FFCP PHASE1:Mm9::chr18:21458630..21458669,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=381126|HGNC=|UniProt=G5E8B7,Q3UFT3|association_with_transcript=0bp_to_ENSMUST00000049260,NM_001033445,uc008efg.1,uc008efh.1_5end|description=CAGE_peak_1_at_Fam59a_5end|id=chr18:21458630..21458669,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.33e-13!49;UBERON:0005173!3.33e-13!49;UBERON:0002417!3.33e-13!49;UBERON:0000916!3.33e-13!49;UBERON:0003914!3.53e-10!47;UBERON:0002107!7.28e-10!22;UBERON:0007499!7.28e-10!22;UBERON:0006925!7.28e-10!22;UBERON:0009497!7.28e-10!22;UBERON:0000015!7.28e-10!22;UBERON:0002423!7.28e-10!22;UBERON:0006235!7.28e-10!22;UBERON:0008835!7.28e-10!22;UBERON:0003894!7.28e-10!22;UBERON:0004161!7.28e-10!22;UBERON:0008836!7.28e-10!22;UBERON:0002365!7.62e-10!25;UBERON:0002330!7.62e-10!25;UBERON:0004111!4.82e-09!122;UBERON:0009854!5.71e-09!23;UBERON:0009856!5.71e-09!23;UBERON:0000468!1.51e-07!333;UBERON:0003103!1.93e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.25e-13,49;UBERON:0005173,3.25e-13,49;UBERON:0002417,3.25e-13,49;UBERON:0000916,3.25e-13,49;UBERON:0003914,3.46e-10,47;UBERON:0002107,7.15e-10,22;UBERON:0007499,7.15e-10,22;UBERON:0006925,7.15e-10,22;UBERON:0009497,7.15e-10,22;UBERON:0000015,7.15e-10,22;UBERON:0002423,7.15e-10,22;UBERON:0006235,7.15e-10,22;UBERON:0008835,7.15e-10,22;UBERON:0003894,7.15e-10,22;UBERON:0004161,7.15e-10,22;UBERON:0008836,7.15e-10,22;UBERON:0002365,7.48e-10,25;UBERON:0002330,7.48e-10,25;UBERON:0004111,4.74e-09,122;UBERON:0009854,5.62e-09,23;UBERON:0009856,5.62e-09,23;UBERON:0003104,3.50e-08,61;UBERON:0009142,3.50e-08,61;UBERON:0003103,1.90e-07,43|phase1_expression=19.6983081938897,37.3403686174116,32.7599452360466,31.4562779759103,24.0429950374247,10.2406355866253,11.2134067485852,0.129123323441576,0,0,0,0,0,0,21.9852442798337,24.0945568193893,30.0811607595103,0,0.274228867211478,1.27316895539409,9.18467533631554,0,0,6.39969691173627,5.73523202667925,17.8011908875656,10.7690499039769,10.9890328669803,12.9215925230334,14.1136872665561,7.53883736228036,8.89042942843484,10.4561013889377,31.6963362030877,10.9763615505484,5.81821258754723,5.9209113316087,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.88845226963366,2.02753862439029,4.40512205188036,2.34717403304412,8.93903141159831,13.8402295122717,10.4992145500113,4.33957907038624,7.18762821824858,0.167782606057736,0,0,2.82985379639542,2.86533439938757,5.67239301505187,10.5204559646991,15.340738398889,9.50747105259269,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,5.76327457982332,10.2652716185393,9.04539786822327,9.25429829946081,12.5686433137674,12.8103753751936,4.40966877173835,6.22995561618536,7.35375029288017,17.6185409599022,17.7485399938411,15.8214729253931,12.0016521834476,9.33173964744578,10.4182674111352,12.5632349550621,10.6924895906019,17.2662019987795,17.0884579574727,16.9422300150933,14.911955666024,5.07365495332333,12.318164297406,8.98579914975201,12.0459342777394,14.2793980078628,25.3660500069774,25.3412802804591,32.2579358710082,12.3591089715942,2.55645483867087,1.03914401841148,1.06001872353102,22.8166340038222,0,0,0,3.46385665617943,3.54703811665138,3.53867111510348,20.3247305899927,0,13.5082346548991,11.1030609130327,11.5696881758614,13.1450833435953,13.1128697280782,13.4051126134703,7.79132866243988,35.1016854182811,5.35017620603673,23.8844849026466,9.54424414689714,15.4589062922275,16.9706338597328,5.59175283654366,12.0040126774734,13.6140359428746,12.517395705221,0.599075622529601,1.19980546198682,1.39777249780371,18.4242486467932,47.5800626931372,10.6806199295935,21.5542157038423,20.9686675010871,14.5451631191692,20.766881672673,9.47106083807942,17.9146037678534,22.7450482590307,21.2546274445339,9.62891277924007,8.04657365517155,8.82304436046211,9.0422890701429,12.858898339601,9.48041530107888,7.96464658757695,17.8505325809921,9.05385570317937,12.8592134514117,15.4836989264275,9.42541649438572,17.5169767012127,16.0195996600197,15.2278780941878,7.96137067273973,1.40442637462647,0.51469581422943,0.284163499395593,15.3273071676271,17.12040237862,14.0448407939592,21.5437709382541,23.0214151144462,22.3687313686698,33.7174219888091,27.0956135413615,29.0745702494252,27.6460547854647,21.5059377943615,26.7527071501324,26.0235977617092,20.8572609526498,27.5123158458762,33.8566817188245,19.9634948015812,9.25172592354634,10.3135720998782,9.81125952462076,9.98617688999886,14.5620231293965,12.7060620512706,12.6755484991576,11.4135375667535,9.49058123089023,18.9403797932613,19.604146286421,17.9060824837036,20.2762650603885,11.6846523125049,9.51007419448655,11.3510525754989,10.0523987505133,17.8227679671177,28.1769339182701,23.0126000465205,25.0198708446237,24.9683518809534,20.5518745653836,20.0749801252259,23.7068079040476,22.9518724894549,26.6807364378434,30.5326543460452,30.0735262523201,29.6817988348007,31.849039057995,30.1471449690521,22.9163266603278,23.0156909960649,23.3474726556051,20.0429831627299,27.3159592401974,29.3991348658118,20.594486425561,35.6136217905428,27.0890094418087,32.3237159313456,5.54259570499814,9.66406200029472,10.2667935158476,6.95954851678271,6.80601720036656,9.21284415929987,9.52174563544055,12.2934198150413,9.30047350226527,9.7444463445461,7.81328366421687,7.86543910635542,5.18054945597687,8.10034728056465,0,0.54390568381871,13.277635371514,10.4855963595798,14.9312048688647,15.9407893765396,11.9672510124973,13.8859009962405,14.5133780931478,17.1793047490521,25.8508077279359,15.5329718669159,21.8342700600746,15.0030561318081,7.69140333182299,15.7818163272108,15.0209355619679,60.4084074872997,9.65192579416227,6.58842733568844,10.9134262766896,11.3829384851049,13.2745138339963,9.22566417388929,9.37203026590728,8.11001842950362,5.02013217897314,7.99331384654211,13.6966995379157,8.72480950746013,8.19943970284859,13.5895805912401,8.4334886859999,11.3449097573006,7.83011093233712,10.443543453816,5.43306471887569,8.78781843629528,11.8817956540323,13.0209236849512,10.2020392773315,8.22055362609418,3.28540391289194,4.2366414172764,25.3607657763206,17.3130565588554,23.4123418709063,18.8779455025128,20.2932984805332,28.0680938564055,19.5292160542,19.8405073151245,19.4792804109552,9.90656966223468,10.5560880600736,29.7622162067412,31.5763666035568,22.8778173206523,1.86976272993241,1.39951452323658,1.52019971184866,13.3653886522116,11.5462637657114,12.6058069618646,13.1766515802598,12.5452977608681,16.1588297172171,11.1937407499401,19.1756017282779,11.7790173892813,13.2207272757629,30.4456263412594,5.07323644815771,9.56905894681464,7.1147150896552,8.5558522871381,9.42866711387437,8.61676240002969,10.9142231940551,11.4579858662676,15.3094642861538,9.90494895386625,6.62469014393091,0.316011120628178,6.89265731986558,5.13554785824136,4.15746633528944,3.40150721768215,2.98022032171897,1.20195449519969,0.590758108698309,0.605798699688886,0.838274873204998,0.705783295957884,0.974578807397524,0.673482891482306,0.116876902181569,19.0453522236778,2.88581739386284,2.15313255862742,1.84673078000486,18.9325802151547,6.56888664079137,15.0184331899157,20.7937327706694,40.1257683228291,21.4605700194485,16.5717085142584,22.9158205375759,12.3734291287455,17.1270629942661,12.8416962556249,20.925697507186,13.5096360967266,21.7508356312418,19.6748918465692,7.47268902606072,15.5619700626402,17.2440941811676,13.3708694387562,14.6729213839588,11.2144540154509,9.11211583986622,12.1560683770948,15.0832028508153,14.9091354940641,11.660047794951,15.6559863350443,10.2069243142172,12.4849047189495,13.2675933287467,10.4784612082276,15.5284996766106,10.8029163459675,13.1867488257058,13.2479028120958,14.7433778525729,10.8260241757196,11.2065009275241,14.2439488299682,15.0575008664529,12.3537327521848,12.9878860739669,9.2074399003245,11.5433496768983,16.8342681497322,11.6262317761691,10.5399796141853,11.0492381655816,13.0146946596211,15.4325288784913,17.2369298777183,15.439486157397,13.3220053509945,15.4943548975763,13.67666798541,7.88350641109433|short_description=p1@Fam59a}} | ||
|EntrezGene=381126 | |||
|HGNC= | |||
|UniProt=G5E8B7,Q3UFT3 | |||
|association_with_transcript=0bp_to_ENSMUST00000049260,NM_001033445,uc008efg.1,uc008efh.1_5end | |||
|description=CAGE_peak_1_at_Fam59a_5end | |||
|id=chr18:21458630..21458669,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.33e-13!49;UBERON:0005173!3.33e-13!49;UBERON:0002417!3.33e-13!49;UBERON:0000916!3.33e-13!49;UBERON:0003914!3.53e-10!47;UBERON:0002107!7.28e-10!22;UBERON:0007499!7.28e-10!22;UBERON:0006925!7.28e-10!22;UBERON:0009497!7.28e-10!22;UBERON:0000015!7.28e-10!22;UBERON:0002423!7.28e-10!22;UBERON:0006235!7.28e-10!22;UBERON:0008835!7.28e-10!22;UBERON:0003894!7.28e-10!22;UBERON:0004161!7.28e-10!22;UBERON:0008836!7.28e-10!22;UBERON:0002365!7.62e-10!25;UBERON:0002330!7.62e-10!25;UBERON:0004111!4.82e-09!122;UBERON:0009854!5.71e-09!23;UBERON:0009856!5.71e-09!23;UBERON:0000468!1.51e-07!333;UBERON:0003103!1.93e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.25e-13,49;UBERON:0005173,3.25e-13,49;UBERON:0002417,3.25e-13,49;UBERON:0000916,3.25e-13,49;UBERON:0003914,3.46e-10,47;UBERON:0002107,7.15e-10,22;UBERON:0007499,7.15e-10,22;UBERON:0006925,7.15e-10,22;UBERON:0009497,7.15e-10,22;UBERON:0000015,7.15e-10,22;UBERON:0002423,7.15e-10,22;UBERON:0006235,7.15e-10,22;UBERON:0008835,7.15e-10,22;UBERON:0003894,7.15e-10,22;UBERON:0004161,7.15e-10,22;UBERON:0008836,7.15e-10,22;UBERON:0002365,7.48e-10,25;UBERON:0002330,7.48e-10,25;UBERON:0004111,4.74e-09,122;UBERON:0009854,5.62e-09,23;UBERON:0009856,5.62e-09,23;UBERON:0003104,3.50e-08,61;UBERON:0009142,3.50e-08,61;UBERON:0003103,1.90e-07,43 | |||
|phase1_expression=19.6983081938897,37.3403686174116,32.7599452360466,31.4562779759103,24.0429950374247,10.2406355866253,11.2134067485852,0.129123323441576,0,0,0,0,0,0,21.9852442798337,24.0945568193893,30.0811607595103,0,0.274228867211478,1.27316895539409,9.18467533631554,0,0,6.39969691173627,5.73523202667925,17.8011908875656,10.7690499039769,10.9890328669803,12.9215925230334,14.1136872665561,7.53883736228036,8.89042942843484,10.4561013889377,31.6963362030877,10.9763615505484,5.81821258754723,5.9209113316087,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.88845226963366,2.02753862439029,4.40512205188036,2.34717403304412,8.93903141159831,13.8402295122717,10.4992145500113,4.33957907038624,7.18762821824858,0.167782606057736,0,0,2.82985379639542,2.86533439938757,5.67239301505187,10.5204559646991,15.340738398889,9.50747105259269,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,5.76327457982332,10.2652716185393,9.04539786822327,9.25429829946081,12.5686433137674,12.8103753751936,4.40966877173835,6.22995561618536,7.35375029288017,17.6185409599022,17.7485399938411,15.8214729253931,12.0016521834476,9.33173964744578,10.4182674111352,12.5632349550621,10.6924895906019,17.2662019987795,17.0884579574727,16.9422300150933,14.911955666024,5.07365495332333,12.318164297406,8.98579914975201,12.0459342777394,14.2793980078628,25.3660500069774,25.3412802804591,32.2579358710082,12.3591089715942,2.55645483867087,1.03914401841148,1.06001872353102,22.8166340038222,0,0,0,3.46385665617943,3.54703811665138,3.53867111510348,20.3247305899927,0,13.5082346548991,11.1030609130327,11.5696881758614,13.1450833435953,13.1128697280782,13.4051126134703,7.79132866243988,35.1016854182811,5.35017620603673,23.8844849026466,9.54424414689714,15.4589062922275,16.9706338597328,5.59175283654366,12.0040126774734,13.6140359428746,12.517395705221,0.599075622529601,1.19980546198682,1.39777249780371,18.4242486467932,47.5800626931372,10.6806199295935,21.5542157038423,20.9686675010871,14.5451631191692,20.766881672673,9.47106083807942,17.9146037678534,22.7450482590307,21.2546274445339,9.62891277924007,8.04657365517155,8.82304436046211,9.0422890701429,12.858898339601,9.48041530107888,7.96464658757695,17.8505325809921,9.05385570317937,12.8592134514117,15.4836989264275,9.42541649438572,17.5169767012127,16.0195996600197,15.2278780941878,7.96137067273973,1.40442637462647,0.51469581422943,0.284163499395593,15.3273071676271,17.12040237862,14.0448407939592,21.5437709382541,23.0214151144462,22.3687313686698,33.7174219888091,27.0956135413615,29.0745702494252,27.6460547854647,21.5059377943615,26.7527071501324,26.0235977617092,20.8572609526498,27.5123158458762,33.8566817188245,19.9634948015812,9.25172592354634,10.3135720998782,9.81125952462076,9.98617688999886,14.5620231293965,12.7060620512706,12.6755484991576,11.4135375667535,9.49058123089023,18.9403797932613,19.604146286421,17.9060824837036,20.2762650603885,11.6846523125049,9.51007419448655,11.3510525754989,10.0523987505133,17.8227679671177,28.1769339182701,23.0126000465205,25.0198708446237,24.9683518809534,20.5518745653836,20.0749801252259,23.7068079040476,22.9518724894549,26.6807364378434,30.5326543460452,30.0735262523201,29.6817988348007,31.849039057995,30.1471449690521,22.9163266603278,23.0156909960649,23.3474726556051,20.0429831627299,27.3159592401974,29.3991348658118,20.594486425561,35.6136217905428,27.0890094418087,32.3237159313456,5.54259570499814,9.66406200029472,10.2667935158476,6.95954851678271,6.80601720036656,9.21284415929987,9.52174563544055,12.2934198150413,9.30047350226527,9.7444463445461,7.81328366421687,7.86543910635542,5.18054945597687,8.10034728056465,0,0.54390568381871,13.277635371514,10.4855963595798,14.9312048688647,15.9407893765396,11.9672510124973,13.8859009962405,14.5133780931478,17.1793047490521,25.8508077279359,15.5329718669159,21.8342700600746,15.0030561318081,7.69140333182299,15.7818163272108,15.0209355619679,60.4084074872997,9.65192579416227,6.58842733568844,10.9134262766896,11.3829384851049,13.2745138339963,9.22566417388929,9.37203026590728,8.11001842950362,5.02013217897314,7.99331384654211,13.6966995379157,8.72480950746013,8.19943970284859,13.5895805912401,8.4334886859999,11.3449097573006,7.83011093233712,10.443543453816,5.43306471887569,8.78781843629528,11.8817956540323,13.0209236849512,10.2020392773315,8.22055362609418,3.28540391289194,4.2366414172764,25.3607657763206,17.3130565588554,23.4123418709063,18.8779455025128,20.2932984805332,28.0680938564055,19.5292160542,19.8405073151245,19.4792804109552,9.90656966223468,10.5560880600736,29.7622162067412,31.5763666035568,22.8778173206523,1.86976272993241,1.39951452323658,1.52019971184866,13.3653886522116,11.5462637657114,12.6058069618646,13.1766515802598,12.5452977608681,16.1588297172171,11.1937407499401,19.1756017282779,11.7790173892813,13.2207272757629,30.4456263412594,5.07323644815771,9.56905894681464,7.1147150896552,8.5558522871381,9.42866711387437,8.61676240002969,10.9142231940551,11.4579858662676,15.3094642861538,9.90494895386625,6.62469014393091,0.316011120628178,6.89265731986558,5.13554785824136,4.15746633528944,3.40150721768215,2.98022032171897,1.20195449519969,0.590758108698309,0.605798699688886,0.838274873204998,0.705783295957884,0.974578807397524,0.673482891482306,0.116876902181569,19.0453522236778,2.88581739386284,2.15313255862742,1.84673078000486,18.9325802151547,6.56888664079137,15.0184331899157,20.7937327706694,40.1257683228291,21.4605700194485,16.5717085142584,22.9158205375759,12.3734291287455,17.1270629942661,12.8416962556249,20.925697507186,13.5096360967266,21.7508356312418,19.6748918465692,7.47268902606072,15.5619700626402,17.2440941811676,13.3708694387562,14.6729213839588,11.2144540154509,9.11211583986622,12.1560683770948,15.0832028508153,14.9091354940641,11.660047794951,15.6559863350443,10.2069243142172,12.4849047189495,13.2675933287467,10.4784612082276,15.5284996766106,10.8029163459675,13.1867488257058,13.2479028120958,14.7433778525729,10.8260241757196,11.2065009275241,14.2439488299682,15.0575008664529,12.3537327521848,12.9878860739669,9.2074399003245,11.5433496768983,16.8342681497322,11.6262317761691,10.5399796141853,11.0492381655816,13.0146946596211,15.4325288784913,17.2369298777183,15.439486157397,13.3220053509945,15.4943548975763,13.67666798541,7.88350641109433 | |||
|short_description=p1@Fam59a | |||
}} |
Revision as of 15:47, 13 September 2013
Short description: | p1@Fam59a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam59a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000049260, NM_001033445, uc008efg.1, uc008efh.1_5end |
EntrezGene: | Fam59a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.25e-13 | 49 |
abdominal segment element | 3.25e-13 | 49 |
abdominal segment of trunk | 3.25e-13 | 49 |
abdomen | 3.25e-13 | 49 |
epithelial tube | 3.46e-10 | 47 |
liver | 7.15e-10 | 22 |
epithelial sac | 7.15e-10 | 22 |
digestive gland | 7.15e-10 | 22 |
epithelium of foregut-midgut junction | 7.15e-10 | 22 |
anatomical boundary | 7.15e-10 | 22 |
hepatobiliary system | 7.15e-10 | 22 |
foregut-midgut junction | 7.15e-10 | 22 |
hepatic diverticulum | 7.15e-10 | 22 |
liver primordium | 7.15e-10 | 22 |
septum transversum | 7.15e-10 | 22 |
liver bud | 7.15e-10 | 22 |
exocrine gland | 7.48e-10 | 25 |
exocrine system | 7.48e-10 | 25 |
anatomical conduit | 4.74e-09 | 122 |
digestive tract diverticulum | 5.62e-09 | 23 |
sac | 5.62e-09 | 23 |
mesenchyme | 3.50e-08 | 61 |
entire embryonic mesenchyme | 3.50e-08 | 61 |
compound organ | 1.90e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.