FFCP PHASE1:Mm9::chr3:103607044..103607052,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503157|HGNC=|MCL_coexpression_id=37|UniProt=|association_with_transcript=0bp_to_ENSMUST00000149374,NR_040412,uc008qtn.1_5end|description=CAGE_peak_1_at_Gm15471_5end|id=chr3:103607044..103607052,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000215,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!5.97e-09!14;UBERON:0003918!5.97e-09!14;UBERON:0005095!5.97e-09!14;UBERON:0007687!5.97e-09!14;UBERON:0003100!8.27e-09!11;UBERON:0006554!1.06e-07!16;UBERON:0001911!3.27e-07!2;UBERON:0000076!3.27e-07!2;UBERON:0005333!3.27e-07!2;UBERON:0008425!3.27e-07!2;UBERON:0005311!3.27e-07!2;UBERON:0001008!3.44e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.23e-36,2;UBERON:0000076,4.23e-36,2;UBERON:0005333,4.23e-36,2;UBERON:0008425,4.23e-36,2;UBERON:0005311,4.23e-36,2;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1;UBERON:0006834,2.59e-18,1;UBERON:0003100,4.28e-15,11;UBERON:0002365,4.23e-07,25;UBERON:0002330,4.23e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0.280543279561274,0.758838445491087,0.885660887877613,0.784993639206874,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.7811124068174,12.417153583713,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm15471}} | ||
|EntrezGene=100503157 | |||
|HGNC= | |||
|MCL_coexpression_id=37 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000149374,NR_040412,uc008qtn.1_5end | |||
|description=CAGE_peak_1_at_Gm15471_5end | |||
|id=chr3:103607044..103607052,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000215,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!5.97e-09!14;UBERON:0003918!5.97e-09!14;UBERON:0005095!5.97e-09!14;UBERON:0007687!5.97e-09!14;UBERON:0003100!8.27e-09!11;UBERON:0006554!1.06e-07!16;UBERON:0001911!3.27e-07!2;UBERON:0000076!3.27e-07!2;UBERON:0005333!3.27e-07!2;UBERON:0008425!3.27e-07!2;UBERON:0005311!3.27e-07!2;UBERON:0001008!3.44e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.23e-36,2;UBERON:0000076,4.23e-36,2;UBERON:0005333,4.23e-36,2;UBERON:0008425,4.23e-36,2;UBERON:0005311,4.23e-36,2;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1;UBERON:0006834,2.59e-18,1;UBERON:0003100,4.28e-15,11;UBERON:0002365,4.23e-07,25;UBERON:0002330,4.23e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0.280543279561274,0.758838445491087,0.885660887877613,0.784993639206874,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.7811124068174,12.417153583713,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm15471 | |||
}} |
Revision as of 01:04, 14 September 2013
Short description: | p1@Gm15471 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15471_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 0bp_to_ENSMUST00000149374, NR_040412, uc008qtn.1_5end |
EntrezGene: | Gm15471 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.74e-18 | 1 |
meso-epithelial cell | 1.74e-18 | 1 |
endothelial cell | 1.74e-18 | 1 |
endothelial cell of sinusoid | 1.74e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.74e-18 | 1 |
barrier cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 4.23e-36 | 2 |
external ectoderm | 4.23e-36 | 2 |
mammary bud | 4.23e-36 | 2 |
mammary ridge | 4.23e-36 | 2 |
mammary placode | 4.23e-36 | 2 |
bile duct | 1.74e-18 | 1 |
hepatic sinusoid | 1.74e-18 | 1 |
parenchyma | 1.74e-18 | 1 |
abdomen blood vessel | 1.74e-18 | 1 |
sinusoid | 1.74e-18 | 1 |
digestive system duct | 1.74e-18 | 1 |
abdominal segment blood vessel | 1.74e-18 | 1 |
trunk blood vessel | 1.74e-18 | 1 |
liver parenchyma | 1.74e-18 | 1 |
liver lobule | 1.74e-18 | 1 |
biliary system | 1.74e-18 | 1 |
biliary tree | 1.74e-18 | 1 |
biliary bud | 1.74e-18 | 1 |
hepatic duct | 1.74e-18 | 1 |
uterus or analog | 2.59e-18 | 1 |
female organism | 4.28e-15 | 11 |
exocrine gland | 4.23e-07 | 25 |
exocrine system | 4.23e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.