FFCP PHASE1:Mm9::chr4:117507883..117507906,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14664|HGNC=|MCL_coexpression_id=15|UniProt=P28571|association_with_transcript=20bp_to_NM_008135,uc008uiy.1_5end|description=CAGE_peak_3_at_Slc6a9_5end|id=chr4:117507883..117507906,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003886!1.36e-10!38;UBERON:0002323!1.87e-10!37;UBERON:0004458!1.87e-10!37;UBERON:0002553!1.03e-09!39;UBERON:0002075!1.07e-09!19;UBERON:0005177!2.88e-09!85;UBERON:0000466!5.57e-09!79;UBERON:0002100!1.44e-07!98;UBERON:0000464!5.88e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0003886,1.22e-11,38;UBERON:0002323,1.78e-11,37;UBERON:0004458,1.78e-11,37;UBERON:0002553,5.50e-11,39;UBERON:0002075,1.54e-10,19|phase1_expression=1.76163731815273,0,0,0.90739263392049,0,1.84667199103079,1.86890112476421,0,0,0.468129052643987,2.39705155515707,0.957265907944037,0,0,23.3176833270964,55.2757479974225,76.252244715968,0,0,0.84877930359606,0.850432901510698,0.893618560807968,0.261199789138935,0.799962113967033,0.45881856213434,1.14846392823004,1.7230479846363,0.646413698057667,0.760093677825496,0.252030129759931,0.886922042621219,6.98533740805594,12.3012957516914,0,0,0,0,0.837063261473815,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.608261587317087,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,0.388859798148567,0.139986421625363,2.87505128729943,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,9.71213346972932,5.52171352379034,0.367472397644862,0.0958454710182364,0,5.50579404996943,5.49055553766307,4.30098293117482,0.263772575460388,0.274462930807229,0,7.53794097303729,2.8138130501584,4.12555268997387,5.30331453852602,4.55589378557129,2.23679334990361,0.530083353332288,0.529000920747499,0.289864488701678,0,0.679971333707751,0.539703191637817,1.94932925234301,0.896053774194671,2.10666630197628,0.852151612890289,0.779358013808606,1.41335829804136,0.563373679106722,0,0,0,1.73192832808971,1.01343946190039,1.51657333504435,1.94112595522402,0,1.03909497345377,1.73485326766136,4.26251669636998,3.68984795609694,0.904335843315735,1.99900802130698,1.0053327306374,0.741584903203122,0.578397427679647,11.4999371753484,2.75003644910596,15.6797478106879,13.5765070877862,0,3.80615036115011,3.14170060220183,0.766371165625774,0.11981512450592,0,0,2.39665023047716,1.37250180845588,1.13088916901578,0.347648640384553,0.511430914660661,4.57133698031032,2.10913641988085,1.01839363850316,12.3162900903992,2.0217820674694,1.68353484709179,0.780722657776222,0.459804208866946,0.720248519221397,2.71268672104287,2.24520447199382,3.20284300712124,5.15359485078509,2.32833033665114,1.5089759505299,2.08016688184601,1.05570674498369,0.876782929710299,1.66828349535359,1.39300866608867,0.411564272815887,1.79130840136644,0,0,0,4.14251545071004,3.75241695969754,0.720248245844059,0.946978942340841,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0,0.329119699826961,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,0.420579897128254,0.823236899034275,0.991256348951394,0.528901133327089,1.06644125267617,1.85789337488351,0.644337306610467,0.605050573870028,0.444756087689741,1.52180500890047,0,0.658795818896044,0.754005626400808,0.795825888164603,1.36474860983384,0.898819408654221,0.864552199498777,0.597423819763102,0.379335801906163,1.02823661348756,0,0.814605311381257,0.969762435838129,0.771494018793504,0.948548056863859,0.442830443938806,0.941992367048249,0.987177311374404,0.889357881261447,26.1946815974268,26.142346350056,32.1552820710341,39.1520034279811,37.8648140811294,30.8097280655518,16.686375972147,10.5387897403773,10.158772287959,1.43768206527355,2.97712758134803,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.554259570499814,1.32643988239339,1.14075483509418,0.339490171550376,0.704070744865506,0.837531287209079,0.952174563544055,2.14647012643579,1.26108115284953,0,0.797273843287435,0.81931657357869,0.863424909329478,1.44649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,8.18808008937739,11.9555920324047,2.78689407140348,2.01976741763498,0.315508219416257,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,5.78378369559253,1.70328102249922,2.13678724400706,1.79175655288934,1.15479086080775,11.9470624505967,1.94224508923985,0.906970670894253,3.01768127609437,6.496641643377,10.1453598821496,4.65170927702798,3.63533729477506,4.63446591900138,7.58488219045958,10.5418608574999,13.4076206222643,0,0.720244376125241,1.29358683782755,0.643011105094777,1.06404140185364,1.42695054081656,0.822745103010605,1.8267896946876,0.469343416127421,0,1.54369878638473,0.98931751764888,0.968786560175433,0.904693873922338,0.954978752025092,0.4924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| ||
|EntrezGene=14664 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=P28571 | |||
|association_with_transcript=20bp_to_NM_008135,uc008uiy.1_5end | |||
|description=CAGE_peak_3_at_Slc6a9_5end | |||
|id=chr4:117507883..117507906,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003886!1.36e-10!38;UBERON:0002323!1.87e-10!37;UBERON:0004458!1.87e-10!37;UBERON:0002553!1.03e-09!39;UBERON:0002075!1.07e-09!19;UBERON:0005177!2.88e-09!85;UBERON:0000466!5.57e-09!79;UBERON:0002100!1.44e-07!98;UBERON:0000464!5.88e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,1.22e-11,38;UBERON:0002323,1.78e-11,37;UBERON:0004458,1.78e-11,37;UBERON:0002553,5.50e-11,39;UBERON:0002075,1.54e-10,19 | |||
|phase1_expression=1.76163731815273,0,0,0.90739263392049,0,1.84667199103079,1.86890112476421,0,0,0.468129052643987,2.39705155515707,0.957265907944037,0,0,23.3176833270964,55.2757479974225,76.252244715968,0,0,0.84877930359606,0.850432901510698,0.893618560807968,0.261199789138935,0.799962113967033,0.45881856213434,1.14846392823004,1.7230479846363,0.646413698057667,0.760093677825496,0.252030129759931,0.886922042621219,6.98533740805594,12.3012957516914,0,0,0,0,0.837063261473815,0.7813353445238,0,0,0,0.485510353031154,0.377690453926732,0.608261587317087,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,0.388859798148567,0.139986421625363,2.87505128729943,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,9.71213346972932,5.52171352379034,0.367472397644862,0.0958454710182364,0,5.50579404996943,5.49055553766307,4.30098293117482,0.263772575460388,0.274462930807229,0,7.53794097303729,2.8138130501584,4.12555268997387,5.30331453852602,4.55589378557129,2.23679334990361,0.530083353332288,0.529000920747499,0.289864488701678,0,0.679971333707751,0.539703191637817,1.94932925234301,0.896053774194671,2.10666630197628,0.852151612890289,0.779358013808606,1.41335829804136,0.563373679106722,0,0,0,1.73192832808971,1.01343946190039,1.51657333504435,1.94112595522402,0,1.03909497345377,1.73485326766136,4.26251669636998,3.68984795609694,0.904335843315735,1.99900802130698,1.0053327306374,0.741584903203122,0.578397427679647,11.4999371753484,2.75003644910596,15.6797478106879,13.5765070877862,0,3.80615036115011,3.14170060220183,0.766371165625774,0.11981512450592,0,0,2.39665023047716,1.37250180845588,1.13088916901578,0.347648640384553,0.511430914660661,4.57133698031032,2.10913641988085,1.01839363850316,12.3162900903992,2.0217820674694,1.68353484709179,0.780722657776222,0.459804208866946,0.720248519221397,2.71268672104287,2.24520447199382,3.20284300712124,5.15359485078509,2.32833033665114,1.5089759505299,2.08016688184601,1.05570674498369,0.876782929710299,1.66828349535359,1.39300866608867,0.411564272815887,1.79130840136644,0,0,0,4.14251545071004,3.75241695969754,0.720248245844059,0.946978942340841,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0,0.329119699826961,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,0.420579897128254,0.823236899034275,0.991256348951394,0.528901133327089,1.06644125267617,1.85789337488351,0.644337306610467,0.605050573870028,0.444756087689741,1.52180500890047,0,0.658795818896044,0.754005626400808,0.795825888164603,1.36474860983384,0.898819408654221,0.864552199498777,0.597423819763102,0.379335801906163,1.02823661348756,0,0.814605311381257,0.969762435838129,0.771494018793504,0.948548056863859,0.442830443938806,0.941992367048249,0.987177311374404,0.889357881261447,26.1946815974268,26.142346350056,32.1552820710341,39.1520034279811,37.8648140811294,30.8097280655518,16.686375972147,10.5387897403773,10.158772287959,1.43768206527355,2.97712758134803,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.554259570499814,1.32643988239339,1.14075483509418,0.339490171550376,0.704070744865506,0.837531287209079,0.952174563544055,2.14647012643579,1.26108115284953,0,0.797273843287435,0.81931657357869,0.863424909329478,1.44649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,8.18808008937739,11.9555920324047,2.78689407140348,2.01976741763498,0.315508219416257,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,5.78378369559253,1.70328102249922,2.13678724400706,1.79175655288934,1.15479086080775,11.9470624505967,1.94224508923985,0.906970670894253,3.01768127609437,6.496641643377,10.1453598821496,4.65170927702798,3.63533729477506,4.63446591900138,7.58488219045958,10.5418608574999,13.4076206222643,0,0.720244376125241,1.29358683782755,0.643011105094777,1.06404140185364,1.42695054081656,0.822745103010605,1.8267896946876,0.469343416127421,0,1.54369878638473,0.98931751764888,0.968786560175433,0.904693873922338,0.954978752025092,0.492422699235184,1.1659233465194,13.3506217447567,22.8966980269123,5.15967169908056,10.7412825874433,35.4132699168819,31.5763666035568,35.9181731934241,0,0.139951452323658,0.276399947608848,1.90934123603023,1.89801596148681,1.82987520414164,0.86404272657441,2.92723614420256,3.27543845619266,3.37160865962052,2.97552440611209,1.57053565190418,0.90730481304255,0,0,2.99033092087958,3.97100377097034,3.50012139019286,3.61647505737647,3.8859908862879,4.10750335260139,3.3853140059427,1.78260885523708,0.483168241652012,0.864090018773596,0.316011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.680191150845634,0.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| |||
|short_description=p3@Slc6a9 | |||
}} |
Revision as of 03:34, 14 September 2013
Short description: | p3@Slc6a9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a9_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 20bp_to_NM_008135, uc008uiy.1_5end |
EntrezGene: | Slc6a9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 1.22e-11 | 38 |
body cavity | 1.78e-11 | 37 |
body cavity or lining | 1.78e-11 | 37 |
anatomical cavity | 5.50e-11 | 39 |
viscus | 1.54e-10 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.