:0000255!7.24e-08!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.12e-11,54;CL:0002320,1.90e-09,46;CL:0000134,1.90e-09,46;CL:0000988,3.13e-08,32;CL:0002032,3.13e-08,32;CL:0000037,3.13e-08,32;CL:0000837,3.13e-08,32;CL:0000542,1.41e-07,13;CL:0000051,1.41e-07,13;CL:0000838,4.18e-07,12;CL:0000034,6.79e-07,97;CL:0000723,9.18e-07,91;CL:0000048,9.18e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.90e-09,46 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,1.20985684522732,1.50268718983904,0,1.86890112476421,1.42035655785734,1.97104211012333,1.17032263160997,1.88339765048055,0.558405112967355,2.39681021903688,0.874204024189974,1.66554880907831,1.01237633694913,2.09868563438444,0.946386496074713,2.87940310572051,1.69755860719212,0.0850432901510698,0.893618560807968,4.4403964153619,0.95995453676044,1.83527424853736,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0,0.61506478758457,0,0,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,4.69434806608824,1.30815093828268,0.439372365468944,1.1665793944457,2.51975558925653,1.43752564364972,1.34226084846189,3.62681071005672,3.02484419228218,1.80081605225163,2.0057340795713,3.09403255366465,0.202316460859598,1.05798195854407,0.633831403506179,2.03306719241479,4.4464739805557,1.3498495759221,0,1.4209602298922,0.599200221036809,0.768436610643109,0.622137673850866,0.810035629990144,0.420649922702764,1.14260393761521,0.662605622854841,0.489963196859816,0.670918297127655,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0.302904773332736,0.982430281388212,0.289864488701678,0,0,0.539703191637817,0,0.896053774194671,0,0.852151612890289,2.85764605063156,2.12003744706204,0.281686839553361,1.28326477414318,0,0,1.5154372870785,2.28023878927589,0.505524445014783,0.22836775943812,0.258937883647172,0.445326417194474,1.21439728736295,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,0,23.8844849026466,0.323533699894818,0.220841518460394,0,14.9113408974498,0.292780797011547,0,0,0.359445373517761,1.19980546198682,0.762421362438388,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.916554274652847,0.248813941220186,0.505445516867349,0.420883711772948,0.650602214813519,0.229902104433473,0.900310649026746,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,1.07783996466421,0.567318240503458,0.527853372491847,1.09597866213787,0.556094498451196,0.696504333044333,0.205782136407943,0.995171334092466,1.40442637462647,1.02939162845886,1.70498099637356,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,1.16266972375204,0.268273401399619,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0,0.878200461164203,0.268412837520744,0,0.102904612379284,0,0,1.06644125267617,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0.216138049874694,0,1.13800740571849,0.799739588268102,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0.493588655687202,0.296452627087149,0.500535317148282,0,0.899448449539415,0.608580364165509,0.241177159752417,1.78238096246994,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,1.14075483509418,1.18821560042632,1.17345124144251,0.837531287209079,1.42826184531608,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.117211686592203,1.63934945376675,0,0.94652465824877,1.56175497718655,1.72338718186239,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.16902343164525,1.97643888973262,0,0.283880170416537,0.712262414669021,0.162886959353576,0,1.32745138339963,0.485561272309963,1.81394134178851,1.13163047853539,0.590603785761546,1.53717573971964,0,0,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.776152102696527,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0.441056796109924,0.16488625294148,0.484393280087717,0.301564624640779,0.477489376012546,0.328281799490123,0,0.18542530201051,0.854354403989263,0.412773735926445,0.555583582109135,0.188368457004691,0.27338845544205,1.14389086603261,0.169978429993855,0.69975726161829,0.414599921413271,0,0.474503990371703,1.42323626988794,0.324016022465404,1.04544148007234,0.655087691238533,0.539457385539283,0.165306911450672,0.26175594198403,0.90730481304255,0.621339313086926,1.69107881605257,0.448549638131936,0.66183396182839,0.388902376688095,0.645799117388655,0.337912250981556,0.234714477291508,0.13020438484395,0.104859344425711,0.724752362478018,0.288030006257865,0.632022241256357,1.01362607645082,0.410843828659309,0.77952493786677,0.716106782669926,0.993406773906324,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.504130925684203,0,0.288635524920988,0.116876902181569,0.226730383615211,1.33191572024439,0.448569283047378,1.34307693091263,1.15913756419314,1.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| |||
|short_description=p@chr16:58555862..58555865,- | |||
}} | |||
Revision as of 12:58, 13 September 2013
| Short description: | p@chr16:58555862..58555865, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr16:58555862..58555865, - |
| Coexpression cluster: | MCL_coexpression_mm9:245 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 1.12e-11 | 54 |
| connective tissue cell | 1.90e-09 | 46 |
| mesenchymal cell | 1.90e-09 | 46 |
| hematopoietic cell | 3.13e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 3.13e-08 | 32 |
| hematopoietic stem cell | 3.13e-08 | 32 |
| hematopoietic multipotent progenitor cell | 3.13e-08 | 32 |
| lymphocyte | 1.41e-07 | 13 |
| common lymphoid progenitor | 1.41e-07 | 13 |
| lymphoid lineage restricted progenitor cell | 4.18e-07 | 12 |
| stem cell | 6.79e-07 | 97 |
| somatic stem cell | 9.18e-07 | 91 |
| multi fate stem cell | 9.18e-07 | 91 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.90e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
