FFCP PHASE1:Mm9::chr2:27102730..27102774,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192166|HGNC=|MCL_coexpression_id=8|UniProt=Q99LB7|association_with_transcript=11bp_to_ENSMUST00000102886_5end|description=CAGE_peak_2_at_Sardh_5end|id=chr2:27102730..27102774,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!6.70e-16!98;UBERON:0005177!2.73e-15!85;UBERON:0000466!2.18e-14!79;UBERON:0009569!5.85e-14!66;UBERON:0005172!6.00e-13!49;UBERON:0005173!6.00e-13!49;UBERON:0002417!6.00e-13!49;UBERON:0000916!6.00e-13!49;UBERON:0003914!6.59e-13!47;UBERON:0002107!1.41e-12!22;UBERON:0007499!1.41e-12!22;UBERON:0006925!1.41e-12!22;UBERON:0009497!1.41e-12!22;UBERON:0000015!1.41e-12!22;UBERON:0002423!1.41e-12!22;UBERON:0006235!1.41e-12!22;UBERON:0008835!1.41e-12!22;UBERON:0003894!1.41e-12!22;UBERON:0004161!1.41e-12!22;UBERON:0008836!1.41e-12!22;UBERON:0005256!7.64e-12!47;UBERON:0002365!1.39e-11!25;UBERON:0002330!1.39e-11!25;UBERON:0009854!3.44e-11!23;UBERON:0009856!3.44e-11!23;UBERON:0003104!3.14e-08!131;UBERON:0009142!3.14e-08!131;UBERON:0000025!5.96e-08!114;UBERON:0004111!1.23e-07!122;UBERON:0000926!1.30e-07!193;UBERON:0004120!1.30e-07!193;UBERON:0006603!1.30e-07!193;UBERON:0001048!7.18e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.10e-15,90;UBERON:0005177,1.28e-15,79;UBERON:0009569,4.88e-14,66;UBERON:0003104,5.15e-14,61;UBERON:0009142,5.15e-14,61;UBERON:0003914,4.07e-13,47;UBERON:0002107,8.83e-13,22;UBERON:0007499,8.83e-13,22;UBERON:0006925,8.83e-13,22;UBERON:0009497,8.83e-13,22;UBERON:0000015,8.83e-13,22;UBERON:0002423,8.83e-13,22;UBERON:0006235,8.83e-13,22;UBERON:0008835,8.83e-13,22;UBERON:0003894,8.83e-13,22;UBERON:0004161,8.83e-13,22;UBERON:0008836,8.83e-13,22;UBERON:0005172,1.16e-12,49;UBERON:0005173,1.16e-12,49;UBERON:0002417,1.16e-12,49;UBERON:0000916,1.16e-12,49;UBERON:0002365,9.05e-12,25;UBERON:0002330,9.05e-12,25;UBERON:0005256,1.13e-11,45;UBERON:0009854,1.63e-11,23;UBERON:0009856,1.63e-11,23;UBERON:0000025,2.67e-07,114;UBERON:0004111,4.54e-07,122|phase1_expression=7.8472935081349,0.348975407639361,0.909998478779072,0.30246421130683,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,3.57181818634493,0.0992909512008853,0,0.159992422793407,0,0,0.86152399231815,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,6.2853697356099,8.62669735159903,20.342174953049,6.75877984779384,11.8630538676615,3.4997381833371,7.97922603264566,11.5002051491977,0,0,0,8.48956138918625,15.1862723167541,11.3447860301037,0.404632921719196,1.05798195854407,1.90149421051854,13.2149367506962,8.89294796111139,3.5995988691256,1.97773272513395,1.4209602298922,12.583204641773,14.6002956022191,0.311068836925433,0.135005938331691,0.630974884054146,7.42692559449889,6.18431914664518,0.61245399607477,0.383381884072945,0,0,2.42605942361857,2.15049146558741,1.05509030184155,0.365950574409639,0.52091337055676,1.11673199600552,1.68828783009504,1.5279824777681,2.35702868378934,2.84743361598206,2.05039390407831,0.908714319998209,2.11600368298999,2.31891590961342,20.6501730475533,20.3991400112325,35.6204106480959,37.0372557945171,25.0895056774508,10.5333315098814,17.5543232255399,16.3665182899807,15.9002808529653,6.19711047017394,8.98285341900225,5.09610479413291,7.11066703153331,0,0,0,14.8439043634778,0,2.9688427812965,9.36820764537134,5.78484408793068,5.76538743140146,4.06951129492081,3.76283862834255,3.89566433121994,2.47194967734374,3.03658649531814,0.884610551949874,4.20593809863264,1.54589062922275,4.363877278217,0,2.63502717310392,1.8850203613211,1.27728527604296,0,0,0,1.9472783122627,1.83000241127451,1.13088916901578,1.91206752211504,2.30143911597297,2.49345653471472,1.78465389374533,10.6931332042832,4.22983700074316,4.54900965180614,0.631325567659422,1.43132487258974,2.06911893990126,1.80062129805349,2.41127708537144,3.06164246180975,3.58718416797579,2.99845518591132,0.517406741478031,0.215567992932842,0.945530400839096,2.81521798662318,3.94552318369635,1.66828349535359,3.48252166522167,2.26360350048738,9.15557627365069,0,0,0,3.52113813310353,4.45599513964083,3.96136535214233,5.44512891845984,3.73852040320067,3.23960937063494,3.95307706075693,4.29237442239391,2.6856028744449,8.3925523455875,3.61168420974009,2.1888578577381,2.92399974850665,1.97595103761946,1.74468344388483,1.05144974282064,0.92614151141356,1.65209391491899,0.528901133327089,3.62590025909898,4.64473343720877,4.12375876230699,2.42020229548011,1.33426826306922,2.66315876557583,3.32170343081158,1.81168850196412,2.76468729680296,2.78539060857611,2.14460495831032,3.59527763461689,2.16138049874694,2.58883655230677,5.87970492954553,6.39791670614481,4.50830942692322,5.7022371796688,5.23671715352589,7.925347647606,7.90456714053216,5.46157547524528,5.33795674660674,5.55287237648102,41.2069151651137,3.50374722003798,5.70021085828289,9.219346607779,12.9830477688642,17.8471098216788,21.1339456978578,19.5633373466551,20.9154442539796,34.0456152353221,44.5681440234799,56.193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| ||
|EntrezGene=192166 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q99LB7 | |||
|association_with_transcript=11bp_to_ENSMUST00000102886_5end | |||
|description=CAGE_peak_2_at_Sardh_5end | |||
|id=chr2:27102730..27102774,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!6.70e-16!98;UBERON:0005177!2.73e-15!85;UBERON:0000466!2.18e-14!79;UBERON:0009569!5.85e-14!66;UBERON:0005172!6.00e-13!49;UBERON:0005173!6.00e-13!49;UBERON:0002417!6.00e-13!49;UBERON:0000916!6.00e-13!49;UBERON:0003914!6.59e-13!47;UBERON:0002107!1.41e-12!22;UBERON:0007499!1.41e-12!22;UBERON:0006925!1.41e-12!22;UBERON:0009497!1.41e-12!22;UBERON:0000015!1.41e-12!22;UBERON:0002423!1.41e-12!22;UBERON:0006235!1.41e-12!22;UBERON:0008835!1.41e-12!22;UBERON:0003894!1.41e-12!22;UBERON:0004161!1.41e-12!22;UBERON:0008836!1.41e-12!22;UBERON:0005256!7.64e-12!47;UBERON:0002365!1.39e-11!25;UBERON:0002330!1.39e-11!25;UBERON:0009854!3.44e-11!23;UBERON:0009856!3.44e-11!23;UBERON:0003104!3.14e-08!131;UBERON:0009142!3.14e-08!131;UBERON:0000025!5.96e-08!114;UBERON:0004111!1.23e-07!122;UBERON:0000926!1.30e-07!193;UBERON:0004120!1.30e-07!193;UBERON:0006603!1.30e-07!193;UBERON:0001048!7.18e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.10e-15,90;UBERON:0005177,1.28e-15,79;UBERON:0009569,4.88e-14,66;UBERON:0003104,5.15e-14,61;UBERON:0009142,5.15e-14,61;UBERON:0003914,4.07e-13,47;UBERON:0002107,8.83e-13,22;UBERON:0007499,8.83e-13,22;UBERON:0006925,8.83e-13,22;UBERON:0009497,8.83e-13,22;UBERON:0000015,8.83e-13,22;UBERON:0002423,8.83e-13,22;UBERON:0006235,8.83e-13,22;UBERON:0008835,8.83e-13,22;UBERON:0003894,8.83e-13,22;UBERON:0004161,8.83e-13,22;UBERON:0008836,8.83e-13,22;UBERON:0005172,1.16e-12,49;UBERON:0005173,1.16e-12,49;UBERON:0002417,1.16e-12,49;UBERON:0000916,1.16e-12,49;UBERON:0002365,9.05e-12,25;UBERON:0002330,9.05e-12,25;UBERON:0005256,1.13e-11,45;UBERON:0009854,1.63e-11,23;UBERON:0009856,1.63e-11,23;UBERON:0000025,2.67e-07,114;UBERON:0004111,4.54e-07,122 | |||
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| |||
|short_description=p2@Sardh | |||
}} |
Revision as of 23:34, 13 September 2013
Short description: | p2@Sardh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sardh_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 11bp_to_ENSMUST00000102886_5end |
EntrezGene: | Sardh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 1.10e-15 | 90 |
trunk region element | 1.28e-15 | 79 |
subdivision of trunk | 4.88e-14 | 66 |
mesenchyme | 5.15e-14 | 61 |
entire embryonic mesenchyme | 5.15e-14 | 61 |
epithelial tube | 4.07e-13 | 47 |
liver | 8.83e-13 | 22 |
epithelial sac | 8.83e-13 | 22 |
digestive gland | 8.83e-13 | 22 |
epithelium of foregut-midgut junction | 8.83e-13 | 22 |
anatomical boundary | 8.83e-13 | 22 |
hepatobiliary system | 8.83e-13 | 22 |
foregut-midgut junction | 8.83e-13 | 22 |
hepatic diverticulum | 8.83e-13 | 22 |
liver primordium | 8.83e-13 | 22 |
septum transversum | 8.83e-13 | 22 |
liver bud | 8.83e-13 | 22 |
abdomen element | 1.16e-12 | 49 |
abdominal segment element | 1.16e-12 | 49 |
abdominal segment of trunk | 1.16e-12 | 49 |
abdomen | 1.16e-12 | 49 |
exocrine gland | 9.05e-12 | 25 |
exocrine system | 9.05e-12 | 25 |
trunk mesenchyme | 1.13e-11 | 45 |
digestive tract diverticulum | 1.63e-11 | 23 |
sac | 1.63e-11 | 23 |
tube | 2.67e-07 | 114 |
anatomical conduit | 4.54e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.