FFCP PHASE1:Hg19::chr7:112063175..112063191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3475|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5456|TSSclassifier=S|UniProt=O00458,A4D0U1,B7Z5G1|association_with_transcript=-7bp_to_ENST00000005558,NM_001007245,NM_001197080_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_IFRD1_5end|id=chr7:112063175..112063191,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;1.02e-07;3!CL:0000094;4.61e-07;8|ontology_enrichment_celltype_v019_2=CL:0000775,1.02e-07,3;CL:0000094,4.64e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!1.60e-07!51;DOID:0060083!1.60e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-08,51;DOID:0060083,1.60e-08,51;DOID:162,8.98e-07,235|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-13;15!UBERON:0000179;9.47e-13;15!UBERON:0000463;9.47e-13;15!UBERON:0002390;4.72e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.41e-13,15;UBERON:0000179,9.41e-13,15;UBERON:0000463,9.41e-13,15;UBERON:0002390,9.67e-07,98;UBERON:0003061,9.67e-07,98|phase1_expression=0.908391896352783,0.856402095563933,1.12763523276777,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0,1.34465029290355,2.41077811209591,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0.767658796194425,0,0,0,0,0.309868802321207,3.55423081218554,0,0,0,0,0.223915474239924,0.32389366601898,0,0.436194716338694,0.755751887377619,0,0.232429036905685,0.822335776043652,1.23882548358041,1.1507695692886,0.512321413058201,0.709446689665756,1.37898272294647,0,0,0.941211697713023,1.36453075028923,0.674170453335254,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0.580418477257168,1.13477044938228,0.622822248995575,1.50749199154046,0.521482918420201,0.217188844705117,0,1.47311054395026,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,0.12786256184353,0,0,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.527008714158756,0.327447688744282,0,0,1.9472843619281,0.696518949197069,1.06366368415092,0,0,0,0.596287222100115,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0.402829317109147,1.52054421143703,0.24406205754817,0,0,0.446498641420399,0,0.112611480483322,0,0,0,10.5424333948851,15.511210565933,0,0,0.379891534993739,0.662045904066094,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0.280901613404497,0.816616685019573,0.245668634623536,0.516628905878827,3.56400857184616,0.989067717114227,0,0,0.841680569770331,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0.358779271377724,0,0.635795703478686,0.600182192168805,0.618315175430633,0.515281080091258,0.558350568994769,0.337552664482532,0.194874010322397,0,0.644349290496095,0.646584227275248,1.06502877754984,0.503760491138201,0.339121184620975,0,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,1.00928340350251,0.72995471815166,1.56449532329816,0,0,1.85747171212792,0,0.118306800039844,0.168584690078102,0,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.579652024875384,1.6437217193015,0.433099343283221,0.925971025153221,0.190254152234598,1.58040879591855,0,0.246217006087397,0.468008530278475,0.891786973732369,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.36669142910475,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0.65147236858747,0.710783897485092,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.718874566474748,0,0,0.723906533337896,0.205476322550383,0,2.57795831185113,0,0,0,0.254094624222463,0,0,0,0,14.2311334549965,11.966458368161,22.7928532389819,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,1.24900292158013,0.788512075169673,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.521301686808497,0,0,1.44737618286021,0.431428401637234,0.426910231213777,0,0,0,0.248107807818777,0.920771839728375,0,1.53766979106841,1.53512174720011,0.804269605718038,0,0.154209693802656,0.177561725313127,0.328508624055237,0.519254429183621,0,0.362578348774867,0.200506470303285,0,0.114814448164607,0.364182336013434,0.393373244878272,0.902399225814824,0.539107359730903,0.784349769176855,0,0.422206515571503,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5456 | |||
|TSSclassifier=S | |||
|UniProt=O00458,A4D0U1,B7Z5G1 | |||
|association_with_transcript=-7bp_to_ENST00000005558,NM_001007245,NM_001197080_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_IFRD1_5end | |||
|id=chr7:112063175..112063191,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.02e-07;3!CL:0000094;4.61e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.02e-07,3;CL:0000094,4.64e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.60e-07!51;DOID:0060083!1.60e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-08,51;DOID:0060083,1.60e-08,51;DOID:162,8.98e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-13;15!UBERON:0000179;9.47e-13;15!UBERON:0000463;9.47e-13;15!UBERON:0002390;4.72e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.41e-13,15;UBERON:0000179,9.41e-13,15;UBERON:0000463,9.41e-13,15;UBERON:0002390,9.67e-07,98;UBERON:0003061,9.67e-07,98 | |||
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| |||
|short_description=p3@IFRD1 | |||
}} |
Revision as of 22:46, 13 September 2013
Short description: | p3@IFRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IFRD1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -7bp_to_ENST00000005558, NM_001007245, NM_001197080_5end |
EntrezGene: | IFRD1 |
HGNC: | 5456 |
UniProt: | O00458A4D0U1B7Z5G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.02e-07 | 3 |
granulocyte | 4.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 9.41e-13 | 15 |
haemolymphatic fluid | 9.41e-13 | 15 |
organism substance | 9.41e-13 | 15 |
hematopoietic system | 9.67e-07 | 98 |
blood island | 9.67e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.60e-08 | 51 |
immune system cancer | 1.60e-08 | 51 |
cancer | 8.98e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.