Personal tools

FFCP PHASE1:Hg19::chr5:172721766..172721775,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-34bp_to_ENST00000501670_5end|coexpression_cluster_id=C159|description=CAGE_peak_3_at_ENST00000501670_5end|id=chr5:172721766..172721775,-|ontology_enrichment_celltype=CL:0000039!9.55e-31!7;CL:0000586!9.55e-31!7;CL:1001319!6.57e-07!1;CL:1000600!6.57e-07!1|ontology_enrichment_celltype_v019=CL:0002615;1.03e-17;3!CL:0000083;1.00e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7|ontology_enrichment_celltype_v019_2=CL:0002615,1.12e-17,3;CL:0000083,1.00e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!2.78e-16!22;DOID:2994!2.78e-16!22;DOID:0050687!1.64e-15!143;DOID:305!1.58e-12!106;DOID:162!1.61e-08!235;DOID:14566!3.02e-08!239;DOID:1799!1.06e-07!1;DOID:10165!1.06e-07!1;DOID:1798!1.06e-07!1;DOID:3111!1.12e-07!1;DOID:3603!1.12e-07!1;DOID:3112!4.34e-07!1|ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:3111;5.12e-50;1!DOID:3603;5.12e-50;1!DOID:1793;1.00e-13;4!DOID:170;1.32e-09;6|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:3111,3.99e-50,1;DOID:3603,3.99e-50,1;DOID:1793,1.00e-13,4;DOID:170,1.32e-09,6|ontology_enrichment_uberon=UBERON:0002323!5.48e-09!46;UBERON:0004458!2.39e-08!49;UBERON:0009497!3.73e-08!25;UBERON:0000015!3.73e-08!25;UBERON:0002423!3.73e-08!25;UBERON:0006235!3.73e-08!25;UBERON:0004161!3.73e-08!25;UBERON:0000466!1.44e-07!126;UBERON:0003929!1.76e-07!54;UBERON:0000473!3.17e-07!8;UBERON:0004645!6.57e-07!1;UBERON:0001256!6.57e-07!1;UBERON:0001259!6.57e-07!1;UBERON:0000991!6.61e-07!21;UBERON:0009196!6.61e-07!21;UBERON:0009117!6.61e-07!21;UBERON:0005564!6.61e-07!21;UBERON:0008835!9.28e-07!22;UBERON:0003894!9.28e-07!22|ontology_enrichment_uberon_v019=UBERON:0003688;1.50e-09;6!UBERON:0002358;1.50e-09;6!UBERON:0003684;1.50e-09;6!UBERON:0001178;1.50e-09;6!UBERON:0002323;6.63e-09;45!UBERON:0004457;8.61e-07;9!UBERON:0000042;8.61e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002323,1.44e-10,46;UBERON:0004458,5.64e-10,49;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0003886,3.93e-09,54;UBERON:0002553,3.51e-08,61|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53353370531344,0.807818799687949,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.412079291905832,0.606631894687664,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66669372273991,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0.801652215796681,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p3@ENST00000501670}}
|DPIdataset=robustDPI
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding
|HGNC=
|TSSclassifier=S
|UniProt=
|association_with_transcript=-34bp_to_ENST00000501670_5end
|coexpression_cluster_id=C159
|description=CAGE_peak_3_at_ENST00000501670_5end
|id=chr5:172721766..172721775,-
|ontology_enrichment_celltype=CL:0000039!9.55e-31!7;CL:0000586!9.55e-31!7;CL:1001319!6.57e-07!1;CL:1000600!6.57e-07!1
|ontology_enrichment_celltype_v019=CL:0002615;1.03e-17;3!CL:0000083;1.00e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7
|ontology_enrichment_celltype_v019_2=CL:0002615,1.12e-17,3;CL:0000083,1.00e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:3095!2.78e-16!22;DOID:2994!2.78e-16!22;DOID:0050687!1.64e-15!143;DOID:305!1.58e-12!106;DOID:162!1.61e-08!235;DOID:14566!3.02e-08!239;DOID:1799!1.06e-07!1;DOID:10165!1.06e-07!1;DOID:1798!1.06e-07!1;DOID:3111!1.12e-07!1;DOID:3603!1.12e-07!1;DOID:3112!4.34e-07!1
|ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:3111;5.12e-50;1!DOID:3603;5.12e-50;1!DOID:1793;1.00e-13;4!DOID:170;1.32e-09;6
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:3111,3.99e-50,1;DOID:3603,3.99e-50,1;DOID:1793,1.00e-13,4;DOID:170,1.32e-09,6
|ontology_enrichment_uberon=UBERON:0002323!5.48e-09!46;UBERON:0004458!2.39e-08!49;UBERON:0009497!3.73e-08!25;UBERON:0000015!3.73e-08!25;UBERON:0002423!3.73e-08!25;UBERON:0006235!3.73e-08!25;UBERON:0004161!3.73e-08!25;UBERON:0000466!1.44e-07!126;UBERON:0003929!1.76e-07!54;UBERON:0000473!3.17e-07!8;UBERON:0004645!6.57e-07!1;UBERON:0001256!6.57e-07!1;UBERON:0001259!6.57e-07!1;UBERON:0000991!6.61e-07!21;UBERON:0009196!6.61e-07!21;UBERON:0009117!6.61e-07!21;UBERON:0005564!6.61e-07!21;UBERON:0008835!9.28e-07!22;UBERON:0003894!9.28e-07!22
|ontology_enrichment_uberon_v019=UBERON:0003688;1.50e-09;6!UBERON:0002358;1.50e-09;6!UBERON:0003684;1.50e-09;6!UBERON:0001178;1.50e-09;6!UBERON:0002323;6.63e-09;45!UBERON:0004457;8.61e-07;9!UBERON:0000042;8.61e-07;9
|ontology_enrichment_uberon_v019_2=UBERON:0002323,1.44e-10,46;UBERON:0004458,5.64e-10,49;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0003886,3.93e-09,54;UBERON:0002553,3.51e-08,61
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53353370531344,0.807818799687949,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.412079291905832,0.606631894687664,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66669372273991,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0.801652215796681,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0
|short_description=p3@ENST00000501670
}}

Revision as of 14:55, 13 September 2013

Short description:p3@ENST00000501670
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_ENST00000501670_5end
Coexpression cluster:C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal
Association with transcript: -34bp_to_ENST00000501670_5end
EntrezGene:NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.