FFCP PHASE1:Hg19::chr6:152126790..152126828,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2099|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3467|TSSclassifier=S|UniProt=E7EVR3,P03372|association_with_transcript=0bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end|coexpression_cluster_id=C233|description=CAGE_peak_3_at_ESR1_5end|id=chr6:152126790..152126828,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002149;2.66e-13;6!CL:0002255;2.66e-13;6|ontology_enrichment_celltype_v019_2=CL:0002149,2.30e-13,6;CL:0002255,2.30e-13,6|ontology_enrichment_development_v019=UBERON:0005795;1.59e-30;10!UBERON:0006603;8.92e-16;65!UBERON:0007297;2.40e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;2.66e-13;6!DOID:0060084;3.45e-07;3!DOID:127;3.45e-07;3|ontology_enrichment_disease_v019_2=DOID:3001,2.30e-13,6;DOID:0060084,3.34e-07,3;DOID:127,3.34e-07,3|ontology_enrichment_uberon=UBERON:0007023!4.97e-30!115;UBERON:0004175!6.45e-13!25;UBERON:0005156!4.36e-12!59;UBERON:0000990!4.36e-12!59;UBERON:0003133!3.70e-11!48;UBERON:0005795!7.55e-11!22;UBERON:0003975!8.30e-11!22;UBERON:0000995!1.80e-09!21;UBERON:0003134!2.99e-07!37;UBERON:0000474!2.99e-07!37|ontology_enrichment_uberon_v019=UBERON:0004175;7.81e-32;21!UBERON:0003975;8.52e-26;18!UBERON:0000995;4.06e-22;17!UBERON:0003133;1.74e-15;44!UBERON:0003134;7.07e-15;33!UBERON:0000474;1.23e-12;37!UBERON:0000007;1.47e-11;2!UBERON:0005156;2.31e-10;59!UBERON:0000990;2.31e-10;59!UBERON:0003100;3.44e-09;41!UBERON:0006947;7.76e-08;3!UBERON:0004054;7.76e-08;3!UBERON:0001723;1.35e-07;3!UBERON:0001033;1.35e-07;3!UBERON:0003135;1.59e-07;11!UBERON:0006834;9.91e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.36e-26,25;UBERON:0005795,6.94e-21,22;UBERON:0003975,8.62e-21,22;UBERON:0003133,3.70e-20,48;UBERON:0005156,4.77e-18,59;UBERON:0000990,4.77e-18,59;UBERON:0000995,1.24e-17,21;UBERON:0007023,1.50e-14,114;UBERON:0003134,3.43e-14,37;UBERON:0000474,3.43e-14,37;UBERON:0003100,1.35e-12,41;UBERON:0000007,1.55e-11,2;UBERON:0006947,8.17e-08,3;UBERON:0004054,8.17e-08,3;UBERON:0001723,1.39e-07,3;UBERON:0001033,1.39e-07,3;UBERON:0010056,1.39e-07,3;UBERON:0003135,1.58e-07,11;UBERON:0006834,9.91e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,8.8410875960956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,4.74122638775565,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,7.26276772954822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.293016358543788,0,0.111443384277478,0,0,0,0,0,2.95405774462077,0,0,0,3.98495976502139,0,0,0,0,0,0,0,0,2.76201535783414,0,0,0.969332746095218,0,0,0.520855522170466,0,5.07499702804355,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,4.0432885840795,64.4073663676782,0,0,0,0,0.31900115973192,0.824378340616761,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,5.61804353109152,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,4.85967267338367,0.0979923974143777,0,15.9001268100247,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0,1.95952416065645,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,2.07119527673598,0,0,0,0,0,1.5041393641362,0.612691153526923,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0.346576998451015,0,0,0.596748666348824,11.6576008941349,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,9.42801238939659,0,0,0,0,8.49751845931284,20.7172594129681,0.443511850813194,0,0,0,0,0,0.111231401892069,1.49136876415977,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,4.23387050190929,8.7060610046739,1.24082554265728,1.91107787795487,0,0,0,0,1.84793052341245,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,1.71603825227734,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,1.51557396436479,0.267964130156178,0,0,4.90438158372256,0.952257725854961,0,0.0620747142958579,0,0.0636471582781649,1.61693751166575,4.57205170583619,3.08009970976753,0.5388164241167,0.358611026963382,0.665320713092027,0,0,0,0,2.34640942403454,74.2005566189999,22.7861859856814,5.3260541934841,0.603821380773079,0|short_description=p3@ESR1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3467 | |||
|TSSclassifier=S | |||
|UniProt=E7EVR3,P03372 | |||
|association_with_transcript=0bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_3_at_ESR1_5end | |||
|id=chr6:152126790..152126828,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.66e-13;6!CL:0002255;2.66e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.30e-13,6;CL:0002255,2.30e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.59e-30;10!UBERON:0006603;8.92e-16;65!UBERON:0007297;2.40e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;2.66e-13;6!DOID:0060084;3.45e-07;3!DOID:127;3.45e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.30e-13,6;DOID:0060084,3.34e-07,3;DOID:127,3.34e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.97e-30!115;UBERON:0004175!6.45e-13!25;UBERON:0005156!4.36e-12!59;UBERON:0000990!4.36e-12!59;UBERON:0003133!3.70e-11!48;UBERON:0005795!7.55e-11!22;UBERON:0003975!8.30e-11!22;UBERON:0000995!1.80e-09!21;UBERON:0003134!2.99e-07!37;UBERON:0000474!2.99e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;7.81e-32;21!UBERON:0003975;8.52e-26;18!UBERON:0000995;4.06e-22;17!UBERON:0003133;1.74e-15;44!UBERON:0003134;7.07e-15;33!UBERON:0000474;1.23e-12;37!UBERON:0000007;1.47e-11;2!UBERON:0005156;2.31e-10;59!UBERON:0000990;2.31e-10;59!UBERON:0003100;3.44e-09;41!UBERON:0006947;7.76e-08;3!UBERON:0004054;7.76e-08;3!UBERON:0001723;1.35e-07;3!UBERON:0001033;1.35e-07;3!UBERON:0003135;1.59e-07;11!UBERON:0006834;9.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.36e-26,25;UBERON:0005795,6.94e-21,22;UBERON:0003975,8.62e-21,22;UBERON:0003133,3.70e-20,48;UBERON:0005156,4.77e-18,59;UBERON:0000990,4.77e-18,59;UBERON:0000995,1.24e-17,21;UBERON:0007023,1.50e-14,114;UBERON:0003134,3.43e-14,37;UBERON:0000474,3.43e-14,37;UBERON:0003100,1.35e-12,41;UBERON:0000007,1.55e-11,2;UBERON:0006947,8.17e-08,3;UBERON:0004054,8.17e-08,3;UBERON:0001723,1.39e-07,3;UBERON:0001033,1.39e-07,3;UBERON:0010056,1.39e-07,3;UBERON:0003135,1.58e-07,11;UBERON:0006834,9.91e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,8.8410875960956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,4.74122638775565,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,7.26276772954822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.293016358543788,0,0.111443384277478,0,0,0,0,0,2.95405774462077,0,0,0,3.98495976502139,0,0,0,0,0,0,0,0,2.76201535783414,0,0,0.969332746095218,0,0,0.520855522170466,0,5.07499702804355,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,4.0432885840795,64.4073663676782,0,0,0,0,0.31900115973192,0.824378340616761,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,5.61804353109152,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,4.85967267338367,0.0979923974143777,0,15.9001268100247,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0,1.95952416065645,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,2.07119527673598,0,0,0,0,0,1.5041393641362,0.612691153526923,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0.346576998451015,0,0,0.596748666348824,11.6576008941349,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,9.42801238939659,0,0,0,0,8.49751845931284,20.7172594129681,0.443511850813194,0,0,0,0,0,0.111231401892069,1.49136876415977,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,4.23387050190929,8.7060610046739,1.24082554265728,1.91107787795487,0,0,0,0,1.84793052341245,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,1.71603825227734,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,1.51557396436479,0.267964130156178,0,0,4.90438158372256,0.952257725854961,0,0.0620747142958579,0,0.0636471582781649,1.61693751166575,4.57205170583619,3.08009970976753,0.5388164241167,0.358611026963382,0.665320713092027,0,0,0,0,2.34640942403454,74.2005566189999,22.7861859856814,5.3260541934841,0.603821380773079,0 | |||
|short_description=p3@ESR1 | |||
}} |
Revision as of 18:47, 13 September 2013
Short description: | p3@ESR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ESR1_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000431219, ENST00000456483, NM_001122741, uc010kin.2, uc010kio.2, uc010kip.2_5end |
EntrezGene: | ESR1 |
HGNC: | 3467 |
UniProt: | E7EVR3P03372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.30e-13 | 6 |
stromal cell of endometrium | 2.30e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 2.36e-26 | 25 |
embryonic uterus | 6.94e-21 | 22 |
internal female genitalia | 8.62e-21 | 22 |
reproductive organ | 3.70e-20 | 48 |
reproductive structure | 4.77e-18 | 59 |
reproductive system | 4.77e-18 | 59 |
uterus | 1.24e-17 | 21 |
adult organism | 1.50e-14 | 114 |
female reproductive organ | 3.43e-14 | 37 |
female reproductive system | 3.43e-14 | 37 |
female organism | 1.35e-12 | 41 |
pituitary gland | 1.55e-11 | 2 |
male genital duct | 8.17e-08 | 3 |
internal male genitalia | 8.17e-08 | 3 |
tongue | 1.39e-07 | 3 |
gustatory system | 1.39e-07 | 3 |
future tongue | 1.39e-07 | 3 |
male reproductive organ | 1.58e-07 | 11 |
uterus or analog | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.30e-13 | 6 |
cell type benign neoplasm | 3.34e-07 | 3 |
leiomyoma | 3.34e-07 | 3 |
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