FFCP PHASE1:Hg19::chr6:28891709..28891769,-: Difference between revisions
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{{FFCP | 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263,21.2106046386603,33.3523874343409,29.2210790563039,23.1042522603925,55.8969474827849,23.1584003132367,52.7765463187307,40.4520160281076,37.3795285450546,14.4308045651446,36.6772610568575,34.9972878042597,14.5164528980959,39.1506896526453,36.9195842279364,41.072861093914,61.8145093278756,39.1772745210326,24.196098081817,33.4438628642102,37.8071359476538,30.6228728879558,22.7986519716844,6.47428837187895,12.4221996296059,45.2327628221898,47.5996773197957,34.6230405923916,44.3660228609851,44.4761139508106,28.123574427701,49.1434109852068,47.1004071928021,13.4283035107824,22.9487538529155,61.6115658233595,26.7211670711757,53.7342527391707,17.2751451061152,27.625315230419,30.8538681135882,20.0513995331624,32.8943712929488,43.6379901581117,28.2833471267549,26.2474289750317,38.8184358887261,45.3363721793801,14.6067277649303,49.0840333242859,37.6983103688317,62.4775386285011,31.6160429387753,57.5982911249298,41.7931204007166,45.0113971981769,31.4279427469364,40.2342702775124,36.8405960518431,24.9125504077226,40.0367263196141,47.7307723192474,26.721740526556,36.9417496130077,21.8115559184366,20.3086911224882,27.8682695362426,12.4375415918817,27.2028779116784,27.0807157014246,28.3296673441851,37.7845122540636,33.644495148355,40.8159979793433,30.86887176491,35.1683908787302,21.1185245460053,21.5606979683727,30.1063676975206,29.4061042109973,29.2741113760492,30.3634191918935,39.2756632829993,3.8614456457388,42.4873205964156,37.5425507845527,37.7726062525057,37.4344484050479,37.2823793543887,37.0343780207488,40.7121985225106|short_description=p1@TRIM27}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9975 | |||
|TSSclassifier=S | |||
|UniProt=P14373,Q59EC6 | |||
|association_with_transcript=0bp_to_ENST00000377194,ENST00000377199,NM_006510,uc003nlr.2,uc003nls.2,uc003nlt.1_5end | |||
|description=CAGE_peak_1_at_TRIM27_5end | |||
|id=chr6:28891709..28891769,- | |||
|ontology_enrichment_celltype=CL:0000003!2.27e-13!722;CL:0000548!4.29e-13!679;CL:0000004!4.29e-13!679;CL:0000255!4.29e-13!679;CL:0000012!1.11e-12!682;CL:0000066!3.61e-10!254;CL:0000144!1.43e-08!625;CL:0002321!3.75e-08!248;CL:0000220!8.04e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.15e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.81e-10,253;CL:0002321,2.52e-08,250;CL:1000449,4.65e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.16e-09!51;DOID:0060083!5.16e-09!51;DOID:1240!1.34e-08!39;DOID:8692!2.90e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.60e-07;39!DOID:8692;5.37e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.16e-09,51;DOID:0060083,5.16e-09,51;DOID:1240,1.34e-08,39;DOID:8692,2.90e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.15e-07;15!UBERON:0004819;4.15e-07;15!UBERON:0001285;4.15e-07;15!UBERON:0007684;4.15e-07;15!UBERON:0000353;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.65e-07,15;UBERON:0009773,4.65e-07,15;UBERON:0001231,4.65e-07,15;UBERON:0001285,4.65e-07,15;UBERON:0007684,4.65e-07,15;UBERON:0004208,4.65e-07,15 | |||
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| |||
|short_description=p1@TRIM27 | |||
}} |
Revision as of 19:54, 13 September 2013
Short description: | p1@TRIM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRIM27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377194, ENST00000377199, NM_006510, uc003nlr.2, uc003nls.2, uc003nlt.1_5end |
EntrezGene: | TRIM27 |
HGNC: | 9975 |
UniProt: | P14373Q59EC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.81e-10 | 253 |
embryonic cell | 2.52e-08 | 250 |
epithelial cell of nephron | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.65e-07 | 15 |
renal tubule | 4.65e-07 | 15 |
nephron tubule | 4.65e-07 | 15 |
nephron | 4.65e-07 | 15 |
uriniferous tubule | 4.65e-07 | 15 |
nephrogenic mesenchyme | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.16e-09 | 51 |
immune system cancer | 5.16e-09 | 51 |
leukemia | 1.34e-08 | 39 |
myeloid leukemia | 2.90e-07 | 31 |
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