FFCP PHASE1:Hg19::chr8:104310711..104310731,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8323|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4044|TSSclassifier=S|UniProt=|association_with_transcript=44bp_to_uc003ylh.2_5end|description=CAGE_peak_4_at_FZD6_5end|id=chr8:104310711..104310731,+|ontology_enrichment_celltype=CL:0000055!2.37e-19!180;CL:0000057!5.34e-13!75;CL:0000192!4.40e-08!42;CL:0000514!4.40e-08!42;CL:0002334!9.21e-08!12;CL:0000680!4.12e-07!57;CL:0000056!4.12e-07!57;CL:0000355!4.12e-07!57|ontology_enrichment_celltype_v019=CL:0002620;8.36e-14;23!CL:0002617;6.20e-08;2!CL:0002539;6.26e-08;10!CL:0000062;6.53e-08;9|ontology_enrichment_celltype_v019_2=CL:0002620,1.33e-13,23;CL:0000057,2.36e-13,76;CL:0002617,6.07e-08,2;CL:0002539,7.06e-08,10;CL:0000136,2.46e-07,15;CL:0000048,5.17e-07,427;CL:0000723,9.34e-07,433|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;7.03e-10;5!DOID:450;7.03e-10;5!DOID:66;7.03e-10;5!DOID:423;7.03e-10;5!DOID:0080000;7.03e-10;5!DOID:11722;7.03e-10;5|ontology_enrichment_disease_v019_2=DOID:17,1.10e-09,5;DOID:450,1.10e-09,5;DOID:66,1.10e-09,5;DOID:423,1.10e-09,5;DOID:0080000,1.10e-09,5;DOID:11722,1.10e-09,5|ontology_enrichment_uberon=UBERON:0002049!4.22e-08!79;UBERON:0007798!4.22e-08!79;UBERON:0001134!5.92e-07!61;UBERON:0002036!5.92e-07!61;UBERON:0003082!5.92e-07!61;UBERON:0002385!7.27e-07!63;UBERON:0001015!7.27e-07!63;UBERON:0000383!7.27e-07!63|ontology_enrichment_uberon_v019=UBERON:0003688;1.36e-08;6!UBERON:0002358;1.36e-08;6!UBERON:0003684;1.36e-08;6!UBERON:0001178;1.36e-08;6!UBERON:0004237;6.26e-08;10!UBERON:0004695;6.26e-08;10!UBERON:0002111;6.26e-08;10!UBERON:0004178;6.26e-08;10!UBERON:0005406;8.56e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.63e-09,6;UBERON:0002358,8.63e-09,6;UBERON:0003684,8.63e-09,6;UBERON:0001178,8.63e-09,6;UBERON:0002097,4.58e-08,41;UBERON:0004237,7.06e-08,10;UBERON:0004695,7.06e-08,10;UBERON:0002111,7.06e-08,10;UBERON:0004178,7.06e-08,10;UBERON:0005406,4.88e-07,2;UBERON:0002199,6.45e-07,46;UBERON:0002416,6.45e-07,46|phase1_expression=3.08853244759946,3.63970890614671,2.81908808191942,3.00219895059391,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0.283604451492204,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,1.29208379584664,0.71153252537342,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.886413581652058,1.45650098894541,1.43418310374407,0.354668382198357,0,0,0.74000264525148,0.622422070799533,0.67355336034844,1.14423332179421,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0,1.31693286264251,0.919463387397059,0.751190294532984,0.340296549480063,0.717558542755448,1.2813443329114,1.27159140695737,2.40072876867522,1.23663035086127,0.772921620136887,1.11670113798954,2.53164498361899,1.85130309806277,1.26216887122057,2.30124746605748,0.323292113637624,3.19508633264953,1.20902517873168,0.508681776931463,0,0,0,0,0.265059536642971,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,2.78620756819187,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,1.52631302506568,0,0,0.951270761172991,0,0,0,0,0,1.87467667973554,0.16798212819886,0,0,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0.1466765716419,1.80980402060889,0,0,0.531876233169741,1.04007436911366,0,0,0,0.57191197463259,0,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.399891964728228,0,0,0,0.718874566474748,0,0,1.59259437334337,0.410952645100767,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.788512075169673,0.35142424497814,1.80567659836631,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,2.48107807818777,2.455391572609,0.841980283299221,1.66580894032411,1.53512174720011,0.482561763430822,1.48418066444991,0.154209693802656,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0,0,0.276242966807689,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,1.007264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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4044 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=44bp_to_uc003ylh.2_5end | |||
|description=CAGE_peak_4_at_FZD6_5end | |||
|id=chr8:104310711..104310731,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.37e-19!180;CL:0000057!5.34e-13!75;CL:0000192!4.40e-08!42;CL:0000514!4.40e-08!42;CL:0002334!9.21e-08!12;CL:0000680!4.12e-07!57;CL:0000056!4.12e-07!57;CL:0000355!4.12e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.36e-14;23!CL:0002617;6.20e-08;2!CL:0002539;6.26e-08;10!CL:0000062;6.53e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.33e-13,23;CL:0000057,2.36e-13,76;CL:0002617,6.07e-08,2;CL:0002539,7.06e-08,10;CL:0000136,2.46e-07,15;CL:0000048,5.17e-07,427;CL:0000723,9.34e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.03e-10;5!DOID:450;7.03e-10;5!DOID:66;7.03e-10;5!DOID:423;7.03e-10;5!DOID:0080000;7.03e-10;5!DOID:11722;7.03e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.10e-09,5;DOID:450,1.10e-09,5;DOID:66,1.10e-09,5;DOID:423,1.10e-09,5;DOID:0080000,1.10e-09,5;DOID:11722,1.10e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.22e-08!79;UBERON:0007798!4.22e-08!79;UBERON:0001134!5.92e-07!61;UBERON:0002036!5.92e-07!61;UBERON:0003082!5.92e-07!61;UBERON:0002385!7.27e-07!63;UBERON:0001015!7.27e-07!63;UBERON:0000383!7.27e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.36e-08;6!UBERON:0002358;1.36e-08;6!UBERON:0003684;1.36e-08;6!UBERON:0001178;1.36e-08;6!UBERON:0004237;6.26e-08;10!UBERON:0004695;6.26e-08;10!UBERON:0002111;6.26e-08;10!UBERON:0004178;6.26e-08;10!UBERON:0005406;8.56e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.63e-09,6;UBERON:0002358,8.63e-09,6;UBERON:0003684,8.63e-09,6;UBERON:0001178,8.63e-09,6;UBERON:0002097,4.58e-08,41;UBERON:0004237,7.06e-08,10;UBERON:0004695,7.06e-08,10;UBERON:0002111,7.06e-08,10;UBERON:0004178,7.06e-08,10;UBERON:0005406,4.88e-07,2;UBERON:0002199,6.45e-07,46;UBERON:0002416,6.45e-07,46 | |||
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| |||
|short_description=p4@FZD6 | |||
}} |
Revision as of 02:59, 14 September 2013
Short description: | p4@FZD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FZD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_uc003ylh.2_5end |
EntrezGene: | FZD6 |
HGNC: | 4044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.33e-13 | 23 |
fibroblast | 2.36e-13 | 76 |
adipocyte of breast | 6.07e-08 | 2 |
aortic smooth muscle cell | 7.06e-08 | 10 |
fat cell | 2.46e-07 | 15 |
multi fate stem cell | 5.17e-07 | 427 |
somatic stem cell | 9.34e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.63e-09 | 6 |
peritoneum | 8.63e-09 | 6 |
abdominal cavity | 8.63e-09 | 6 |
visceral peritoneum | 8.63e-09 | 6 |
skin of body | 4.58e-08 | 41 |
blood vessel smooth muscle | 7.06e-08 | 10 |
arterial system smooth muscle | 7.06e-08 | 10 |
artery smooth muscle tissue | 7.06e-08 | 10 |
aorta smooth muscle tissue | 7.06e-08 | 10 |
perirenal fat | 4.88e-07 | 2 |
integument | 6.45e-07 | 46 |
integumental system | 6.45e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.10e-09 | 5 |
myotonic disease | 1.10e-09 | 5 |
muscle tissue disease | 1.10e-09 | 5 |
myopathy | 1.10e-09 | 5 |
muscular disease | 1.10e-09 | 5 |
myotonic dystrophy | 1.10e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.