FFCP PHASE1:Mm9::chr19:46575430..46575435,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46575430..46575435,-|id=chr19:46575430..46575435,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0002603,4.13e-10,2;CL:0002476,5.06e-10,2;CL:0000215,3.18e-07,3;CL:0000120,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.32e-08!102;UBERON:0000924!3.32e-08!102;UBERON:0006601!3.32e-08!102;UBERON:0002346!2.06e-07!71;UBERON:0003075!2.06e-07!71;UBERON:0007284!2.06e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1|phase1_expression=0.320297694209588,0,0,0.30246421130683,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.367093504323363,1.56478268869608,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0,0.420649922702764,0,0.220868540951614,0.122490799214954,0.479227355091182,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0.226714680320357,6.37701875143691,0,0,0,0,0,0,0.852151612890289,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0,0,0,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.632671987162271,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0,0,0,0,0|short_description=p@chr19:46575430..46575435,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:46575430..46575435,- | |||
|id=chr19:46575430..46575435,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0002603,4.13e-10,2;CL:0002476,5.06e-10,2;CL:0000215,3.18e-07,3;CL:0000120,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.32e-08!102;UBERON:0000924!3.32e-08!102;UBERON:0006601!3.32e-08!102;UBERON:0002346!2.06e-07!71;UBERON:0003075!2.06e-07!71;UBERON:0007284!2.06e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.367093504323363,1.56478268869608,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0,0.420649922702764,0,0.220868540951614,0.122490799214954,0.479227355091182,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0.226714680320357,6.37701875143691,0,0,0,0,0,0,0.852151612890289,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0,0,0,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.632671987162271,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr19:46575430..46575435,- | |||
}} |
Revision as of 17:52, 13 September 2013
Short description: | p@chr19:46575430..46575435, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46575430..46575435, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
astrocyte of the cerebellum | 4.13e-10 | 2 |
bone marrow macrophage | 5.06e-10 | 2 |
barrier cell | 3.18e-07 | 3 |
granule cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.