FFCP PHASE1:Mm9::chr1:88998811..88998827,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:88998811..88998827,-|id=chr1:88998811..88998827,-|ontology_enrichment_celltype=CL:0000239!2.51e-10!6;CL:0000677!2.51e-10!6;CL:0000212!2.51e-10!6;CL:0000584!2.51e-10!6;CL:0002563!2.80e-09!9;CL:0002251!2.80e-09!9;CL:0000075!8.43e-09!7|ontology_enrichment_celltype_v019_2=CL:0000239,9.52e-09,6;CL:0000677,9.52e-09,6;CL:0000584,9.52e-09,6;CL:0000075,1.44e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.34e-22!43;UBERON:0005409!6.19e-18!59;UBERON:0000344!2.53e-12!15;UBERON:0003350!2.80e-09!9;UBERON:0004808!2.80e-09!9;UBERON:0001277!2.80e-09!9;UBERON:0001242!1.37e-08!13;UBERON:0000060!1.37e-08!13;UBERON:0001262!1.37e-08!13;UBERON:0004786!1.37e-08!13;UBERON:0000485!1.81e-07!11;UBERON:0004923!4.51e-07!24;UBERON:0001007!4.97e-07!128;UBERON:0001555!4.97e-07!128;UBERON:0007026!4.97e-07!128;UBERON:0004119!7.76e-07!130;UBERON:0000925!7.76e-07!130;UBERON:0006595!7.76e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.41e-33,31;UBERON:0005409,1.95e-21,47;UBERON:0000344,5.03e-13,15;UBERON:0001962,4.37e-12,2;UBERON:0001961,4.37e-12,2;UBERON:0001744,4.37e-12,2;UBERON:0001007,1.98e-10,116;UBERON:0001555,1.98e-10,116;UBERON:0007026,1.98e-10,116;UBERON:0004119,3.22e-10,118;UBERON:0000925,3.22e-10,118;UBERON:0006595,3.22e-10,118;UBERON:0002465,2.37e-08,3;UBERON:0004923,5.38e-08,24;UBERON:0004921,9.29e-08,114;UBERON:0001242,4.36e-07,13;UBERON:0001262,4.36e-07,13;UBERON:0004786,4.36e-07,13;UBERON:0003199,7.89e-07,1|phase1_expression=0,0.348975407639361,1.36499771816861,4.23449895829562,2.00358291978539,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,3.44113921600755,0.57423196411502,0,0.861884930743556,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.2830206140143,1.05780226665418,0,0,0,0,0.22237804384487,0.570676878337677,5.21981967698963,1.81168850196412,1.75934646160189,2.78539060857611,1.16978452271472,9.88701349519644,0.216138049874694,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.944050424693745,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0|short_description=p@chr1:88998811..88998827,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:88998811..88998827,- | |||
|id=chr1:88998811..88998827,- | |||
|ontology_enrichment_celltype=CL:0000239!2.51e-10!6;CL:0000677!2.51e-10!6;CL:0000212!2.51e-10!6;CL:0000584!2.51e-10!6;CL:0002563!2.80e-09!9;CL:0002251!2.80e-09!9;CL:0000075!8.43e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.52e-09,6;CL:0000677,9.52e-09,6;CL:0000584,9.52e-09,6;CL:0000075,1.44e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.34e-22!43;UBERON:0005409!6.19e-18!59;UBERON:0000344!2.53e-12!15;UBERON:0003350!2.80e-09!9;UBERON:0004808!2.80e-09!9;UBERON:0001277!2.80e-09!9;UBERON:0001242!1.37e-08!13;UBERON:0000060!1.37e-08!13;UBERON:0001262!1.37e-08!13;UBERON:0004786!1.37e-08!13;UBERON:0000485!1.81e-07!11;UBERON:0004923!4.51e-07!24;UBERON:0001007!4.97e-07!128;UBERON:0001555!4.97e-07!128;UBERON:0007026!4.97e-07!128;UBERON:0004119!7.76e-07!130;UBERON:0000925!7.76e-07!130;UBERON:0006595!7.76e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.41e-33,31;UBERON:0005409,1.95e-21,47;UBERON:0000344,5.03e-13,15;UBERON:0001962,4.37e-12,2;UBERON:0001961,4.37e-12,2;UBERON:0001744,4.37e-12,2;UBERON:0001007,1.98e-10,116;UBERON:0001555,1.98e-10,116;UBERON:0007026,1.98e-10,116;UBERON:0004119,3.22e-10,118;UBERON:0000925,3.22e-10,118;UBERON:0006595,3.22e-10,118;UBERON:0002465,2.37e-08,3;UBERON:0004923,5.38e-08,24;UBERON:0004921,9.29e-08,114;UBERON:0001242,4.36e-07,13;UBERON:0001262,4.36e-07,13;UBERON:0004786,4.36e-07,13;UBERON:0003199,7.89e-07,1 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,4.23449895829562,2.00358291978539,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,3.44113921600755,0.57423196411502,0,0.861884930743556,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,6.89734049063197,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.2830206140143,1.05780226665418,0,0,0,0,0.22237804384487,0.570676878337677,5.21981967698963,1.81168850196412,1.75934646160189,2.78539060857611,1.16978452271472,9.88701349519644,0.216138049874694,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.944050424693745,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0 | |||
|short_description=p@chr1:88998811..88998827,- | |||
}} |
Revision as of 21:09, 13 September 2013
Short description: | p@chr1:88998811..88998827, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88998811..88998827, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.52e-09 | 6 |
gut absorptive cell | 9.52e-09 | 6 |
enterocyte | 9.52e-09 | 6 |
columnar/cuboidal epithelial cell | 1.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.41e-33 | 31 |
gastrointestinal system | 1.95e-21 | 47 |
mucosa | 5.03e-13 | 15 |
gut-associated lymphoid tissue | 4.37e-12 | 2 |
mucosa-associated lymphoid tissue | 4.37e-12 | 2 |
lymphoid tissue | 4.37e-12 | 2 |
digestive system | 1.98e-10 | 116 |
digestive tract | 1.98e-10 | 116 |
primitive gut | 1.98e-10 | 116 |
endoderm-derived structure | 3.22e-10 | 118 |
endoderm | 3.22e-10 | 118 |
presumptive endoderm | 3.22e-10 | 118 |
lymphoid system | 2.37e-08 | 3 |
organ component layer | 5.38e-08 | 24 |
subdivision of digestive tract | 9.29e-08 | 114 |
intestinal mucosa | 4.36e-07 | 13 |
wall of intestine | 4.36e-07 | 13 |
gastrointestinal system mucosa | 4.36e-07 | 13 |
egg chamber | 7.89e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.