FFCP PHASE1:Hg19::chr8:133894129..133894154,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7038|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11764|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000520769_5end|coexpression_cluster_id=C30|description=CAGE_peak_3_at_TG_5end|id=chr8:133894129..133894154,+|ontology_enrichment_celltype=CL:0002623!1.33e-17!3;CL:0002251!1.07e-11!21;CL:0000622!9.37e-11!5;CL:0000154!4.93e-09!6;CL:0002076!8.86e-07!43|ontology_enrichment_celltype_v019=CL:0002623;2.13e-44;3!CL:0000622;3.80e-27;5!CL:0000154;8.01e-23;6!CL:0000150;1.36e-15;9!CL:0002251;1.45e-07;20|ontology_enrichment_celltype_v019_2=CL:0002623,2.38e-44,3;CL:0000622,4.06e-27,5;CL:0000154,8.47e-23,6;CL:0000150,1.41e-15,9;CL:0002251,1.47e-07,20|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5|ontology_enrichment_disease=DOID:1749!5.40e-13!14;DOID:3151!5.75e-07!1;DOID:3149!5.75e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000166!2.36e-15!21;UBERON:0001044!3.11e-15!6;UBERON:0003293!3.11e-15!6;UBERON:0003294!3.11e-15!6;UBERON:0010047!3.11e-15!6;UBERON:0000167!3.11e-15!6;UBERON:0000161!1.63e-13!35;UBERON:0000974!2.09e-13!10;UBERON:0003343!2.02e-12!4;UBERON:0004785!2.02e-12!4;UBERON:0000341!2.04e-12!2;UBERON:0003127!2.35e-11!2;UBERON:0000165!3.32e-11!28;UBERON:0000930!3.32e-11!28;UBERON:0000078!2.18e-10!18;UBERON:0003729!4.91e-10!5;UBERON:0001007!2.95e-09!155;UBERON:0001555!2.95e-09!155;UBERON:0007026!2.95e-09!155;UBERON:0004119!3.37e-09!169;UBERON:0000925!3.37e-09!169;UBERON:0006595!3.37e-09!169;UBERON:0003408!3.59e-09!10;UBERON:0001004!2.54e-08!72;UBERON:0001723!8.00e-08!3;UBERON:0001033!8.00e-08!3;UBERON:0010056!8.00e-08!3;UBERON:0002530!1.68e-07!59;UBERON:0000464!3.95e-07!104;UBERON:0004921!5.57e-07!129;UBERON:0004185!5.57e-07!129;UBERON:0001831!6.80e-07!1;UBERON:0001567!6.80e-07!1;UBERON:0008801!6.80e-07!1;UBERON:0000998!7.60e-07!1;UBERON:0006868!7.60e-07!1|ontology_enrichment_uberon_v019=UBERON:0000341;4.68e-66;2!UBERON:0002046;1.59e-27;5!UBERON:0000974;7.17e-23;6!UBERON:0001044;8.01e-23;6!UBERON:0003293;8.01e-23;6!UBERON:0003294;8.01e-23;6!UBERON:0010047;8.01e-23;6!UBERON:0003408;8.01e-23;6!UBERON:0000167;8.01e-23;6!UBERON:0001041;2.13e-10;14!UBERON:0007811;5.38e-08;52!UBERON:0000161;6.48e-08;19!UBERON:0000166;6.48e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.96e-66,2;UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0001044,8.47e-23,6;UBERON:0003293,8.47e-23,6;UBERON:0003294,8.47e-23,6;UBERON:0010047,8.47e-23,6;UBERON:0000167,8.47e-23,6;UBERON:0000974,3.47e-14,10;UBERON:0003408,3.97e-14,10;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0002530,1.55e-09,59;UBERON:0000153,4.72e-09,62;UBERON:0007811,4.72e-09,62;UBERON:0008814,2.09e-08,18;UBERON:0000166,5.91e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.62164849248911,2.56077715640925,6.22133695632683,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7038 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11764 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000520769_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_3_at_TG_5end | |||
|id=chr8:133894129..133894154,+ | |||
|ontology_enrichment_celltype=CL:0002623!1.33e-17!3;CL:0002251!1.07e-11!21;CL:0000622!9.37e-11!5;CL:0000154!4.93e-09!6;CL:0002076!8.86e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.13e-44;3!CL:0000622;3.80e-27;5!CL:0000154;8.01e-23;6!CL:0000150;1.36e-15;9!CL:0002251;1.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.38e-44,3;CL:0000622,4.06e-27,5;CL:0000154,8.47e-23,6;CL:0000150,1.41e-15,9;CL:0002251,1.47e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.59e-27;5 | |||
|ontology_enrichment_disease=DOID:1749!5.40e-13!14;DOID:3151!5.75e-07!1;DOID:3149!5.75e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!2.36e-15!21;UBERON:0001044!3.11e-15!6;UBERON:0003293!3.11e-15!6;UBERON:0003294!3.11e-15!6;UBERON:0010047!3.11e-15!6;UBERON:0000167!3.11e-15!6;UBERON:0000161!1.63e-13!35;UBERON:0000974!2.09e-13!10;UBERON:0003343!2.02e-12!4;UBERON:0004785!2.02e-12!4;UBERON:0000341!2.04e-12!2;UBERON:0003127!2.35e-11!2;UBERON:0000165!3.32e-11!28;UBERON:0000930!3.32e-11!28;UBERON:0000078!2.18e-10!18;UBERON:0003729!4.91e-10!5;UBERON:0001007!2.95e-09!155;UBERON:0001555!2.95e-09!155;UBERON:0007026!2.95e-09!155;UBERON:0004119!3.37e-09!169;UBERON:0000925!3.37e-09!169;UBERON:0006595!3.37e-09!169;UBERON:0003408!3.59e-09!10;UBERON:0001004!2.54e-08!72;UBERON:0001723!8.00e-08!3;UBERON:0001033!8.00e-08!3;UBERON:0010056!8.00e-08!3;UBERON:0002530!1.68e-07!59;UBERON:0000464!3.95e-07!104;UBERON:0004921!5.57e-07!129;UBERON:0004185!5.57e-07!129;UBERON:0001831!6.80e-07!1;UBERON:0001567!6.80e-07!1;UBERON:0008801!6.80e-07!1;UBERON:0000998!7.60e-07!1;UBERON:0006868!7.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.68e-66;2!UBERON:0002046;1.59e-27;5!UBERON:0000974;7.17e-23;6!UBERON:0001044;8.01e-23;6!UBERON:0003293;8.01e-23;6!UBERON:0003294;8.01e-23;6!UBERON:0010047;8.01e-23;6!UBERON:0003408;8.01e-23;6!UBERON:0000167;8.01e-23;6!UBERON:0001041;2.13e-10;14!UBERON:0007811;5.38e-08;52!UBERON:0000161;6.48e-08;19!UBERON:0000166;6.48e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.96e-66,2;UBERON:0002046,1.59e-27,5;UBERON:0004117,1.59e-27,5;UBERON:0007689,1.59e-27,5;UBERON:0007123,1.59e-27,5;UBERON:0003091,1.59e-27,5;UBERON:0001044,8.47e-23,6;UBERON:0003293,8.47e-23,6;UBERON:0003294,8.47e-23,6;UBERON:0010047,8.47e-23,6;UBERON:0000167,8.47e-23,6;UBERON:0000974,3.47e-14,10;UBERON:0003408,3.97e-14,10;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0002530,1.55e-09,59;UBERON:0000153,4.72e-09,62;UBERON:0007811,4.72e-09,62;UBERON:0008814,2.09e-08,18;UBERON:0000166,5.91e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.62164849248911,2.56077715640925,6.22133695632683,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.98527574661373,9.28451282708587,0,0,0,10.1835453245064,35.7747424456048,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TG | |||
}} |
Revision as of 03:45, 14 September 2013
Short description: | p3@TG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TG_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 12bp_to_ENST00000520769_5end |
EntrezGene: | TG |
HGNC: | 11764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.38e-44 | 3 |
acinar cell | 4.06e-27 | 5 |
protein secreting cell | 8.47e-23 | 6 |
glandular epithelial cell | 1.41e-15 | 9 |
epithelial cell of alimentary canal | 1.47e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
throat | 3.96e-66 | 2 |
thyroid gland | 1.59e-27 | 5 |
pharyngeal pouch | 1.59e-27 | 5 |
thyroid diverticulum | 1.59e-27 | 5 |
pharyngeal pouch 2 | 1.59e-27 | 5 |
thyroid primordium | 1.59e-27 | 5 |
saliva-secreting gland | 8.47e-23 | 6 |
gland of oral region | 8.47e-23 | 6 |
gland of foregut | 8.47e-23 | 6 |
oral gland | 8.47e-23 | 6 |
oral cavity | 8.47e-23 | 6 |
neck | 3.47e-14 | 10 |
gland of gut | 3.97e-14 | 10 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
gland | 1.55e-09 | 59 |
anterior region of body | 4.72e-09 | 62 |
craniocervical region | 4.72e-09 | 62 |
pharyngeal arch system | 2.09e-08 | 18 |
oral opening | 5.91e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.