Personal tools

FFCP PHASE1:Mm9::chr2:68973840..68973854,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=329416|HGNC=|MCL_coexpression_id=3361|UniProt=Q6WKZ7|association_with_transcript=-2bp_to_ENSMUST00000041865,NM_181547,uc008jxt.2_5end|description=CAGE_peak_3_at_Nostrin_5end|id=chr2:68973840..68973854,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.52e-07,6;CL:0000677,2.52e-07,6;CL:0000584,2.52e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.83e-14!130;UBERON:0000925!7.83e-14!130;UBERON:0006595!7.83e-14!130;UBERON:0001007!8.65e-13!128;UBERON:0001555!8.65e-13!128;UBERON:0007026!8.65e-13!128;UBERON:0004921!8.94e-12!126;UBERON:0004185!8.94e-12!126;UBERON:0005409!1.02e-10!59;UBERON:0004923!1.10e-09!24;UBERON:0000160!3.06e-08!43;UBERON:0009569!1.58e-07!66;UBERON:0000344!2.41e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.21e-13,118;UBERON:0000925,5.21e-13,118;UBERON:0006595,5.21e-13,118;UBERON:0000160,2.88e-12,31;UBERON:0001007,1.09e-11,116;UBERON:0001555,1.09e-11,116;UBERON:0007026,1.09e-11,116;UBERON:0004923,4.71e-11,24;UBERON:0004921,2.02e-10,114;UBERON:0005409,2.69e-10,47;UBERON:0000344,2.35e-09,15;UBERON:0002048,2.87e-08,14;UBERON:0000117,2.87e-08,14;UBERON:0000171,2.87e-08,14;UBERON:0000170,2.87e-08,14;UBERON:0005597,2.87e-08,14;UBERON:0000118,2.87e-08,14;UBERON:0001242,1.94e-07,13;UBERON:0001262,1.94e-07,13;UBERON:0004786,1.94e-07,13|phase1_expression=0,13.9590163055744,10.0099832665698,2.72217790176147,2.00358291978539,5.37213670118047,5.37309073369709,0,0.140788722151667,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.946386496074713,0.685572168028694,0,1.10556277196391,0.297872853602656,0,7.67963629408352,5.04700418347774,12.0588712464154,11.630573896295,9.04979177280734,3.04037471130198,2.01624103807945,3.76941868114018,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,1.25559489221072,3.1253413780952,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,4.30211938490693,0,0,1.29955283489534,0.896053774194671,0.702222100658759,1.70430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,1.37020655662872,4.91981978929626,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.628332956648377,3.21353458054686,1.01219549843938,1.76922110389975,0.485300549842228,0,0.484875253135222,3.72783522436244,0,0,2.29911349687732,1.67741174308288,1.19980546198682,1.52484272487678,0,0,0.125654352112864,0,0,0,0.324482526135515,0.509196819251581,0.746441823660558,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,0,2.1066395619397,1.54408744268829,3.12579849335152,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.462801338662135,1.39520366850245,1.3413670069981,1.5179494507732,0.822799249567402,2.13417703302824,2.26992666728396,1.16959989940266,2.19550115291051,1.47627060636409,0,0.205809224758569,3.30418782983798,1.58670339998127,0.426576501070468,0.464473343720877,0.77320476793256,1.61346819698674,2.00140239460383,0.380451252225118,1.42358718463353,0.988193728344065,1.00534083520108,2.18852119245266,2.14460495831032,1.79763881730844,2.37751854862164,2.19055400579804,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,1.19230893813542,1.39120381673366,0.885660887877613,1.255989822731,0.987177311374404,1.48226313543574,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.37280706594041,0,1.86070473834252,0.936113019343682,2.02063102357689,2.51156378930677,0.964887042726734,4.0645701836653,0.189491411770485,0.325929952884052,0.848725428875941,1.64283173801951,1.84256883185997,3.57065461329021,4.48807390072937,6.30540576424764,4.20782910332672,4.46473352240964,7.04612253277673,3.45369963731791,6.07526046042349,9.04747703635634,3.80733978673097,0,0.551873492609465,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.488660878060728,0.989820737835213,0,0,0.906970670894253,0.565815239267694,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,1.06949213515416,1.26414703174326,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,6.8054795338476,4.87213762986786,0.882113592219848,0.49465875882444,0.807322133479528,0.422190474497091,0.358117032009409,0.492422699235184,2.62332752966866,0.741701208042039,1.19609616558497,1.23832120777933,1.66675074632741,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0.813277868507395,0.972048067396211,0.627264888043406,0.655087691238533,1.61837215661785,0.909188012978695,2.6175594198403,1.42576470620972,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.576060012515731,0.632022241256357,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0.198681354781265,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.779663045918019,0.865906574762965,0.233753804363138,0,0.221985953374065,0,0,1.35232715822533,1.68914227906064,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0,0.243106717068294,0.838452650511929,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0,0.377252682772152,0.936415074698824,0.512201219238954,0.574354689556133,0.476293691283074,0.463537303779422,1.35036454324594,0.412085900803307,0,1.02860775715625,0.887379030796687,0.715308569841963,1.45346416632329,0.846984423737976,0.676916863133412,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.355905054372522,0.886540341380071,1.63692417267876,0.929621047115796,1.35034627686799,0,1.16965804222704,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p3@Nostrin}}
|EntrezGene=329416
|HGNC=
|MCL_coexpression_id=3361
|UniProt=Q6WKZ7
|association_with_transcript=-2bp_to_ENSMUST00000041865,NM_181547,uc008jxt.2_5end
|description=CAGE_peak_3_at_Nostrin_5end
|id=chr2:68973840..68973854,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,2.52e-07,6;CL:0000677,2.52e-07,6;CL:0000584,2.52e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.83e-14!130;UBERON:0000925!7.83e-14!130;UBERON:0006595!7.83e-14!130;UBERON:0001007!8.65e-13!128;UBERON:0001555!8.65e-13!128;UBERON:0007026!8.65e-13!128;UBERON:0004921!8.94e-12!126;UBERON:0004185!8.94e-12!126;UBERON:0005409!1.02e-10!59;UBERON:0004923!1.10e-09!24;UBERON:0000160!3.06e-08!43;UBERON:0009569!1.58e-07!66;UBERON:0000344!2.41e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.21e-13,118;UBERON:0000925,5.21e-13,118;UBERON:0006595,5.21e-13,118;UBERON:0000160,2.88e-12,31;UBERON:0001007,1.09e-11,116;UBERON:0001555,1.09e-11,116;UBERON:0007026,1.09e-11,116;UBERON:0004923,4.71e-11,24;UBERON:0004921,2.02e-10,114;UBERON:0005409,2.69e-10,47;UBERON:0000344,2.35e-09,15;UBERON:0002048,2.87e-08,14;UBERON:0000117,2.87e-08,14;UBERON:0000171,2.87e-08,14;UBERON:0000170,2.87e-08,14;UBERON:0005597,2.87e-08,14;UBERON:0000118,2.87e-08,14;UBERON:0001242,1.94e-07,13;UBERON:0001262,1.94e-07,13;UBERON:0004786,1.94e-07,13
|phase1_expression=0,13.9590163055744,10.0099832665698,2.72217790176147,2.00358291978539,5.37213670118047,5.37309073369709,0,0.140788722151667,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.946386496074713,0.685572168028694,0,1.10556277196391,0.297872853602656,0,7.67963629408352,5.04700418347774,12.0588712464154,11.630573896295,9.04979177280734,3.04037471130198,2.01624103807945,3.76941868114018,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,1.25559489221072,3.1253413780952,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,4.30211938490693,0,0,1.29955283489534,0.896053774194671,0.702222100658759,1.70430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,1.37020655662872,4.91981978929626,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.628332956648377,3.21353458054686,1.01219549843938,1.76922110389975,0.485300549842228,0,0.484875253135222,3.72783522436244,0,0,2.29911349687732,1.67741174308288,1.19980546198682,1.52484272487678,0,0,0.125654352112864,0,0,0,0.324482526135515,0.509196819251581,0.746441823660558,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,0,2.1066395619397,1.54408744268829,3.12579849335152,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.462801338662135,1.39520366850245,1.3413670069981,1.5179494507732,0.822799249567402,2.13417703302824,2.26992666728396,1.16959989940266,2.19550115291051,1.47627060636409,0,0.205809224758569,3.30418782983798,1.58670339998127,0.426576501070468,0.464473343720877,0.77320476793256,1.61346819698674,2.00140239460383,0.380451252225118,1.42358718463353,0.988193728344065,1.00534083520108,2.18852119245266,2.14460495831032,1.79763881730844,2.37751854862164,2.19055400579804,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,1.19230893813542,1.39120381673366,0.885660887877613,1.255989822731,0.987177311374404,1.48226313543574,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.37280706594041,0,1.86070473834252,0.936113019343682,2.02063102357689,2.51156378930677,0.964887042726734,4.0645701836653,0.189491411770485,0.325929952884052,0.848725428875941,1.64283173801951,1.84256883185997,3.57065461329021,4.48807390072937,6.30540576424764,4.20782910332672,4.46473352240964,7.04612253277673,3.45369963731791,6.07526046042349,9.04747703635634,3.80733978673097,0,0.551873492609465,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.488660878060728,0.989820737835213,0,0,0.906970670894253,0.565815239267694,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,1.06949213515416,1.26414703174326,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,6.8054795338476,4.87213762986786,0.882113592219848,0.49465875882444,0.807322133479528,0.422190474497091,0.358117032009409,0.492422699235184,2.62332752966866,0.741701208042039,1.19609616558497,1.23832120777933,1.66675074632741,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0.813277868507395,0.972048067396211,0.627264888043406,0.655087691238533,1.61837215661785,0.909188012978695,2.6175594198403,1.42576470620972,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.576060012515731,0.632022241256357,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0.198681354781265,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.779663045918019,0.865906574762965,0.233753804363138,0,0.221985953374065,0,0,1.35232715822533,1.68914227906064,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0,0.243106717068294,0.838452650511929,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0,0.377252682772152,0.936415074698824,0.512201219238954,0.574354689556133,0.476293691283074,0.463537303779422,1.35036454324594,0.412085900803307,0,1.02860775715625,0.887379030796687,0.715308569841963,1.45346416632329,0.846984423737976,0.676916863133412,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.355905054372522,0.886540341380071,1.63692417267876,0.929621047115796,1.35034627686799,0,1.16965804222704,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421
|short_description=p3@Nostrin
}}

Revision as of 00:22, 14 September 2013

Short description:p3@Nostrin
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nostrin_5end
Coexpression cluster:MCL_coexpression_mm9:3361
Association with transcript: -2bp_to_ENSMUST00000041865, NM_181547, uc008jxt.2_5end
EntrezGene:Nostrin
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nostrin

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I29.05
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell2.52e-076
gut absorptive cell2.52e-076
enterocyte2.52e-076

Uber anatomy
Ontology termp-valuen
endoderm-derived structure5.21e-13118
endoderm5.21e-13118
presumptive endoderm5.21e-13118
intestine2.88e-1231
digestive system1.09e-11116
digestive tract1.09e-11116
primitive gut1.09e-11116
organ component layer4.71e-1124
subdivision of digestive tract2.02e-10114
gastrointestinal system2.69e-1047
mucosa2.35e-0915
lung2.87e-0814
respiratory tube2.87e-0814
respiration organ2.87e-0814
pair of lungs2.87e-0814
lung primordium2.87e-0814
lung bud2.87e-0814
intestinal mucosa1.94e-0713
wall of intestine1.94e-0713
gastrointestinal system mucosa1.94e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:68973840..68973854,%2B&oldid=2989224"