FFCP PHASE1:Hg19::chr6:86114516..86114537,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86114516..86114537,-|id=chr6:86114516..86114537,-|ontology_enrichment_celltype=CL:0000066!1.03e-21!254;CL:0000220!2.67e-15!246;CL:0002321!6.32e-15!248;CL:0000548!9.70e-15!679;CL:0000004!9.70e-15!679;CL:0000255!9.70e-15!679;CL:0000012!2.19e-14!682;CL:0000076!1.13e-10!62;CL:0000003!5.52e-10!722;CL:0000223!1.83e-09!59;CL:0000063!2.52e-09!578;CL:0000144!6.15e-08!625;CL:0000222!6.27e-08!119;CL:0002371!1.28e-07!591;CL:0002076!3.33e-07!43;CL:0000055!8.08e-07!180|ontology_enrichment_celltype_v019=CL:0000244;5.12e-20;4!CL:0000731;5.12e-20;4!CL:0002368;2.58e-09;13|ontology_enrichment_celltype_v019_2=CL:0000244,2.72e-21,4;CL:0000731,2.72e-21,4;CL:0002368,3.60e-09,13;CL:0000066,2.80e-08,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.22e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!4.66e-10!82;UBERON:0000490!1.44e-09!138;UBERON:0005256!2.50e-09!143;UBERON:0003914!6.93e-09!118;UBERON:0002100!1.14e-08!216;UBERON:0000119!1.87e-08!312;UBERON:0003102!2.88e-08!95;UBERON:0000483!5.79e-08!309;UBERON:0003104!7.21e-08!238;UBERON:0009142!7.21e-08!238;UBERON:0004119!7.85e-08!169;UBERON:0000925!7.85e-08!169;UBERON:0006595!7.85e-08!169|ontology_enrichment_uberon_v019=UBERON:0000365;4.75e-16;5!UBERON:0005910;2.12e-13;6!UBERON:0006554;3.61e-07;30!UBERON:0001008;3.61e-07;30!UBERON:0000486;9.73e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.62e-17,5;UBERON:0005910,3.09e-14,6;UBERON:0005911,2.12e-07,82|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.993812036833525,1.72046919021225,0,0.56530794192401,1.67799774483962,0,0.626984899610432,0,0,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.714397826272638,0.44905874525234,0.337834441449967,0,0,0.916008719652036,0,0,0.436094052142534,0,0.12663051166458,1.19168262731897,0.573673241497627,0,0,0,0.49333509683432,0,0.67355336034844,0,0,0,0.234321431833797,0,1.1409436430889,0,0.352303495931295,0.485618833104395,0.702254033511242,0.408308342509787,0.245668634623536,0,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0.612975591598039,0,0.340296549480063,0.538168907066586,0.213557388818567,0,0.900273288253207,0.412210116953756,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.329250856225877,0,1.20634766893957,0.648119116109707,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,1.6798212819886,0.425325291727159,0.268675568108545,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.95339771567235,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,1.03850885836724,0.232420756919918,0.120859449591622,1.20303882181971,0.0920809889358963,0.229628896329213,0.364182336013434,0,0.451199612907412,0.15403067420883,0,0,1.05551628892876,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0.165018999841176,0,1.30012049207304,0,0.096670718292122,0,0,0.551346289938122,0,0.290033387828457,0.0852266274161009,0,1.15699440752685,1.15314040419064,1.27612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.392996164052485,0,0.709522128141196,0,0,0,0,0.192444225451024,1.34060455107157,0,0,1.72202149068492,1.68471475667626,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,1.22864280839693,0,0,1.00177834520615,0,0,0,0,0,0.102268682502155,0,0.311039587661807,1.07842021376792,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0.910347586283997,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0,0,1.323967823502,1.56966459203613,0,0,0.277349346026277,0.520679215005393,0.0979923974143777,0.34823682632161,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,4.38534158869603,1.9871461170299,0,0,0.561111741760736,0.213452994739353,0,0,0,0,0.432164393964449,0.49701014226173,0,0.67952103036807,1.04602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0.551482276150566,0.164831716762333,0.337017719270924,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0.179287339332845,1.15149118391667,0,0,0,0,0,0.653174720218818,2.39460383124975,0,0.681552087141687,0.339936274560377,0,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.926089897295336,0.489473409012935,0.179088841081487,0.617602894321944,0,1.23682402162117,0.578742114812744,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.462102664601353,0.381382095467167,1.3807198521202,0,0,0.60511520611056,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.827356886187777,0.111231401892069,0.078493092850514,0,0,0,1.07963795609311,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,1.06498800657509,0.852134047591577,0,0,0.31020638566432,0.955538938977433,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.449126010532934,0,0,0,0,0,0|short_description=p@chr6:86114516..86114537,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:86114516..86114537,- | |||
|id=chr6:86114516..86114537,- | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-21!254;CL:0000220!2.67e-15!246;CL:0002321!6.32e-15!248;CL:0000548!9.70e-15!679;CL:0000004!9.70e-15!679;CL:0000255!9.70e-15!679;CL:0000012!2.19e-14!682;CL:0000076!1.13e-10!62;CL:0000003!5.52e-10!722;CL:0000223!1.83e-09!59;CL:0000063!2.52e-09!578;CL:0000144!6.15e-08!625;CL:0000222!6.27e-08!119;CL:0002371!1.28e-07!591;CL:0002076!3.33e-07!43;CL:0000055!8.08e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000244;5.12e-20;4!CL:0000731;5.12e-20;4!CL:0002368;2.58e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.72e-21,4;CL:0000731,2.72e-21,4;CL:0002368,3.60e-09,13;CL:0000066,2.80e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.22e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!4.66e-10!82;UBERON:0000490!1.44e-09!138;UBERON:0005256!2.50e-09!143;UBERON:0003914!6.93e-09!118;UBERON:0002100!1.14e-08!216;UBERON:0000119!1.87e-08!312;UBERON:0003102!2.88e-08!95;UBERON:0000483!5.79e-08!309;UBERON:0003104!7.21e-08!238;UBERON:0009142!7.21e-08!238;UBERON:0004119!7.85e-08!169;UBERON:0000925!7.85e-08!169;UBERON:0006595!7.85e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.75e-16;5!UBERON:0005910;2.12e-13;6!UBERON:0006554;3.61e-07;30!UBERON:0001008;3.61e-07;30!UBERON:0000486;9.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.62e-17,5;UBERON:0005910,3.09e-14,6;UBERON:0005911,2.12e-07,82 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.993812036833525,1.72046919021225,0,0.56530794192401,1.67799774483962,0,0.626984899610432,0,0,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.714397826272638,0.44905874525234,0.337834441449967,0,0,0.916008719652036,0,0,0.436094052142534,0,0.12663051166458,1.19168262731897,0.573673241497627,0,0,0,0.49333509683432,0,0.67355336034844,0,0,0,0.234321431833797,0,1.1409436430889,0,0.352303495931295,0.485618833104395,0.702254033511242,0.408308342509787,0.245668634623536,0,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0.612975591598039,0,0.340296549480063,0.538168907066586,0.213557388818567,0,0.900273288253207,0.412210116953756,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.329250856225877,0,1.20634766893957,0.648119116109707,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,1.6798212819886,0.425325291727159,0.268675568108545,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.95339771567235,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,1.03850885836724,0.232420756919918,0.120859449591622,1.20303882181971,0.0920809889358963,0.229628896329213,0.364182336013434,0,0.451199612907412,0.15403067420883,0,0,1.05551628892876,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0.165018999841176,0,1.30012049207304,0,0.096670718292122,0,0,0.551346289938122,0,0.290033387828457,0.0852266274161009,0,1.15699440752685,1.15314040419064,1.27612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.392996164052485,0,0.709522128141196,0,0,0,0,0.192444225451024,1.34060455107157,0,0,1.72202149068492,1.68471475667626,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,1.22864280839693,0,0,1.00177834520615,0,0,0,0,0,0.102268682502155,0,0.311039587661807,1.07842021376792,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0.910347586283997,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0,0,1.323967823502,1.56966459203613,0,0,0.277349346026277,0.520679215005393,0.0979923974143777,0.34823682632161,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,4.38534158869603,1.9871461170299,0,0,0.561111741760736,0.213452994739353,0,0,0,0,0.432164393964449,0.49701014226173,0,0.67952103036807,1.04602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0.551482276150566,0.164831716762333,0.337017719270924,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0.179287339332845,1.15149118391667,0,0,0,0,0,0.653174720218818,2.39460383124975,0,0.681552087141687,0.339936274560377,0,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.926089897295336,0.489473409012935,0.179088841081487,0.617602894321944,0,1.23682402162117,0.578742114812744,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.462102664601353,0.381382095467167,1.3807198521202,0,0,0.60511520611056,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.827356886187777,0.111231401892069,0.078493092850514,0,0,0,1.07963795609311,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,1.06498800657509,0.852134047591577,0,0,0.31020638566432,0.955538938977433,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr6:86114516..86114537,- | |||
}} |
Revision as of 22:01, 13 September 2013
Short description: | p@chr6:86114516..86114537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86114516..86114537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.72e-21 | 4 |
urothelial cell | 2.72e-21 | 4 |
respiratory epithelial cell | 3.60e-09 | 13 |
epithelial cell | 2.80e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.62e-17 | 5 |
transitional epithelium | 3.09e-14 | 6 |
endo-epithelium | 2.12e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.