FFCP PHASE1:Mm9::chr3:90417441..90417458,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:90417441..90417458,+|id=chr3:90417441..90417458,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.82e-12,3;CL:0002202,2.82e-12,3;CL:0000069,2.82e-12,3;CL:0002632,2.82e-12,3;CL:0002368,2.82e-12,3;CL:0000307,2.82e-12,3;CL:0000377,2.82e-12,3;CL:0000128,1.37e-09,6;CL:0000126,1.37e-09,6;CL:0000127,1.37e-09,6;CL:0000333,1.17e-08,10;CL:0000095,1.17e-08,10;CL:0000243,1.17e-08,10;CL:0000123,1.17e-08,10;CL:0000125,1.17e-08,10;CL:0000030,1.17e-08,10;CL:0000339,1.17e-08,10;CL:0002605,5.98e-08,2;CL:0002604,5.98e-08,2;CL:0002453,3.31e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.82e-12,3;UBERON:0001005,2.82e-12,3;UBERON:0007196,2.82e-12,3;UBERON:0001558,2.82e-12,3|phase1_expression=0,0,0,0.30246421130683,0,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.799962113967033,0.45881856213434,0,0.86152399231815,0,0.190023419456374,0,2.43903561720835,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,1.51076181570693,0.506884656097573,0.734187008646726,1.56478268869608,0.436050312760893,1.5378032791413,3.30530828426282,3.49966054063406,0,0,0,0,3.08711323243136,0.286533439938757,2.06268836910977,0,0,0,4.40497891689872,0.889294796111139,1.7997994345628,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42323818666189,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.779358013808606,0,0,0,0,0,6.061749148314,5.32055717497707,7.58286667522175,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,1.97755974187499,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0.327869890753351,0,0,0.390438744296638,0,0,0,0,1.21443210502468,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.81606049676452,0,0,0.65954501176592,0.161464426695906,0.482503399425247,0.716234064018819,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0.228778173206523,0.679913719975421,0.419854356970974,1.10559979043539,3.81868247206045,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.944050424693745,0.909188012978695,1.57053565190418,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0.503653849092235,1.9318959403219,0.563047426353546,0.183151624267265,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr3:90417441..90417458,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:90417441..90417458,+ | |||
|id=chr3:90417441..90417458,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.82e-12,3;CL:0002202,2.82e-12,3;CL:0000069,2.82e-12,3;CL:0002632,2.82e-12,3;CL:0002368,2.82e-12,3;CL:0000307,2.82e-12,3;CL:0000377,2.82e-12,3;CL:0000128,1.37e-09,6;CL:0000126,1.37e-09,6;CL:0000127,1.37e-09,6;CL:0000333,1.17e-08,10;CL:0000095,1.17e-08,10;CL:0000243,1.17e-08,10;CL:0000123,1.17e-08,10;CL:0000125,1.17e-08,10;CL:0000030,1.17e-08,10;CL:0000339,1.17e-08,10;CL:0002605,5.98e-08,2;CL:0002604,5.98e-08,2;CL:0002453,3.31e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.82e-12,3;UBERON:0001005,2.82e-12,3;UBERON:0007196,2.82e-12,3;UBERON:0001558,2.82e-12,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.799962113967033,0.45881856213434,0,0.86152399231815,0,0.190023419456374,0,2.43903561720835,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,1.51076181570693,0.506884656097573,0.734187008646726,1.56478268869608,0.436050312760893,1.5378032791413,3.30530828426282,3.49966054063406,0,0,0,0,3.08711323243136,0.286533439938757,2.06268836910977,0,0,0,4.40497891689872,0.889294796111139,1.7997994345628,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42323818666189,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.779358013808606,0,0,0,0,0,6.061749148314,5.32055717497707,7.58286667522175,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,1.97755974187499,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0.327869890753351,0,0,0.390438744296638,0,0,0,0,1.21443210502468,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.81606049676452,0,0,0.65954501176592,0.161464426695906,0.482503399425247,0.716234064018819,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0.228778173206523,0.679913719975421,0.419854356970974,1.10559979043539,3.81868247206045,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.944050424693745,0.909188012978695,1.57053565190418,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0.503653849092235,1.9318959403219,0.563047426353546,0.183151624267265,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr3:90417441..90417458,+ | |||
}} |
Revision as of 02:55, 14 September 2013
Short description: | p@chr3:90417441..90417458, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:90417441..90417458, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.82e-12 | 3 |
epithelial cell of tracheobronchial tree | 2.82e-12 | 3 |
branched duct epithelial cell | 2.82e-12 | 3 |
epithelial cell of lower respiratory tract | 2.82e-12 | 3 |
respiratory epithelial cell | 2.82e-12 | 3 |
tracheal epithelial cell | 2.82e-12 | 3 |
tracheoblast | 2.82e-12 | 3 |
oligodendrocyte | 1.37e-09 | 6 |
macroglial cell | 1.37e-09 | 6 |
astrocyte | 1.37e-09 | 6 |
migratory neural crest cell | 1.17e-08 | 10 |
neuron associated cell | 1.17e-08 | 10 |
glial cell (sensu Vertebrata) | 1.17e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-08 | 10 |
glial cell | 1.17e-08 | 10 |
glioblast | 1.17e-08 | 10 |
glioblast (sensu Vertebrata) | 1.17e-08 | 10 |
astrocyte of the cerebral cortex | 5.98e-08 | 2 |
astrocyte of the hippocampus | 5.98e-08 | 2 |
oligodendrocyte precursor cell | 3.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.82e-12 | 3 |
respiratory airway | 2.82e-12 | 3 |
tracheobronchial tree | 2.82e-12 | 3 |
lower respiratory tract | 2.82e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.