FFCP PHASE1:Mm9::chr1:178144105..178144108,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319455|HGNC=|MCL_coexpression_id=30|UniProt=D3YYN6,Q3UNN8|association_with_transcript=-32bp_to_ENSMUST00000111167,NM_001195816,uc007dtv.2,uc007dtz.2_5end|description=CAGE_peak_25_at_Pld5_5end|id=chr1:178144105..178144108,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001894!2.00e-14!10;UBERON:0006222!2.00e-14!10;UBERON:0004733!2.71e-14!6;UBERON:0004732!2.71e-14!6;UBERON:0002028!2.71e-14!6;UBERON:0007277!2.71e-14!6;UBERON:0003076!2.57e-12!12;UBERON:0003057!2.57e-12!12;UBERON:0002616!3.26e-11!49;UBERON:0000955!5.57e-11!50;UBERON:0006238!5.57e-11!50;UBERON:0001049!1.48e-10!52;UBERON:0005068!1.48e-10!52;UBERON:0006241!1.48e-10!52;UBERON:0007135!1.48e-10!52;UBERON:0002037!4.16e-10!4;UBERON:0002680!4.16e-10!4;UBERON:0001895!4.16e-10!4;UBERON:0010092!4.16e-10!4;UBERON:0006215!4.16e-10!4;UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0000073!4.41e-09!75;UBERON:0001016!4.41e-09!75;UBERON:0000033!1.28e-08!63;UBERON:0002346!1.33e-07!71;UBERON:0003075!1.33e-07!71;UBERON:0007284!1.33e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,4.1889341362691,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p25@Pld5}} | ||
|EntrezGene=319455 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=D3YYN6,Q3UNN8 | |||
|association_with_transcript=-32bp_to_ENSMUST00000111167,NM_001195816,uc007dtv.2,uc007dtz.2_5end | |||
|description=CAGE_peak_25_at_Pld5_5end | |||
|id=chr1:178144105..178144108,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!2.00e-14!10;UBERON:0006222!2.00e-14!10;UBERON:0004733!2.71e-14!6;UBERON:0004732!2.71e-14!6;UBERON:0002028!2.71e-14!6;UBERON:0007277!2.71e-14!6;UBERON:0003076!2.57e-12!12;UBERON:0003057!2.57e-12!12;UBERON:0002616!3.26e-11!49;UBERON:0000955!5.57e-11!50;UBERON:0006238!5.57e-11!50;UBERON:0001049!1.48e-10!52;UBERON:0005068!1.48e-10!52;UBERON:0006241!1.48e-10!52;UBERON:0007135!1.48e-10!52;UBERON:0002037!4.16e-10!4;UBERON:0002680!4.16e-10!4;UBERON:0001895!4.16e-10!4;UBERON:0010092!4.16e-10!4;UBERON:0006215!4.16e-10!4;UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0000073!4.41e-09!75;UBERON:0001016!4.41e-09!75;UBERON:0000033!1.28e-08!63;UBERON:0002346!1.33e-07!71;UBERON:0003075!1.33e-07!71;UBERON:0007284!1.33e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,4.1889341362691,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@Pld5 | |||
}} |
Revision as of 19:50, 13 September 2013
Short description: | p25@Pld5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Pld5_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -32bp_to_ENSMUST00000111167, NM_001195816, uc007dtv.2, uc007dtz.2_5end |
EntrezGene: | Pld5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.54e-44 | 4 |
regional part of metencephalon | 4.54e-44 | 4 |
metencephalon | 4.54e-44 | 4 |
future metencephalon | 4.54e-44 | 4 |
rhombic lip | 4.54e-44 | 4 |
segmental subdivision of hindbrain | 6.66e-30 | 6 |
segmental subdivision of nervous system | 6.66e-30 | 6 |
hindbrain | 6.66e-30 | 6 |
presumptive hindbrain | 6.66e-30 | 6 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.