FFCP PHASE1:Mm9::chr1:132730972..132730993,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=140|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132730972..132730993,+|id=chr1:132730972..132730993,+|ontology_enrichment_celltype=CL:0000066!1.93e-14!25;CL:0000223!1.78e-13!20;CL:0002563!9.19e-11!9;CL:0002251!9.19e-11!9;CL:0002076!3.21e-08!15;CL:0000239!1.47e-07!6;CL:0000677!1.47e-07!6;CL:0000212!1.47e-07!6;CL:0000584!1.47e-07!6;CL:0000181!2.72e-07!5;CL:0000417!2.72e-07!5;CL:0000668!2.72e-07!5;CL:0000412!2.72e-07!5;CL:0000182!2.72e-07!5|ontology_enrichment_celltype_v019_2=CL:0002563,4.92e-12,9;CL:0002251,4.92e-12,9;CL:0000066,7.90e-12,25;CL:0000223,1.62e-11,20;CL:0000239,1.53e-07,6;CL:0000677,1.53e-07,6;CL:0000584,1.53e-07,6;CL:0000182,4.44e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.31e-20!43;UBERON:0001007!1.57e-18!128;UBERON:0001555!1.57e-18!128;UBERON:0007026!1.57e-18!128;UBERON:0004119!5.19e-18!130;UBERON:0000925!5.19e-18!130;UBERON:0006595!5.19e-18!130;UBERON:0000344!1.03e-17!15;UBERON:0004921!6.52e-17!126;UBERON:0004185!6.52e-17!126;UBERON:0005409!7.51e-16!59;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0007023!4.84e-12!51;UBERON:0003350!9.19e-11!9;UBERON:0004808!9.19e-11!9;UBERON:0001277!9.19e-11!9;UBERON:0004923!1.92e-09!24;UBERON:0000485!2.02e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-29,31;UBERON:0000344,6.84e-22,15;UBERON:0005409,3.43e-19,47;UBERON:0001242,9.93e-19,13;UBERON:0001262,9.93e-19,13;UBERON:0004786,9.93e-19,13;UBERON:0001007,1.79e-15,116;UBERON:0001555,1.79e-15,116;UBERON:0007026,1.79e-15,116;UBERON:0004119,4.62e-15,118;UBERON:0000925,4.62e-15,118;UBERON:0006595,4.62e-15,118;UBERON:0004921,1.16e-13,114;UBERON:0004923,1.99e-12,24;UBERON:0003350,4.92e-12,9;UBERON:0004808,4.92e-12,9;UBERON:0001277,4.92e-12,9;UBERON:0007023,1.39e-10,51;UBERON:0000485,1.35e-09,11;UBERON:0002108,2.71e-08,4|phase1_expression=0,2.79180326111489,0.454999239389536,6.95667686005709,4.50806156951712,2.35030980676646,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,4.7997726838022,2.52350209173887,1.14846392823004,0.86152399231815,1.939241094173,11.5914285868388,4.53654233567875,1.10865255327652,0,0,0,2.88851619751275,2.82598897109437,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,21.759082678648,9.71465744948071,11.0461990966104,8.06448396775204,5.89866564553358,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,20.895649988588,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,31.6865994070808,0,0,174.477168707468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.0225510394194,21.4204958997471,0,0,0,0,0.22237804384487,0.570676878337677,71.6538882932213,1.4822905925161,2.01068167040216,0.994782360205754,3.8992817423824,81.7925661875342,28.0979464837102,31.0660386276813,0,0,0,0,0,0,0,0,0,0,13.0439155918346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,16.4030797263545,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,6.88469982226651,3.86311444826625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.31976098378028,2.65490276679926,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20528398054962,0,0,0,0,0,49.2602613904448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,10.7580427832188,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,3.37828455812128,10.9890974560359,1.50057865355346,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132730972..132730993,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=140 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:132730972..132730993,+ | |||
|id=chr1:132730972..132730993,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.93e-14!25;CL:0000223!1.78e-13!20;CL:0002563!9.19e-11!9;CL:0002251!9.19e-11!9;CL:0002076!3.21e-08!15;CL:0000239!1.47e-07!6;CL:0000677!1.47e-07!6;CL:0000212!1.47e-07!6;CL:0000584!1.47e-07!6;CL:0000181!2.72e-07!5;CL:0000417!2.72e-07!5;CL:0000668!2.72e-07!5;CL:0000412!2.72e-07!5;CL:0000182!2.72e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.92e-12,9;CL:0002251,4.92e-12,9;CL:0000066,7.90e-12,25;CL:0000223,1.62e-11,20;CL:0000239,1.53e-07,6;CL:0000677,1.53e-07,6;CL:0000584,1.53e-07,6;CL:0000182,4.44e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.31e-20!43;UBERON:0001007!1.57e-18!128;UBERON:0001555!1.57e-18!128;UBERON:0007026!1.57e-18!128;UBERON:0004119!5.19e-18!130;UBERON:0000925!5.19e-18!130;UBERON:0006595!5.19e-18!130;UBERON:0000344!1.03e-17!15;UBERON:0004921!6.52e-17!126;UBERON:0004185!6.52e-17!126;UBERON:0005409!7.51e-16!59;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0007023!4.84e-12!51;UBERON:0003350!9.19e-11!9;UBERON:0004808!9.19e-11!9;UBERON:0001277!9.19e-11!9;UBERON:0004923!1.92e-09!24;UBERON:0000485!2.02e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-29,31;UBERON:0000344,6.84e-22,15;UBERON:0005409,3.43e-19,47;UBERON:0001242,9.93e-19,13;UBERON:0001262,9.93e-19,13;UBERON:0004786,9.93e-19,13;UBERON:0001007,1.79e-15,116;UBERON:0001555,1.79e-15,116;UBERON:0007026,1.79e-15,116;UBERON:0004119,4.62e-15,118;UBERON:0000925,4.62e-15,118;UBERON:0006595,4.62e-15,118;UBERON:0004921,1.16e-13,114;UBERON:0004923,1.99e-12,24;UBERON:0003350,4.92e-12,9;UBERON:0004808,4.92e-12,9;UBERON:0001277,4.92e-12,9;UBERON:0007023,1.39e-10,51;UBERON:0000485,1.35e-09,11;UBERON:0002108,2.71e-08,4 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,6.95667686005709,4.50806156951712,2.35030980676646,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,4.7997726838022,2.52350209173887,1.14846392823004,0.86152399231815,1.939241094173,11.5914285868388,4.53654233567875,1.10865255327652,0,0,0,2.88851619751275,2.82598897109437,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,21.759082678648,9.71465744948071,11.0461990966104,8.06448396775204,5.89866564553358,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,20.895649988588,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,31.6865994070808,0,0,174.477168707468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.0225510394194,21.4204958997471,0,0,0,0,0.22237804384487,0.570676878337677,71.6538882932213,1.4822905925161,2.01068167040216,0.994782360205754,3.8992817423824,81.7925661875342,28.0979464837102,31.0660386276813,0,0,0,0,0,0,0,0,0,0,13.0439155918346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,16.4030797263545,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,6.88469982226651,3.86311444826625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.31976098378028,2.65490276679926,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20528398054962,0,0,0,0,0,49.2602613904448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,10.7580427832188,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,3.37828455812128,10.9890974560359,1.50057865355346,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132730972..132730993,+ | |||
}} |
Revision as of 18:45, 13 September 2013
Short description: | p@chr1:132730972..132730993, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132730972..132730993, + |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.92e-12 | 9 |
epithelial cell of alimentary canal | 4.92e-12 | 9 |
epithelial cell | 7.90e-12 | 25 |
endodermal cell | 1.62e-11 | 20 |
brush border epithelial cell | 1.53e-07 | 6 |
gut absorptive cell | 1.53e-07 | 6 |
enterocyte | 1.53e-07 | 6 |
hepatocyte | 4.44e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.12e-29 | 31 |
mucosa | 6.84e-22 | 15 |
gastrointestinal system | 3.43e-19 | 47 |
intestinal mucosa | 9.93e-19 | 13 |
wall of intestine | 9.93e-19 | 13 |
gastrointestinal system mucosa | 9.93e-19 | 13 |
digestive system | 1.79e-15 | 116 |
digestive tract | 1.79e-15 | 116 |
primitive gut | 1.79e-15 | 116 |
endoderm-derived structure | 4.62e-15 | 118 |
endoderm | 4.62e-15 | 118 |
presumptive endoderm | 4.62e-15 | 118 |
subdivision of digestive tract | 1.16e-13 | 114 |
organ component layer | 1.99e-12 | 24 |
epithelium of mucosa | 4.92e-12 | 9 |
gastrointestinal system epithelium | 4.92e-12 | 9 |
intestinal epithelium | 4.92e-12 | 9 |
adult organism | 1.39e-10 | 51 |
simple columnar epithelium | 1.35e-09 | 11 |
small intestine | 2.71e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.