FFCP PHASE1:Mm9::chr2:72070352..72070364,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=95|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128165,uc008kbr.1_5end|description=CAGE_peak_1_at_ENSMUST00000128165_5end,CAGE_peak_1_at_uc008kbr.1_5end|id=chr2:72070352..72070364,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,3.19e-25,2;CL:0002604,3.19e-25,2;CL:0000128,4.19e-09,6;CL:0000126,4.19e-09,6;CL:0000127,4.19e-09,6;CL:0002453,4.66e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!2.81e-08!12;UBERON:0001032!2.81e-08!12;UBERON:0004456!2.81e-08!12;UBERON:0005085!1.61e-07!13;UBERON:0000970!9.08e-07!9;UBERON:0000019!9.08e-07!9;UBERON:0000047!9.08e-07!9;UBERON:0004088!9.08e-07!9;UBERON:0002104!9.08e-07!9;UBERON:0001456!9.08e-07!9;UBERON:0003072!9.08e-07!9;UBERON:0003071!9.08e-07!9;UBERON:0004128!9.08e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001255,3.62e-14,1;UBERON:0001556,3.62e-14,1;UBERON:0000998,4.85e-14,1;UBERON:0007194,4.85e-14,1;UBERON:0006868,4.85e-14,1;UBERON:0001954,6.16e-08,7;UBERON:0003022,6.16e-08,7;UBERON:0002421,6.16e-08,7;UBERON:0000349,6.16e-08,7;UBERON:0002600,6.16e-08,7;UBERON:0010147,1.14e-07,2;UBERON:0003937,1.14e-07,2;UBERON:0005399,1.14e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,1.36100929351998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,1.89397670297827,0.130120442962704,0,0,0,0.204109497453984,0.512454881139399,0.281105173679186,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.404593039154462,0.495920734352016,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.603866776599,0,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.220591419119515,0|short_description=p1@ENSMUST00000128165,p1@uc008kbr.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=95 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128165,uc008kbr.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000128165_5end,CAGE_peak_1_at_uc008kbr.1_5end | |||
|id=chr2:72070352..72070364,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.19e-25,2;CL:0002604,3.19e-25,2;CL:0000128,4.19e-09,6;CL:0000126,4.19e-09,6;CL:0000127,4.19e-09,6;CL:0002453,4.66e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!2.81e-08!12;UBERON:0001032!2.81e-08!12;UBERON:0004456!2.81e-08!12;UBERON:0005085!1.61e-07!13;UBERON:0000970!9.08e-07!9;UBERON:0000019!9.08e-07!9;UBERON:0000047!9.08e-07!9;UBERON:0004088!9.08e-07!9;UBERON:0002104!9.08e-07!9;UBERON:0001456!9.08e-07!9;UBERON:0003072!9.08e-07!9;UBERON:0003071!9.08e-07!9;UBERON:0004128!9.08e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,3.62e-14,1;UBERON:0001556,3.62e-14,1;UBERON:0000998,4.85e-14,1;UBERON:0007194,4.85e-14,1;UBERON:0006868,4.85e-14,1;UBERON:0001954,6.16e-08,7;UBERON:0003022,6.16e-08,7;UBERON:0002421,6.16e-08,7;UBERON:0000349,6.16e-08,7;UBERON:0002600,6.16e-08,7;UBERON:0010147,1.14e-07,2;UBERON:0003937,1.14e-07,2;UBERON:0005399,1.14e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,1.36100929351998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,1.89397670297827,0.130120442962704,0,0,0,0.204109497453984,0.512454881139399,0.281105173679186,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.404593039154462,0.495920734352016,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.603866776599,0,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000128165,p1@uc008kbr.1 | |||
}} |
Revision as of 00:28, 14 September 2013
Short description: | p1@ENSMUST00000128165, p1@uc008kbr.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000128165_5end, CAGE_peak_1_at_uc008kbr.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | 0bp_to_ENSMUST00000128165, uc008kbr.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.19e-25 | 2 |
astrocyte of the hippocampus | 3.19e-25 | 2 |
oligodendrocyte | 4.19e-09 | 6 |
macroglial cell | 4.19e-09 | 6 |
astrocyte | 4.19e-09 | 6 |
oligodendrocyte precursor cell | 4.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 3.62e-14 | 1 |
lower urinary tract | 3.62e-14 | 1 |
seminal vesicle | 4.85e-14 | 1 |
vesicular gland | 4.85e-14 | 1 |
seminal fluid secreting gland | 4.85e-14 | 1 |
Ammon's horn | 6.16e-08 | 7 |
lobe parts of cerebral cortex | 6.16e-08 | 7 |
hippocampal formation | 6.16e-08 | 7 |
limbic system | 6.16e-08 | 7 |
limbic lobe | 6.16e-08 | 7 |
male accessory sex gland | 1.14e-07 | 2 |
sex gland | 1.14e-07 | 2 |
male reproductive gland | 1.14e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.