FFCP PHASE1:Hg19::chr7:18891010..18891018,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14065|TSSclassifier=N|UniProt=|association_with_transcript=-4bp_to_ENST00000496026_5end|description=CAGE_peak_36_at_HDAC9_5end|id=chr7:18891010..18891018,+|ontology_enrichment_celltype=CL:0002551!4.34e-10!6;CL:0002574!7.50e-08!1;CL:0002566!4.90e-07!1|ontology_enrichment_celltype_v019=CL:0002574;5.97e-34;1!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000333;6.78e-08;5!CL:0002559;6.78e-08;5!CL:0002551;7.17e-07;6|ontology_enrichment_celltype_v019_2=CL:0002574,3.61e-34,1;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002559,6.55e-08,5;CL:0002551,7.17e-07,6|ontology_enrichment_development_v019=UBERON:0009117;3.14e-14;10!UBERON:0005564;3.14e-14;10|ontology_enrichment_disease=DOID:0050619!1.25e-07!1;DOID:1357!1.25e-07!1|ontology_enrichment_disease_v019=DOID:169;8.72e-07;6|ontology_enrichment_disease_v019_2=DOID:169,9.49e-07,6|ontology_enrichment_uberon=UBERON:0002067!1.56e-11!9;UBERON:0004016!1.56e-11!9;UBERON:0010083!1.56e-11!9;UBERON:0001764!1.25e-07!1;UBERON:0001825!1.25e-07!1;UBERON:0000473!1.38e-07!8;UBERON:0007190!4.61e-07!1|ontology_enrichment_uberon_v019=UBERON:0000473;1.64e-17;8!UBERON:0002067;1.01e-15;9!UBERON:0003135;4.95e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0002073;6.78e-08;5!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5!UBERON:0000991;2.73e-07;21!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-17,8;UBERON:0002067,9.73e-16,9;UBERON:0004016,9.73e-16,9;UBERON:0010083,9.73e-16,9;UBERON:0003135,5.10e-13,11;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0000013,7.49e-08,5;UBERON:0002410,7.49e-08,5;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0002323,3.33e-07,46;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22;UBERON:0004458,8.40e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40560046066918,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65078867489357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0.475680363110274,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,2.5006970412019,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p36@HDAC9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000496026_5end | |||
|description=CAGE_peak_36_at_HDAC9_5end | |||
|id=chr7:18891010..18891018,+ | |||
|ontology_enrichment_celltype=CL:0002551!4.34e-10!6;CL:0002574!7.50e-08!1;CL:0002566!4.90e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002574;5.97e-34;1!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000333;6.78e-08;5!CL:0002559;6.78e-08;5!CL:0002551;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,3.61e-34,1;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002559,6.55e-08,5;CL:0002551,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.14e-14;10!UBERON:0005564;3.14e-14;10 | |||
|ontology_enrichment_disease=DOID:0050619!1.25e-07!1;DOID:1357!1.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:169;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002067!1.56e-11!9;UBERON:0004016!1.56e-11!9;UBERON:0010083!1.56e-11!9;UBERON:0001764!1.25e-07!1;UBERON:0001825!1.25e-07!1;UBERON:0000473!1.38e-07!8;UBERON:0007190!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.64e-17;8!UBERON:0002067;1.01e-15;9!UBERON:0003135;4.95e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0002073;6.78e-08;5!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5!UBERON:0000991;2.73e-07;21!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-17,8;UBERON:0002067,9.73e-16,9;UBERON:0004016,9.73e-16,9;UBERON:0010083,9.73e-16,9;UBERON:0003135,5.10e-13,11;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0000013,7.49e-08,5;UBERON:0002410,7.49e-08,5;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0002323,3.33e-07,46;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22;UBERON:0004458,8.40e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40560046066918,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65078867489357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0.475680363110274,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,2.5006970412019,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p36@HDAC9 | |||
}} |
Revision as of 00:22, 14 September 2013
Short description: | p36@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_HDAC9_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000496026_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 3.61e-34 | 1 |
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
hair follicle cell | 6.55e-08 | 5 |
fibroblast of dermis | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-17 | 8 |
dermis | 9.73e-16 | 9 |
dermatome | 9.73e-16 | 9 |
future dermis | 9.73e-16 | 9 |
male reproductive organ | 5.10e-13 | 11 |
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
sympathetic nervous system | 7.49e-08 | 5 |
autonomic nervous system | 7.49e-08 | 5 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
body cavity | 3.33e-07 | 46 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
body cavity or lining | 8.40e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.