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FFCP PHASE1:Mm9::chr3:39258078..39258082,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=-251bp_to_ENSMUST00000056409_5end|description=CAGE_peak_1_at_ENSMUST00000056409_5end|id=chr3:39258078..39258082,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.00e-15!130;UBERON:0000925!7.00e-15!130;UBERON:0006595!7.00e-15!130;UBERON:0001007!8.01e-15!128;UBERON:0001555!8.01e-15!128;UBERON:0007026!8.01e-15!128;UBERON:0004921!2.27e-14!126;UBERON:0004185!2.27e-14!126;UBERON:0003104!6.04e-12!131;UBERON:0009142!6.04e-12!131;UBERON:0001041!1.55e-11!92;UBERON:0000077!3.53e-11!97;UBERON:0005911!4.55e-09!69;UBERON:0002365!6.47e-09!25;UBERON:0002330!6.47e-09!25;UBERON:0000490!8.89e-09!66;UBERON:0003929!2.26e-08!55;UBERON:0005057!2.51e-08!51;UBERON:0000926!4.08e-08!193;UBERON:0004120!4.08e-08!193;UBERON:0006603!4.08e-08!193;UBERON:0000466!5.47e-08!79;UBERON:0002107!1.55e-07!22;UBERON:0007499!1.55e-07!22;UBERON:0006925!1.55e-07!22;UBERON:0009497!1.55e-07!22;UBERON:0000015!1.55e-07!22;UBERON:0002423!1.55e-07!22;UBERON:0006235!1.55e-07!22;UBERON:0008835!1.55e-07!22;UBERON:0003894!1.55e-07!22;UBERON:0004161!1.55e-07!22;UBERON:0008836!1.55e-07!22;UBERON:0002100!1.80e-07!98;UBERON:0000949!1.81e-07!72;UBERON:0009569!2.11e-07!66;UBERON:0002530!2.91e-07!65;UBERON:0005172!6.20e-07!49;UBERON:0005173!6.20e-07!49;UBERON:0002417!6.20e-07!49;UBERON:0000916!6.20e-07!49;UBERON:0009854!8.98e-07!23;UBERON:0009856!8.98e-07!23;UBERON:0005177!9.43e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.02e-20,25;UBERON:0002330,8.02e-20,25;UBERON:0002107,4.03e-17,22;UBERON:0007499,4.03e-17,22;UBERON:0006925,4.03e-17,22;UBERON:0009497,4.03e-17,22;UBERON:0000015,4.03e-17,22;UBERON:0002423,4.03e-17,22;UBERON:0006235,4.03e-17,22;UBERON:0008835,4.03e-17,22;UBERON:0003894,4.03e-17,22;UBERON:0004161,4.03e-17,22;UBERON:0008836,4.03e-17,22;UBERON:0009854,3.06e-16,23;UBERON:0009856,3.06e-16,23;UBERON:0005256,8.03e-11,45;UBERON:0000949,2.99e-10,72;UBERON:0002100,3.73e-10,90;UBERON:0003929,2.43e-09,55;UBERON:0000490,3.02e-09,66;UBERON:0005177,8.08e-09,79;UBERON:0003914,9.48e-09,47;UBERON:0002530,2.15e-08,65;UBERON:0003104,4.75e-08,61;UBERON:0009142,4.75e-08,61;UBERON:0005911,1.46e-07,69;UBERON:0005172,5.13e-07,49;UBERON:0005173,5.13e-07,49;UBERON:0002417,5.13e-07,49;UBERON:0000916,5.13e-07,49|phase1_expression=0.320297694209588,1.74487703819681,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.645616617207881,0.140788722151667,0,0.34243593645101,0.159544317990673,0.513602189793617,1.13646523144697,0,0,0,0.788655413395594,0.411343300817216,0,0.680346321208558,0.496454756004426,0,0.799962113967033,0.22940928106717,1.14846392823004,0,0.646413698057667,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.25896817975577,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,11.185510400758,0,7.55584468292944,5.84798775702902,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.03575153458869,0.445326417194474,0,0,0,0.60289056221049,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,1.45462575940567,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.373220911830279,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,1.89811624617805,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,6.81841042300442,0.166845105716094,0.589676985339609,0.899448449539415,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.324270453550071,1.64736847912849,2.87536413054709,2.97712758134803,2.18426371180192,5.80931419278357,4.84373016509163,2.41221760681684,1.10851914099963,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0,0.195133647857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|EntrezGene=
|HGNC=
|MCL_coexpression_id=8
|UniProt=
|association_with_transcript=-251bp_to_ENSMUST00000056409_5end
|description=CAGE_peak_1_at_ENSMUST00000056409_5end
|id=chr3:39258078..39258082,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.00e-15!130;UBERON:0000925!7.00e-15!130;UBERON:0006595!7.00e-15!130;UBERON:0001007!8.01e-15!128;UBERON:0001555!8.01e-15!128;UBERON:0007026!8.01e-15!128;UBERON:0004921!2.27e-14!126;UBERON:0004185!2.27e-14!126;UBERON:0003104!6.04e-12!131;UBERON:0009142!6.04e-12!131;UBERON:0001041!1.55e-11!92;UBERON:0000077!3.53e-11!97;UBERON:0005911!4.55e-09!69;UBERON:0002365!6.47e-09!25;UBERON:0002330!6.47e-09!25;UBERON:0000490!8.89e-09!66;UBERON:0003929!2.26e-08!55;UBERON:0005057!2.51e-08!51;UBERON:0000926!4.08e-08!193;UBERON:0004120!4.08e-08!193;UBERON:0006603!4.08e-08!193;UBERON:0000466!5.47e-08!79;UBERON:0002107!1.55e-07!22;UBERON:0007499!1.55e-07!22;UBERON:0006925!1.55e-07!22;UBERON:0009497!1.55e-07!22;UBERON:0000015!1.55e-07!22;UBERON:0002423!1.55e-07!22;UBERON:0006235!1.55e-07!22;UBERON:0008835!1.55e-07!22;UBERON:0003894!1.55e-07!22;UBERON:0004161!1.55e-07!22;UBERON:0008836!1.55e-07!22;UBERON:0002100!1.80e-07!98;UBERON:0000949!1.81e-07!72;UBERON:0009569!2.11e-07!66;UBERON:0002530!2.91e-07!65;UBERON:0005172!6.20e-07!49;UBERON:0005173!6.20e-07!49;UBERON:0002417!6.20e-07!49;UBERON:0000916!6.20e-07!49;UBERON:0009854!8.98e-07!23;UBERON:0009856!8.98e-07!23;UBERON:0005177!9.43e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.02e-20,25;UBERON:0002330,8.02e-20,25;UBERON:0002107,4.03e-17,22;UBERON:0007499,4.03e-17,22;UBERON:0006925,4.03e-17,22;UBERON:0009497,4.03e-17,22;UBERON:0000015,4.03e-17,22;UBERON:0002423,4.03e-17,22;UBERON:0006235,4.03e-17,22;UBERON:0008835,4.03e-17,22;UBERON:0003894,4.03e-17,22;UBERON:0004161,4.03e-17,22;UBERON:0008836,4.03e-17,22;UBERON:0009854,3.06e-16,23;UBERON:0009856,3.06e-16,23;UBERON:0005256,8.03e-11,45;UBERON:0000949,2.99e-10,72;UBERON:0002100,3.73e-10,90;UBERON:0003929,2.43e-09,55;UBERON:0000490,3.02e-09,66;UBERON:0005177,8.08e-09,79;UBERON:0003914,9.48e-09,47;UBERON:0002530,2.15e-08,65;UBERON:0003104,4.75e-08,61;UBERON:0009142,4.75e-08,61;UBERON:0005911,1.46e-07,69;UBERON:0005172,5.13e-07,49;UBERON:0005173,5.13e-07,49;UBERON:0002417,5.13e-07,49;UBERON:0000916,5.13e-07,49
|phase1_expression=0.320297694209588,1.74487703819681,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.645616617207881,0.140788722151667,0,0.34243593645101,0.159544317990673,0.513602189793617,1.13646523144697,0,0,0,0.788655413395594,0.411343300817216,0,0.680346321208558,0.496454756004426,0,0.799962113967033,0.22940928106717,1.14846392823004,0,0.646413698057667,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.25896817975577,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,11.185510400758,0,7.55584468292944,5.84798775702902,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.03575153458869,0.445326417194474,0,0,0,0.60289056221049,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0,1.45462575940567,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.373220911830279,0.505445516867349,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,1.89811624617805,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,1.1948476395262,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,6.81841042300442,0.166845105716094,0.589676985339609,0.899448449539415,0.202860121388503,0.241177159752417,1.2731292589071,0.287696137450811,0.324270453550071,1.64736847912849,2.87536413054709,2.97712758134803,2.18426371180192,5.80931419278357,4.84373016509163,2.41221760681684,1.10851914099963,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0,0.195133647857799,0.945810864637146,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,1.37968373152366,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.99358059645788,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0,0.906970670894253,1.69744571780308,0,0.614870295887855,0.258428293168221,1.09060118843252,0,1.8962205476149,1.05418608574999,3.09406629744561,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0,1.27099242518292,3.52845436887939,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,0,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.743881101528023,0.26175594198403,0.259229946583586,3.10669656543463,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,1.58005560314089,0.405450430580328,0.616265742988964,0.51968329191118,0.179026695667481,0.79472541912506,0.480781798079875,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.584747284438515,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0,0.563047426353546,0.549454872801795,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0
|short_description=p1@ENSMUST00000056409
}}

Revision as of 02:12, 14 September 2013

Short description:p1@ENSMUST00000056409
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_ENSMUST00000056409_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -251bp_to_ENSMUST00000056409_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@ENSMUST00000056409

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland8.02e-2025
exocrine system8.02e-2025
liver4.03e-1722
epithelial sac4.03e-1722
digestive gland4.03e-1722
epithelium of foregut-midgut junction4.03e-1722
anatomical boundary4.03e-1722
hepatobiliary system4.03e-1722
foregut-midgut junction4.03e-1722
hepatic diverticulum4.03e-1722
liver primordium4.03e-1722
septum transversum4.03e-1722
liver bud4.03e-1722
digestive tract diverticulum3.06e-1623
sac3.06e-1623
trunk mesenchyme8.03e-1145
endocrine system2.99e-1072
trunk3.73e-1090
gut epithelium2.43e-0955
unilaminar epithelium3.02e-0966
trunk region element8.08e-0979
epithelial tube9.48e-0947
gland2.15e-0865
mesenchyme4.75e-0861
entire embryonic mesenchyme4.75e-0861
endo-epithelium1.46e-0769
abdomen element5.13e-0749
abdominal segment element5.13e-0749
abdominal segment of trunk5.13e-0749
abdomen5.13e-0749







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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