FFCP PHASE1:Mm9::chr2:4983990..4984000,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:4983990..4984000,-|id=chr2:4983990..4984000,-|ontology_enrichment_celltype=CL:0000181!1.05e-07!5;CL:0000417!1.05e-07!5;CL:0000668!1.05e-07!5;CL:0000412!1.05e-07!5;CL:0000182!1.05e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,4.65e-12,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.59e-20!22;UBERON:0007499!1.59e-20!22;UBERON:0006925!1.59e-20!22;UBERON:0009497!1.59e-20!22;UBERON:0000015!1.59e-20!22;UBERON:0002423!1.59e-20!22;UBERON:0006235!1.59e-20!22;UBERON:0008835!1.59e-20!22;UBERON:0003894!1.59e-20!22;UBERON:0004161!1.59e-20!22;UBERON:0008836!1.59e-20!22;UBERON:0009854!1.86e-19!23;UBERON:0009856!1.86e-19!23;UBERON:0002365!1.40e-17!25;UBERON:0002330!1.40e-17!25;UBERON:0003929!4.88e-09!55;UBERON:0004921!7.43e-09!126;UBERON:0004185!7.43e-09!126;UBERON:0003914!9.27e-09!47;UBERON:0001007!1.33e-08!128;UBERON:0001555!1.33e-08!128;UBERON:0007026!1.33e-08!128;UBERON:0004119!2.34e-08!130;UBERON:0000925!2.34e-08!130;UBERON:0006595!2.34e-08!130;UBERON:0005172!4.19e-08!49;UBERON:0005173!4.19e-08!49;UBERON:0002417!4.19e-08!49;UBERON:0000916!4.19e-08!49;UBERON:0005057!1.23e-07!51;UBERON:0005256!1.46e-07!47;UBERON:0005911!3.64e-07!69;UBERON:0000490!8.41e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-40,22;UBERON:0007499,3.30e-40,22;UBERON:0006925,3.30e-40,22;UBERON:0009497,3.30e-40,22;UBERON:0000015,3.30e-40,22;UBERON:0002423,3.30e-40,22;UBERON:0006235,3.30e-40,22;UBERON:0008835,3.30e-40,22;UBERON:0003894,3.30e-40,22;UBERON:0004161,3.30e-40,22;UBERON:0008836,3.30e-40,22;UBERON:0009854,2.06e-38,23;UBERON:0009856,2.06e-38,23;UBERON:0002365,2.97e-35,25;UBERON:0002330,2.97e-35,25;UBERON:0005256,4.57e-19,45;UBERON:0003914,3.35e-18,47;UBERON:0005172,2.08e-17,49;UBERON:0005173,2.08e-17,49;UBERON:0002417,2.08e-17,49;UBERON:0000916,2.08e-17,49;UBERON:0003929,2.27e-15,55;UBERON:0002368,5.58e-14,60;UBERON:0003104,9.93e-14,61;UBERON:0009142,9.93e-14,61;UBERON:0002530,8.39e-13,65;UBERON:0000490,1.37e-12,66;UBERON:0009569,1.37e-12,66;UBERON:0005911,5.55e-12,69;UBERON:0000949,2.00e-11,72;UBERON:0005177,2.73e-10,79;UBERON:0001041,3.82e-10,80;UBERON:0002100,7.36e-09,90|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,7.6164570806547,1.68533304158102,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,3.26097889795864,0,0,0,0,0,0.25462585178142,0,1.78348749452539,1.92192989231657,4.31304619582064,1.86070473834252,2.18426371180192,3.03094653536534,4.4849353380478,6.27176577772377,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr2:4983990..4984000,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:4983990..4984000,- | |||
|id=chr2:4983990..4984000,- | |||
|ontology_enrichment_celltype=CL:0000181!1.05e-07!5;CL:0000417!1.05e-07!5;CL:0000668!1.05e-07!5;CL:0000412!1.05e-07!5;CL:0000182!1.05e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.65e-12,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.59e-20!22;UBERON:0007499!1.59e-20!22;UBERON:0006925!1.59e-20!22;UBERON:0009497!1.59e-20!22;UBERON:0000015!1.59e-20!22;UBERON:0002423!1.59e-20!22;UBERON:0006235!1.59e-20!22;UBERON:0008835!1.59e-20!22;UBERON:0003894!1.59e-20!22;UBERON:0004161!1.59e-20!22;UBERON:0008836!1.59e-20!22;UBERON:0009854!1.86e-19!23;UBERON:0009856!1.86e-19!23;UBERON:0002365!1.40e-17!25;UBERON:0002330!1.40e-17!25;UBERON:0003929!4.88e-09!55;UBERON:0004921!7.43e-09!126;UBERON:0004185!7.43e-09!126;UBERON:0003914!9.27e-09!47;UBERON:0001007!1.33e-08!128;UBERON:0001555!1.33e-08!128;UBERON:0007026!1.33e-08!128;UBERON:0004119!2.34e-08!130;UBERON:0000925!2.34e-08!130;UBERON:0006595!2.34e-08!130;UBERON:0005172!4.19e-08!49;UBERON:0005173!4.19e-08!49;UBERON:0002417!4.19e-08!49;UBERON:0000916!4.19e-08!49;UBERON:0005057!1.23e-07!51;UBERON:0005256!1.46e-07!47;UBERON:0005911!3.64e-07!69;UBERON:0000490!8.41e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-40,22;UBERON:0007499,3.30e-40,22;UBERON:0006925,3.30e-40,22;UBERON:0009497,3.30e-40,22;UBERON:0000015,3.30e-40,22;UBERON:0002423,3.30e-40,22;UBERON:0006235,3.30e-40,22;UBERON:0008835,3.30e-40,22;UBERON:0003894,3.30e-40,22;UBERON:0004161,3.30e-40,22;UBERON:0008836,3.30e-40,22;UBERON:0009854,2.06e-38,23;UBERON:0009856,2.06e-38,23;UBERON:0002365,2.97e-35,25;UBERON:0002330,2.97e-35,25;UBERON:0005256,4.57e-19,45;UBERON:0003914,3.35e-18,47;UBERON:0005172,2.08e-17,49;UBERON:0005173,2.08e-17,49;UBERON:0002417,2.08e-17,49;UBERON:0000916,2.08e-17,49;UBERON:0003929,2.27e-15,55;UBERON:0002368,5.58e-14,60;UBERON:0003104,9.93e-14,61;UBERON:0009142,9.93e-14,61;UBERON:0002530,8.39e-13,65;UBERON:0000490,1.37e-12,66;UBERON:0009569,1.37e-12,66;UBERON:0005911,5.55e-12,69;UBERON:0000949,2.00e-11,72;UBERON:0005177,2.73e-10,79;UBERON:0001041,3.82e-10,80;UBERON:0002100,7.36e-09,90 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,7.6164570806547,1.68533304158102,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,3.26097889795864,0,0,0,0,0,0.25462585178142,0,1.78348749452539,1.92192989231657,4.31304619582064,1.86070473834252,2.18426371180192,3.03094653536534,4.4849353380478,6.27176577772377,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr2:4983990..4984000,- | |||
}} |
Revision as of 00:04, 14 September 2013
Short description: | p@chr2:4983990..4984000, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:4983990..4984000, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.65e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.30e-40 | 22 |
epithelial sac | 3.30e-40 | 22 |
digestive gland | 3.30e-40 | 22 |
epithelium of foregut-midgut junction | 3.30e-40 | 22 |
anatomical boundary | 3.30e-40 | 22 |
hepatobiliary system | 3.30e-40 | 22 |
foregut-midgut junction | 3.30e-40 | 22 |
hepatic diverticulum | 3.30e-40 | 22 |
liver primordium | 3.30e-40 | 22 |
septum transversum | 3.30e-40 | 22 |
liver bud | 3.30e-40 | 22 |
digestive tract diverticulum | 2.06e-38 | 23 |
sac | 2.06e-38 | 23 |
exocrine gland | 2.97e-35 | 25 |
exocrine system | 2.97e-35 | 25 |
trunk mesenchyme | 4.57e-19 | 45 |
epithelial tube | 3.35e-18 | 47 |
abdomen element | 2.08e-17 | 49 |
abdominal segment element | 2.08e-17 | 49 |
abdominal segment of trunk | 2.08e-17 | 49 |
abdomen | 2.08e-17 | 49 |
gut epithelium | 2.27e-15 | 55 |
endocrine gland | 5.58e-14 | 60 |
mesenchyme | 9.93e-14 | 61 |
entire embryonic mesenchyme | 9.93e-14 | 61 |
gland | 8.39e-13 | 65 |
unilaminar epithelium | 1.37e-12 | 66 |
subdivision of trunk | 1.37e-12 | 66 |
endo-epithelium | 5.55e-12 | 69 |
endocrine system | 2.00e-11 | 72 |
trunk region element | 2.73e-10 | 79 |
foregut | 3.82e-10 | 80 |
trunk | 7.36e-09 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.