FFCP PHASE1:Mm9::chr2:28979626..28979686,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269254|HGNC=|MCL_coexpression_id=17|UniProt=A2AKX3|association_with_transcript=-14bp_to_ENSMUST00000129544_5end|description=CAGE_peak_3_at_Setx_5end|id=chr2:28979626..28979686,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.69e-08!15;UBERON:0000473!7.21e-08!14;UBERON:0003101!9.07e-08!16;UBERON:0000079!9.07e-08!16;UBERON:0000991!1.67e-07!18;UBERON:0005564!1.67e-07!18;UBERON:0004176!4.15e-07!17;UBERON:0009196!4.15e-07!17;UBERON:0009117!4.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.34e-17,15;UBERON:0000473,6.90e-16,14;UBERON:0003101,7.59e-16,16;UBERON:0000079,7.59e-16,16;UBERON:0000991,3.03e-15,18;UBERON:0005564,3.03e-15,18;UBERON:0004176,2.00e-14,17;UBERON:0009196,2.00e-14,17;UBERON:0009117,2.00e-14,17;UBERON:0003133,4.97e-12,24;UBERON:0003886,5.04e-12,38;UBERON:0002553,1.51e-11,39;UBERON:0002323,4.71e-11,37;UBERON:0004458,4.71e-11,37;UBERON:0005156,9.88e-11,26;UBERON:0000990,9.88e-11,26|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.645616617207881,0.985521055061667,0.70219357896598,1.36974374580404,1.19658238493005,1.54080656938085,1.04904482902797,0.666219523631325,0.607425802169478,1.39912375625629,0.315462165358238,0.959801035240171,0.42438965179803,103.752813984305,0.695036658406197,1.04479915655574,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0.7813353445238,0,0,0,0.971020706062307,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0,0,0,0.503347818173209,2.17608642603403,2.68875039313971,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,4.40463523997555,0.383062014255563,0.768032666281217,0.527545150920775,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,1.17851434189467,0.854230084794618,0.372798891650601,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,8.42666520790511,0,0,0.70667914902068,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,8.79215873836762,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0,0.470354828542819,0,0,0.144599356919912,1.76922110389975,1.13236794963186,0.441683036920787,0.484875253135222,0,0.585561594023094,0.209446706813455,0,3.35482348616577,4.79922184794726,3.17675567682662,0.748953197024114,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,1.01839363850316,2.86136032403214,6.31806896084187,0.420883711772948,1.30120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.95251098811859,1.0249097622788,1.03071897015702,0.258703370739016,0.646703978798527,0.756424320671277,1.23165786914764,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,1.19420560091096,2.80885274925294,2.57347907114715,1.98914449576915,0.207125772535502,1.17263029990548,0,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0.656669856316381,0.243206428637567,0.146199987425332,0.658650345873152,0.134206418760372,0,0.92614151141356,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.911765658574141,0.316182685621286,0.295220295959204,0,0.370191491765402,0,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,1.14075483509418,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,0.390267295715598,1.26108115284953,1.10732344824387,0,0.163863314715738,0.518054945597687,0.289298117163023,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0.703270119553219,0.491804836130026,0.504941854408746,0,0,0,0.477937595905104,0,0.566153061577665,0.809621403349789,1.46127928955656,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,1.45413491791002,0,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.857348140126369,0.354680467284547,0.713475270408282,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.301564624640779,0,0.164140899745061,0.582961673259701,0.18542530201051,1.02522528478712,1.03193433981611,0.555583582109135,2.0720530270516,1.91371918809435,1.14389086603261,1.86976272993241,2.51912614182584,1.24379976423981,0,0.316335993581135,1.21991680276109,0.648032044930808,0.627264888043406,0.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| ||
|EntrezGene=269254 | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|UniProt=A2AKX3 | |||
|association_with_transcript=-14bp_to_ENSMUST00000129544_5end | |||
|description=CAGE_peak_3_at_Setx_5end | |||
|id=chr2:28979626..28979686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.69e-08!15;UBERON:0000473!7.21e-08!14;UBERON:0003101!9.07e-08!16;UBERON:0000079!9.07e-08!16;UBERON:0000991!1.67e-07!18;UBERON:0005564!1.67e-07!18;UBERON:0004176!4.15e-07!17;UBERON:0009196!4.15e-07!17;UBERON:0009117!4.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.34e-17,15;UBERON:0000473,6.90e-16,14;UBERON:0003101,7.59e-16,16;UBERON:0000079,7.59e-16,16;UBERON:0000991,3.03e-15,18;UBERON:0005564,3.03e-15,18;UBERON:0004176,2.00e-14,17;UBERON:0009196,2.00e-14,17;UBERON:0009117,2.00e-14,17;UBERON:0003133,4.97e-12,24;UBERON:0003886,5.04e-12,38;UBERON:0002553,1.51e-11,39;UBERON:0002323,4.71e-11,37;UBERON:0004458,4.71e-11,37;UBERON:0005156,9.88e-11,26;UBERON:0000990,9.88e-11,26 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.645616617207881,0.985521055061667,0.70219357896598,1.36974374580404,1.19658238493005,1.54080656938085,1.04904482902797,0.666219523631325,0.607425802169478,1.39912375625629,0.315462165358238,0.959801035240171,0.42438965179803,103.752813984305,0.695036658406197,1.04479915655574,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0.7813353445238,0,0,0,0.971020706062307,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0,0,0,0.503347818173209,2.17608642603403,2.68875039313971,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,4.40463523997555,0.383062014255563,0.768032666281217,0.527545150920775,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,1.17851434189467,0.854230084794618,0.372798891650601,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,8.42666520790511,0,0,0.70667914902068,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,8.79215873836762,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0,0.470354828542819,0,0,0.144599356919912,1.76922110389975,1.13236794963186,0.441683036920787,0.484875253135222,0,0.585561594023094,0.209446706813455,0,3.35482348616577,4.79922184794726,3.17675567682662,0.748953197024114,0,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,1.01839363850316,2.86136032403214,6.31806896084187,0.420883711772948,1.30120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.95251098811859,1.0249097622788,1.03071897015702,0.258703370739016,0.646703978798527,0.756424320671277,1.23165786914764,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,1.19420560091096,2.80885274925294,2.57347907114715,1.98914449576915,0.207125772535502,1.17263029990548,0,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0.656669856316381,0.243206428637567,0.146199987425332,0.658650345873152,0.134206418760372,0,0.92614151141356,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.911765658574141,0.316182685621286,0.295220295959204,0,0.370191491765402,0,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,1.14075483509418,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,0.390267295715598,1.26108115284953,1.10732344824387,0,0.163863314715738,0.518054945597687,0.289298117163023,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0.703270119553219,0.491804836130026,0.504941854408746,0,0,0,0.477937595905104,0,0.566153061577665,0.809621403349789,1.46127928955656,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,1.45413491791002,0,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.857348140126369,0.354680467284547,0.713475270408282,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.301564624640779,0,0.164140899745061,0.582961673259701,0.18542530201051,1.02522528478712,1.03193433981611,0.555583582109135,2.0720530270516,1.91371918809435,1.14389086603261,1.86976272993241,2.51912614182584,1.24379976423981,0,0.316335993581135,1.21991680276109,0.648032044930808,0.627264888043406,0.436725127492355,0.539457385539283,1.07449492442937,0,0.259229946583586,0,316.231738601831,1.34564891439581,2.31641886639937,12.444876054019,6.32883135040882,8.61676240002969,3.0512882047896,2.21347454234715,9.6470596871654,436.784090453419,322.305577002551,0.316011120628178,0,0.924398614483445,1.29920822977795,1.43221356533985,0.993406773906324,0.841368146639782,0.738447635872886,1.21159739937777,0.914481679859998,0.201652370273681,1.36441033035653,0.769694733122636,0.467507608726276,0,4.43971906748129,8.25367480807176,2.51826924546118,0.386379188064381,0,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0.726511433089237,1.19707462020309,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.512201219238954,0.402048282689293,0,0.579421629724277,0.192909220463705,0,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.4705469020766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| |||
|short_description=p3@Setx | |||
}} |
Revision as of 23:38, 13 September 2013
Short description: | p3@Setx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Setx_5end |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | -14bp_to_ENSMUST00000129544_5end |
EntrezGene: | Setx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.34e-17 | 15 |
testis | 6.90e-16 | 14 |
male organism | 7.59e-16 | 16 |
male reproductive system | 7.59e-16 | 16 |
gonad | 3.03e-15 | 18 |
gonad primordium | 3.03e-15 | 18 |
external genitalia | 2.00e-14 | 17 |
indifferent external genitalia | 2.00e-14 | 17 |
indifferent gonad | 2.00e-14 | 17 |
reproductive organ | 4.97e-12 | 24 |
body cavity precursor | 5.04e-12 | 38 |
anatomical cavity | 1.51e-11 | 39 |
body cavity | 4.71e-11 | 37 |
body cavity or lining | 4.71e-11 | 37 |
reproductive structure | 9.88e-11 | 26 |
reproductive system | 9.88e-11 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.