FFCP PHASE1:Mm9::chr3:144672785..144672802,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=274|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:144672785..144672802,-|id=chr3:144672785..144672802,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.25e-14!43;UBERON:0005409!2.13e-14!59;UBERON:0000344!1.26e-12!15;UBERON:0000331!1.54e-10!3;UBERON:0002116!1.54e-10!3;UBERON:0001204!1.54e-10!3;UBERON:0001168!1.54e-10!3;UBERON:0001007!1.47e-09!128;UBERON:0001555!1.47e-09!128;UBERON:0007026!1.47e-09!128;UBERON:0004119!2.48e-09!130;UBERON:0000925!2.48e-09!130;UBERON:0006595!2.48e-09!130;UBERON:0001242!1.98e-08!13;UBERON:0000060!1.98e-08!13;UBERON:0001262!1.98e-08!13;UBERON:0004786!1.98e-08!13;UBERON:0004921!1.07e-07!126;UBERON:0004185!1.07e-07!126;UBERON:0004923!2.25e-07!24;UBERON:0001962!2.31e-07!2;UBERON:0001961!2.31e-07!2;UBERON:0001744!2.31e-07!2;UBERON:0001155!5.66e-07!2;UBERON:0000059!5.66e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.77e-24,15;UBERON:0000331,2.82e-23,3;UBERON:0002116,2.82e-23,3;UBERON:0001204,2.82e-23,3;UBERON:0001168,2.82e-23,3;UBERON:0002108,1.24e-17,4;UBERON:0001962,1.35e-15,2;UBERON:0001961,1.35e-15,2;UBERON:0001744,1.35e-15,2;UBERON:0004923,7.55e-15,24;UBERON:0000160,8.33e-15,31;UBERON:0001242,1.56e-14,13;UBERON:0001262,1.56e-14,13;UBERON:0004786,1.56e-14,13;UBERON:0005409,5.01e-12,47;UBERON:0002465,1.02e-10,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0003199,1.05e-08,1;UBERON:0001007,9.52e-07,116;UBERON:0001555,9.52e-07,116;UBERON:0007026,9.52e-07,116|phase1_expression=0,0,0,0,0,2.35030980676646,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.75991665072747,2.2940928106717,0,0.86152399231815,0.646413698057667,7.03086651988583,2.01624103807945,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.988193728344065,0,0.198956472041151,0.19496408711912,0,1.51296634912286,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:144672785..144672802,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=274 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:144672785..144672802,- | |||
|id=chr3:144672785..144672802,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.25e-14!43;UBERON:0005409!2.13e-14!59;UBERON:0000344!1.26e-12!15;UBERON:0000331!1.54e-10!3;UBERON:0002116!1.54e-10!3;UBERON:0001204!1.54e-10!3;UBERON:0001168!1.54e-10!3;UBERON:0001007!1.47e-09!128;UBERON:0001555!1.47e-09!128;UBERON:0007026!1.47e-09!128;UBERON:0004119!2.48e-09!130;UBERON:0000925!2.48e-09!130;UBERON:0006595!2.48e-09!130;UBERON:0001242!1.98e-08!13;UBERON:0000060!1.98e-08!13;UBERON:0001262!1.98e-08!13;UBERON:0004786!1.98e-08!13;UBERON:0004921!1.07e-07!126;UBERON:0004185!1.07e-07!126;UBERON:0004923!2.25e-07!24;UBERON:0001962!2.31e-07!2;UBERON:0001961!2.31e-07!2;UBERON:0001744!2.31e-07!2;UBERON:0001155!5.66e-07!2;UBERON:0000059!5.66e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.77e-24,15;UBERON:0000331,2.82e-23,3;UBERON:0002116,2.82e-23,3;UBERON:0001204,2.82e-23,3;UBERON:0001168,2.82e-23,3;UBERON:0002108,1.24e-17,4;UBERON:0001962,1.35e-15,2;UBERON:0001961,1.35e-15,2;UBERON:0001744,1.35e-15,2;UBERON:0004923,7.55e-15,24;UBERON:0000160,8.33e-15,31;UBERON:0001242,1.56e-14,13;UBERON:0001262,1.56e-14,13;UBERON:0004786,1.56e-14,13;UBERON:0005409,5.01e-12,47;UBERON:0002465,1.02e-10,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0003199,1.05e-08,1;UBERON:0001007,9.52e-07,116;UBERON:0001555,9.52e-07,116;UBERON:0007026,9.52e-07,116 | |||
|phase1_expression=0,0,0,0,0,2.35030980676646,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.75991665072747,2.2940928106717,0,0.86152399231815,0.646413698057667,7.03086651988583,2.01624103807945,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.988193728344065,0,0.198956472041151,0.19496408711912,0,1.51296634912286,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:144672785..144672802,- | |||
}} |
Revision as of 01:44, 14 September 2013
Short description: | p@chr3:144672785..144672802, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:144672785..144672802, - |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 5.77e-24 | 15 |
ileal mucosa | 2.82e-23 | 3 |
ileum | 2.82e-23 | 3 |
mucosa of small intestine | 2.82e-23 | 3 |
wall of small intestine | 2.82e-23 | 3 |
small intestine | 1.24e-17 | 4 |
gut-associated lymphoid tissue | 1.35e-15 | 2 |
mucosa-associated lymphoid tissue | 1.35e-15 | 2 |
lymphoid tissue | 1.35e-15 | 2 |
organ component layer | 7.55e-15 | 24 |
intestine | 8.33e-15 | 31 |
intestinal mucosa | 1.56e-14 | 13 |
wall of intestine | 1.56e-14 | 13 |
gastrointestinal system mucosa | 1.56e-14 | 13 |
gastrointestinal system | 5.01e-12 | 47 |
lymphoid system | 1.02e-10 | 3 |
caecum | 5.23e-09 | 1 |
midgut | 5.23e-09 | 1 |
egg chamber | 1.05e-08 | 1 |
digestive system | 9.52e-07 | 116 |
digestive tract | 9.52e-07 | 116 |
primitive gut | 9.52e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.