FFCP PHASE1:Mm9::chr2:24790668..24790735,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=215705|HGNC=|MCL_coexpression_id=380|UniProt=Q99KN1,A2AIS9,D6RDR8|association_with_transcript=0bp_to_ENSMUST00000102935,ENSMUST00000133396,ENSMUST00000133934,ENSMUST00000144963_5end|description=CAGE_peak_1_at_Arrdc1_5end|id=chr2:24790668..24790735,-|ontology_enrichment_celltype=CL:0000063!6.02e-08!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.85e-14!59;UBERON:0001007!1.24e-13!128;UBERON:0001555!1.24e-13!128;UBERON:0007026!1.24e-13!128;UBERON:0004119!3.35e-13!130;UBERON:0000925!3.35e-13!130;UBERON:0006595!3.35e-13!130;UBERON:0004921!1.19e-12!126;UBERON:0004185!1.19e-12!126;UBERON:0000160!2.24e-11!43;UBERON:0000344!9.24e-10!15;UBERON:0001242!1.40e-08!13;UBERON:0000060!1.40e-08!13;UBERON:0001262!1.40e-08!13;UBERON:0004786!1.40e-08!13;UBERON:0004923!1.41e-08!24;UBERON:0002193!6.34e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.26e-14,47;UBERON:0001007,1.73e-12,116;UBERON:0001555,1.73e-12,116;UBERON:0007026,1.73e-12,116;UBERON:0004119,4.72e-12,118;UBERON:0000925,4.72e-12,118;UBERON:0006595,4.72e-12,118;UBERON:0000160,1.20e-11,31;UBERON:0004921,1.54e-11,114;UBERON:0000344,9.24e-10,15;UBERON:0001242,1.40e-08,13;UBERON:0001262,1.40e-08,13;UBERON:0004786,1.40e-08,13;UBERON:0004923,1.41e-08,24;UBERON:0002193,6.34e-07,48;UBERON:0002405,6.34e-07,48|phase1_expression=12.9720566154883,50.9504095153467,73.2548775417153,60.7953064726728,65.1164448930251,55.5680390028355,55.5998084617351,48.8086162609158,15.20518199238,14.5120006319636,7.87602653837323,9.6524312384357,44.3409890521823,51.4906170247895,19.3203661853084,18.8301998672538,16.7894850750755,52.5244505321466,42.7797032849905,39.0438479654188,15.3077922271926,31.3759405794798,31.0827749075333,52.9574919446176,57.3523202667925,59.1458923038471,74.952587331679,58.8236465232477,60.997517645496,46.6255740055872,49.445903876133,2.54012269383853,6.1506478758457,0,42.1723364836861,37.2365605603023,42.8755648150975,84.5433894088554,46.880120671428,52.3523743973798,75.2936304679698,78.5502307702212,70.8845115425484,8.43508680436368,10.644577778049,6.79122982998222,21.1245662973971,4.14247797122848,5.05278220289285,5.8328969722285,8.25919887589639,5.75010257459886,45.4690862416466,42.071004236658,41.3395372945231,13.3774906738692,9.45560351797897,12.3761302146586,5.66486090406874,7.93486468908049,12.6766280701236,10.8430250262122,14.2287167377782,61.6431306337758,71.1983781048222,75.3108921842866,26.3648097256196,16.5213871288268,6.32506635081714,5.53524347159932,4.83747411108179,13.4255962669788,11.7060326704355,4.04219637409348,3.45043695665651,12.8690630125403,5.50579404996943,5.2351808614927,3.37934373163736,7.51751840062105,8.5083508550241,10.4182674111352,4.18774498502071,2.8138130501584,5.34793867218835,10.0173719061047,8.82704420954438,10.4383689662168,3.40767869999328,8.61515785217355,33.9141451780963,6.88339101585109,1.3599426674155,3.2382191498269,2.59910566979068,1.34408066129201,11.7973312910672,7.49893419343454,10.3914401841148,9.54016851177919,28.5912142146661,8.98285341900225,5.09610479413291,14.2213340630666,39.6178605050522,41.044298206966,44.9916756063157,13.9304333257253,29.0010429684832,9.50029690014878,5.89850111004862,7.00270600117925,8.07154240396205,6.93324146542064,10.2302175208063,6.03199638382442,25.9554716121093,5.06097749219691,32.7305904221453,9.70601099684455,10.8212344045593,11.1521308221101,46.5979403045305,5.27005434620785,6.91174132484402,31.1657607354481,22.7648736561249,27.5955256256968,19.0605340609597,5.09288173976397,2.28750301409313,7.91622418311046,4.17178368461463,4.60287823194595,3.1168206683934,5.51620294430376,13.4427960282417,19.9051152976149,24.0086620511991,6.94458124425364,5.33493816147085,7.12696523743766,3.96136685571768,7.38453607395004,9.32100038373192,6.79002717509704,8.62055865949505,6.72628763921441,4.095791865724,4.72765200419548,5.80638709741031,8.32943783224784,8.61946472599353,8.70630416305416,13.9931852757402,6.17006227137329,21.7686088067103,17.4996576838006,22.4489164522518,4.76389276831654,4.92504725960302,4.32148947506436,4.7348947117042,6.29645541591692,5.24508183817086,4.41814495025775,4.02410102099429,5.48797109125697,3.29119699826961,9.68588038066662,5.83695428730161,6.57899943413995,6.80605357402257,7.91817870686193,2.94405927989778,5.9684675179985,46.2586296177317,19.8337924997658,4.47905326123991,8.59275685883622,19.4589866596361,25.4121241025412,30.0210359190575,28.5338439168839,33.2170343081158,26.3518327558417,33.6789179792361,36.2100779114894,33.5338229844887,38.6492345721315,36.743468478698,39.031689557856,7.96605184002943,8.56863844572966,11.270773567308,11.6081256871829,11.0552917685547,15.5000161957604,20.9945303252534,23.6176236767363,20.095837163696,24.5560356204383,4.15033677922008,5.5058884886311,9.23827277032054,8.54476027062444,8.52012509831712,11.576503668116,10.9489116266011,10.9324532231308,10.0523840600522,9.33508804839477,10.0637744569148,13.769215063734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| ||
|EntrezGene=215705 | |||
|HGNC= | |||
|MCL_coexpression_id=380 | |||
|UniProt=Q99KN1,A2AIS9,D6RDR8 | |||
|association_with_transcript=0bp_to_ENSMUST00000102935,ENSMUST00000133396,ENSMUST00000133934,ENSMUST00000144963_5end | |||
|description=CAGE_peak_1_at_Arrdc1_5end | |||
|id=chr2:24790668..24790735,- | |||
|ontology_enrichment_celltype=CL:0000063!6.02e-08!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.85e-14!59;UBERON:0001007!1.24e-13!128;UBERON:0001555!1.24e-13!128;UBERON:0007026!1.24e-13!128;UBERON:0004119!3.35e-13!130;UBERON:0000925!3.35e-13!130;UBERON:0006595!3.35e-13!130;UBERON:0004921!1.19e-12!126;UBERON:0004185!1.19e-12!126;UBERON:0000160!2.24e-11!43;UBERON:0000344!9.24e-10!15;UBERON:0001242!1.40e-08!13;UBERON:0000060!1.40e-08!13;UBERON:0001262!1.40e-08!13;UBERON:0004786!1.40e-08!13;UBERON:0004923!1.41e-08!24;UBERON:0002193!6.34e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.26e-14,47;UBERON:0001007,1.73e-12,116;UBERON:0001555,1.73e-12,116;UBERON:0007026,1.73e-12,116;UBERON:0004119,4.72e-12,118;UBERON:0000925,4.72e-12,118;UBERON:0006595,4.72e-12,118;UBERON:0000160,1.20e-11,31;UBERON:0004921,1.54e-11,114;UBERON:0000344,9.24e-10,15;UBERON:0001242,1.40e-08,13;UBERON:0001262,1.40e-08,13;UBERON:0004786,1.40e-08,13;UBERON:0004923,1.41e-08,24;UBERON:0002193,6.34e-07,48;UBERON:0002405,6.34e-07,48 | |||
|phase1_expression=12.9720566154883,50.9504095153467,73.2548775417153,60.7953064726728,65.1164448930251,55.5680390028355,55.5998084617351,48.8086162609158,15.20518199238,14.5120006319636,7.87602653837323,9.6524312384357,44.3409890521823,51.4906170247895,19.3203661853084,18.8301998672538,16.7894850750755,52.5244505321466,42.7797032849905,39.0438479654188,15.3077922271926,31.3759405794798,31.0827749075333,52.9574919446176,57.3523202667925,59.1458923038471,74.952587331679,58.8236465232477,60.997517645496,46.6255740055872,49.445903876133,2.54012269383853,6.1506478758457,0,42.1723364836861,37.2365605603023,42.8755648150975,84.5433894088554,46.880120671428,52.3523743973798,75.2936304679698,78.5502307702212,70.8845115425484,8.43508680436368,10.644577778049,6.79122982998222,21.1245662973971,4.14247797122848,5.05278220289285,5.8328969722285,8.25919887589639,5.75010257459886,45.4690862416466,42.071004236658,41.3395372945231,13.3774906738692,9.45560351797897,12.3761302146586,5.66486090406874,7.93486468908049,12.6766280701236,10.8430250262122,14.2287167377782,61.6431306337758,71.1983781048222,75.3108921842866,26.3648097256196,16.5213871288268,6.32506635081714,5.53524347159932,4.83747411108179,13.4255962669788,11.7060326704355,4.04219637409348,3.45043695665651,12.8690630125403,5.50579404996943,5.2351808614927,3.37934373163736,7.51751840062105,8.5083508550241,10.4182674111352,4.18774498502071,2.8138130501584,5.34793867218835,10.0173719061047,8.82704420954438,10.4383689662168,3.40767869999328,8.61515785217355,33.9141451780963,6.88339101585109,1.3599426674155,3.2382191498269,2.59910566979068,1.34408066129201,11.7973312910672,7.49893419343454,10.3914401841148,9.54016851177919,28.5912142146661,8.98285341900225,5.09610479413291,14.2213340630666,39.6178605050522,41.044298206966,44.9916756063157,13.9304333257253,29.0010429684832,9.50029690014878,5.89850111004862,7.00270600117925,8.07154240396205,6.93324146542064,10.2302175208063,6.03199638382442,25.9554716121093,5.06097749219691,32.7305904221453,9.70601099684455,10.8212344045593,11.1521308221101,46.5979403045305,5.27005434620785,6.91174132484402,31.1657607354481,22.7648736561249,27.5955256256968,19.0605340609597,5.09288173976397,2.28750301409313,7.91622418311046,4.17178368461463,4.60287823194595,3.1168206683934,5.51620294430376,13.4427960282417,19.9051152976149,24.0086620511991,6.94458124425364,5.33493816147085,7.12696523743766,3.96136685571768,7.38453607395004,9.32100038373192,6.79002717509704,8.62055865949505,6.72628763921441,4.095791865724,4.72765200419548,5.80638709741031,8.32943783224784,8.61946472599353,8.70630416305416,13.9931852757402,6.17006227137329,21.7686088067103,17.4996576838006,22.4489164522518,4.76389276831654,4.92504725960302,4.32148947506436,4.7348947117042,6.29645541591692,5.24508183817086,4.41814495025775,4.02410102099429,5.48797109125697,3.29119699826961,9.68588038066662,5.83695428730161,6.57899943413995,6.80605357402257,7.91817870686193,2.94405927989778,5.9684675179985,46.2586296177317,19.8337924997658,4.47905326123991,8.59275685883622,19.4589866596361,25.4121241025412,30.0210359190575,28.5338439168839,33.2170343081158,26.3518327558417,33.6789179792361,36.2100779114894,33.5338229844887,38.6492345721315,36.743468478698,39.031689557856,7.96605184002943,8.56863844572966,11.270773567308,11.6081256871829,11.0552917685547,15.5000161957604,20.9945303252534,23.6176236767363,20.095837163696,24.5560356204383,4.15033677922008,5.5058884886311,9.23827277032054,8.54476027062444,8.52012509831712,11.576503668116,10.9489116266011,10.9324532231308,10.0523840600522,9.33508804839477,10.0637744569148,13.7692150637346,8.11297950097858,2.02063102357689,3.58794827043824,2.8946611281802,38.4286635546538,7.57965647081939,14.3409179268983,15.9560380628677,23.9384053254272,32.9987327160377,41.6576371550524,45.4661399508671,27.9014205067958,29.6762684129358,31.412589425525,33.9197061461578,33.155516518252,38.1873514655191,25.6345182696763,50.58322859514,18.1952781017043,29.2492951083016,4.65596710964597,5.04010252346474,1.3114795630134,5.80683132570058,6.94118082715765,8.98009111882268,6.24727853425117,8.84184552424442,8.68914828921337,8.20921939287614,6.47697122679831,10.2289550268959,9.88219444866309,5.46246237917072,19.8716119291576,14.4233138970477,12.0536349921646,25.0754586918254,14.6019652173959,15.2951800777638,22.0696196584268,12.0707251043775,20.0805287158925,17.8312385807478,26.3596859031586,17.4496190149203,16.7553767840819,13.2735438333043,12.6502330289999,10.3135543248187,17.3624198934432,11.8840322060665,20.1799546701097,10.9311887866112,10.1083933176096,9.81028496811388,9.54384319492302,9.43841342255258,9.62154003061212,8.89694697628045,46.9725487857069,18.4672603294458,17.5996225098537,10.3135101627147,13.7278195603607,14.9368218768006,33.228815375803,3.8939313422207,23.9219233116994,14.0343070214991,13.8895895527284,17.8950034154456,18.5904149700594,23.1065954938588,24.1369370591275,25.0513099659348,26.1197950490361,69.6909551151033,8.54107182669065,20.9419051140654,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| |||
|short_description=p1@Arrdc1 | |||
}} |
Revision as of 23:23, 13 September 2013
Short description: | p1@Arrdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arrdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:380 |
Association with transcript: | 0bp_to_ENSMUST00000102935, ENSMUST00000133396, ENSMUST00000133934, ENSMUST00000144963_5end |
EntrezGene: | Arrdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.26e-14 | 47 |
digestive system | 1.73e-12 | 116 |
digestive tract | 1.73e-12 | 116 |
primitive gut | 1.73e-12 | 116 |
endoderm-derived structure | 4.72e-12 | 118 |
endoderm | 4.72e-12 | 118 |
presumptive endoderm | 4.72e-12 | 118 |
intestine | 1.20e-11 | 31 |
subdivision of digestive tract | 1.54e-11 | 114 |
mucosa | 9.24e-10 | 15 |
intestinal mucosa | 1.40e-08 | 13 |
wall of intestine | 1.40e-08 | 13 |
gastrointestinal system mucosa | 1.40e-08 | 13 |
organ component layer | 1.41e-08 | 24 |
hemolymphoid system | 6.34e-07 | 48 |
immune system | 6.34e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.