FFCP PHASE1:Mm9::chr1:75503765..75503776,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16322|HGNC=|MCL_coexpression_id=919|UniProt=Q04997|association_with_transcript=113bp_to_ENSMUST00000037330,NM_010564,uc007bps.1_5end|description=CAGE_peak_3_at_Inha_5end|id=chr1:75503765..75503776,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.66e-21!18;UBERON:0005564!1.66e-21!18;UBERON:0004176!4.20e-20!17;UBERON:0009196!4.20e-20!17;UBERON:0009117!4.20e-20!17;UBERON:0003133!6.60e-17!24;UBERON:0000473!6.44e-16!14;UBERON:0005156!3.30e-15!26;UBERON:0000990!3.30e-15!26;UBERON:0003135!1.27e-14!15;UBERON:0003101!1.71e-13!16;UBERON:0000079!1.71e-13!16;UBERON:0002323!8.07e-12!37;UBERON:0004458!8.07e-12!37;UBERON:0002369!9.48e-12!7;UBERON:0006858!9.48e-12!7;UBERON:0003886!2.31e-11!38;UBERON:0002553!6.24e-11!39;UBERON:0002342!8.97e-08!10;UBERON:0005062!8.97e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.27e-35,18;UBERON:0005564,2.27e-35,18;UBERON:0000473,5.26e-33,14;UBERON:0004176,3.65e-32,17;UBERON:0009196,3.65e-32,17;UBERON:0009117,3.65e-32,17;UBERON:0003135,1.10e-30,15;UBERON:0003101,1.19e-28,16;UBERON:0000079,1.19e-28,16;UBERON:0003133,5.83e-26,24;UBERON:0005156,8.69e-24,26;UBERON:0000990,8.69e-24,26;UBERON:0002369,8.06e-20,7;UBERON:0006858,8.06e-20,7;UBERON:0002323,5.04e-16,37;UBERON:0004458,5.04e-16,37;UBERON:0003886,1.53e-15,38;UBERON:0002553,4.41e-15,39;UBERON:0000926,4.05e-11,120;UBERON:0004120,4.05e-11,120;UBERON:0006603,4.05e-11,120;UBERON:0003064,1.17e-09,14|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,10.235634279202,16.4411358288556,29.9800146432876,23.2112866451039,10.8181610564848,1.75933227861546,0.247194967734374,0,0,0.161766849947409,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,1.14248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,24.2717545706139,0.890328018336276,0.977321756121456,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,7.17679421011098,16.2149320647956,25.8620080497583,34.7439925155097,33.1154005961925,30.982311002479,19.2702489569046,19.7135567520336,14.2534631287344,8.3528701814781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p3@Inha}} | ||
|EntrezGene=16322 | |||
|HGNC= | |||
|MCL_coexpression_id=919 | |||
|UniProt=Q04997 | |||
|association_with_transcript=113bp_to_ENSMUST00000037330,NM_010564,uc007bps.1_5end | |||
|description=CAGE_peak_3_at_Inha_5end | |||
|id=chr1:75503765..75503776,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.66e-21!18;UBERON:0005564!1.66e-21!18;UBERON:0004176!4.20e-20!17;UBERON:0009196!4.20e-20!17;UBERON:0009117!4.20e-20!17;UBERON:0003133!6.60e-17!24;UBERON:0000473!6.44e-16!14;UBERON:0005156!3.30e-15!26;UBERON:0000990!3.30e-15!26;UBERON:0003135!1.27e-14!15;UBERON:0003101!1.71e-13!16;UBERON:0000079!1.71e-13!16;UBERON:0002323!8.07e-12!37;UBERON:0004458!8.07e-12!37;UBERON:0002369!9.48e-12!7;UBERON:0006858!9.48e-12!7;UBERON:0003886!2.31e-11!38;UBERON:0002553!6.24e-11!39;UBERON:0002342!8.97e-08!10;UBERON:0005062!8.97e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.27e-35,18;UBERON:0005564,2.27e-35,18;UBERON:0000473,5.26e-33,14;UBERON:0004176,3.65e-32,17;UBERON:0009196,3.65e-32,17;UBERON:0009117,3.65e-32,17;UBERON:0003135,1.10e-30,15;UBERON:0003101,1.19e-28,16;UBERON:0000079,1.19e-28,16;UBERON:0003133,5.83e-26,24;UBERON:0005156,8.69e-24,26;UBERON:0000990,8.69e-24,26;UBERON:0002369,8.06e-20,7;UBERON:0006858,8.06e-20,7;UBERON:0002323,5.04e-16,37;UBERON:0004458,5.04e-16,37;UBERON:0003886,1.53e-15,38;UBERON:0002553,4.41e-15,39;UBERON:0000926,4.05e-11,120;UBERON:0004120,4.05e-11,120;UBERON:0006603,4.05e-11,120;UBERON:0003064,1.17e-09,14 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,10.235634279202,16.4411358288556,29.9800146432876,23.2112866451039,10.8181610564848,1.75933227861546,0.247194967734374,0,0,0.161766849947409,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,1.14248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,24.2717545706139,0.890328018336276,0.977321756121456,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,7.17679421011098,16.2149320647956,25.8620080497583,34.7439925155097,33.1154005961925,30.982311002479,19.2702489569046,19.7135567520336,14.2534631287344,8.3528701814781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Inha | |||
}} |
Revision as of 21:00, 13 September 2013
Short description: | p3@Inha |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Inha_5end |
Coexpression cluster: | MCL_coexpression_mm9:919 |
Association with transcript: | 113bp_to_ENSMUST00000037330, NM_010564, uc007bps.1_5end |
EntrezGene: | Inha |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 2.27e-35 | 18 |
gonad primordium | 2.27e-35 | 18 |
testis | 5.26e-33 | 14 |
external genitalia | 3.65e-32 | 17 |
indifferent external genitalia | 3.65e-32 | 17 |
indifferent gonad | 3.65e-32 | 17 |
male reproductive organ | 1.10e-30 | 15 |
male organism | 1.19e-28 | 16 |
male reproductive system | 1.19e-28 | 16 |
reproductive organ | 5.83e-26 | 24 |
reproductive structure | 8.69e-24 | 26 |
reproductive system | 8.69e-24 | 26 |
adrenal gland | 8.06e-20 | 7 |
adrenal/interrenal gland | 8.06e-20 | 7 |
body cavity | 5.04e-16 | 37 |
body cavity or lining | 5.04e-16 | 37 |
body cavity precursor | 1.53e-15 | 38 |
anatomical cavity | 4.41e-15 | 39 |
mesoderm | 4.05e-11 | 120 |
mesoderm-derived structure | 4.05e-11 | 120 |
presumptive mesoderm | 4.05e-11 | 120 |
intermediate mesoderm | 1.17e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.