FFCP PHASE1:Mm9::chr18:12758403..12758434,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72747|HGNC=|MCL_coexpression_id=0|UniProt=E9PV21|association_with_transcript=0bp_to_ENSMUST00000169401_5end|description=CAGE_peak_5_at_Ttc39c_5end|id=chr18:12758403..12758434,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.35e-39!24;UBERON:0003135!1.71e-38!15;UBERON:0000991!1.10e-36!18;UBERON:0005564!1.10e-36!18;UBERON:0005156!2.66e-36!26;UBERON:0000990!2.66e-36!26;UBERON:0003101!6.21e-36!16;UBERON:0000079!6.21e-36!16;UBERON:0000473!1.71e-35!14;UBERON:0004176!1.36e-33!17;UBERON:0009196!1.36e-33!17;UBERON:0009117!1.36e-33!17;UBERON:0003886!2.35e-18!38;UBERON:0002553!8.26e-18!39;UBERON:0002323!1.93e-16!37;UBERON:0004458!1.93e-16!37;UBERON:0000464!3.01e-11!57;UBERON:0005631!1.82e-10!3;UBERON:0000478!1.82e-10!3;UBERON:0000158!1.82e-10!3;UBERON:0001987!1.42e-07!2;UBERON:0003124!1.42e-07!2;UBERON:0004340!1.42e-07!2;UBERON:0000466!2.70e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.90e-56,14;UBERON:0003135,2.81e-52,15;UBERON:0003101,5.47e-49,16;UBERON:0000079,5.47e-49,16;UBERON:0004176,4.38e-46,17;UBERON:0009196,4.38e-46,17;UBERON:0009117,4.38e-46,17;UBERON:0000991,1.67e-43,18;UBERON:0005564,1.67e-43,18;UBERON:0003133,1.60e-32,24;UBERON:0005156,5.53e-30,26;UBERON:0000990,5.53e-30,26;UBERON:0002323,6.49e-21,37;UBERON:0004458,6.49e-21,37;UBERON:0003886,2.39e-20,38;UBERON:0002553,8.21e-20,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3661822407886,1.49516546043979,0.66183396182839,1.94451188344048,1.54991788173277,1.35164900392623,1.29092962510329,1.17183946359555,3.8797957437513,17.8772249411244,13.5374102941197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Ttc39c}} | ||
|EntrezGene=72747 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=E9PV21 | |||
|association_with_transcript=0bp_to_ENSMUST00000169401_5end | |||
|description=CAGE_peak_5_at_Ttc39c_5end | |||
|id=chr18:12758403..12758434,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.35e-39!24;UBERON:0003135!1.71e-38!15;UBERON:0000991!1.10e-36!18;UBERON:0005564!1.10e-36!18;UBERON:0005156!2.66e-36!26;UBERON:0000990!2.66e-36!26;UBERON:0003101!6.21e-36!16;UBERON:0000079!6.21e-36!16;UBERON:0000473!1.71e-35!14;UBERON:0004176!1.36e-33!17;UBERON:0009196!1.36e-33!17;UBERON:0009117!1.36e-33!17;UBERON:0003886!2.35e-18!38;UBERON:0002553!8.26e-18!39;UBERON:0002323!1.93e-16!37;UBERON:0004458!1.93e-16!37;UBERON:0000464!3.01e-11!57;UBERON:0005631!1.82e-10!3;UBERON:0000478!1.82e-10!3;UBERON:0000158!1.82e-10!3;UBERON:0001987!1.42e-07!2;UBERON:0003124!1.42e-07!2;UBERON:0004340!1.42e-07!2;UBERON:0000466!2.70e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.90e-56,14;UBERON:0003135,2.81e-52,15;UBERON:0003101,5.47e-49,16;UBERON:0000079,5.47e-49,16;UBERON:0004176,4.38e-46,17;UBERON:0009196,4.38e-46,17;UBERON:0009117,4.38e-46,17;UBERON:0000991,1.67e-43,18;UBERON:0005564,1.67e-43,18;UBERON:0003133,1.60e-32,24;UBERON:0005156,5.53e-30,26;UBERON:0000990,5.53e-30,26;UBERON:0002323,6.49e-21,37;UBERON:0004458,6.49e-21,37;UBERON:0003886,2.39e-20,38;UBERON:0002553,8.21e-20,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3661822407886,1.49516546043979,0.66183396182839,1.94451188344048,1.54991788173277,1.35164900392623,1.29092962510329,1.17183946359555,3.8797957437513,17.8772249411244,13.5374102941197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Ttc39c | |||
}} |
Revision as of 15:42, 13 September 2013
Short description: | p5@Ttc39c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ttc39c_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000169401_5end |
EntrezGene: | Ttc39c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.90e-56 | 14 |
male reproductive organ | 2.81e-52 | 15 |
male organism | 5.47e-49 | 16 |
male reproductive system | 5.47e-49 | 16 |
external genitalia | 4.38e-46 | 17 |
indifferent external genitalia | 4.38e-46 | 17 |
indifferent gonad | 4.38e-46 | 17 |
gonad | 1.67e-43 | 18 |
gonad primordium | 1.67e-43 | 18 |
reproductive organ | 1.60e-32 | 24 |
reproductive structure | 5.53e-30 | 26 |
reproductive system | 5.53e-30 | 26 |
body cavity | 6.49e-21 | 37 |
body cavity or lining | 6.49e-21 | 37 |
body cavity precursor | 2.39e-20 | 38 |
anatomical cavity | 8.21e-20 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.