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FFCP PHASE1:Mm9::chr4:144483030..144483054,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20148|HGNC=|MCL_coexpression_id=200|UniProt=B1ARS9,B1ARS8,O88876|association_with_transcript=0bp_to_ENSMUST00000128926,ENSMUST00000142808,NM_011303,uc008vrn.2,uc008vro.2_5end|description=CAGE_peak_3_at_Dhrs3_5end|id=chr4:144483030..144483054,+|ontology_enrichment_celltype=CL:0000223!5.64e-09!20;CL:0000066!9.52e-08!25|ontology_enrichment_celltype_v019_2=CL:0000223,5.31e-09,20;CL:0000066,8.10e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.19e-13!130;UBERON:0000925!4.19e-13!130;UBERON:0006595!4.19e-13!130;UBERON:0001007!1.18e-12!128;UBERON:0001555!1.18e-12!128;UBERON:0007026!1.18e-12!128;UBERON:0004921!4.26e-12!126;UBERON:0004185!4.26e-12!126;UBERON:0009854!7.77e-10!23;UBERON:0009856!7.77e-10!23;UBERON:0002107!1.77e-09!22;UBERON:0007499!1.77e-09!22;UBERON:0006925!1.77e-09!22;UBERON:0009497!1.77e-09!22;UBERON:0000015!1.77e-09!22;UBERON:0002423!1.77e-09!22;UBERON:0006235!1.77e-09!22;UBERON:0008835!1.77e-09!22;UBERON:0003894!1.77e-09!22;UBERON:0004161!1.77e-09!22;UBERON:0008836!1.77e-09!22;UBERON:0002365!2.27e-09!25;UBERON:0002330!2.27e-09!25;UBERON:0000160!4.19e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.73e-12,118;UBERON:0000925,1.73e-12,118;UBERON:0006595,1.73e-12,118;UBERON:0001007,4.72e-12,116;UBERON:0001555,4.72e-12,116;UBERON:0007026,4.72e-12,116;UBERON:0004921,1.64e-11,114;UBERON:0009854,7.26e-10,23;UBERON:0009856,7.26e-10,23;UBERON:0002107,1.66e-09,22;UBERON:0007499,1.66e-09,22;UBERON:0006925,1.66e-09,22;UBERON:0009497,1.66e-09,22;UBERON:0000015,1.66e-09,22;UBERON:0002423,1.66e-09,22;UBERON:0006235,1.66e-09,22;UBERON:0008835,1.66e-09,22;UBERON:0003894,1.66e-09,22;UBERON:0004161,1.66e-09,22;UBERON:0008836,1.66e-09,22;UBERON:0002365,2.13e-09,25;UBERON:0002330,2.13e-09,25;UBERON:0003104,1.76e-07,61;UBERON:0009142,1.76e-07,61;UBERON:0002100,1.93e-07,90;UBERON:0000160,2.69e-07,31;UBERON:0005177,3.61e-07,79|phase1_expression=0.480446541314382,16.40184415905,20.9299650119187,29.9439569193762,25.0447864973174,10.7442734023609,10.2789561862031,3.61545305636414,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,1.82227740650843,1.39912375625629,0.315462165358238,1.23402990245165,1.27316895539409,16.0731818385522,5.16312946244604,1.82839852397255,12.6394014006791,13.535147582963,16.0784949952206,14.6459078694085,16.3758136841276,25.0830913682414,16.1299283046356,3.99114919179548,1.27006134691926,1.23012957516914,0,19.0642069035841,14.9611180822643,15.3127017196777,4.18531630736908,3.1253413780952,1.57057123192139,7.05877785637217,6.14740936462601,3.39857247121808,1.38486499773135,1.52065396829272,12.4811791469943,26.6013057078333,0.65407546914134,2.19686182734472,7.38833616482277,3.3596741190087,2.87505128729943,0,0,0.336093799142464,27.2695002198104,14.8997388768154,7.21940929188419,1.21389876515759,1.05798195854407,1.90149421051854,16.2645375393183,16.0073063300005,223.175129885787,408.40180774016,206.749713449315,125.232846196693,92.9808298878162,0.103689612308478,0.540023753326763,0,1.42825492201902,2.20868540951614,0.857435594504678,0.0958454710182364,0,2.20231761998777,1.53224805702225,1.0752457327937,0.659431438650969,0.731901148819277,0.52091337055676,1.67509799400829,2.25105044012672,3.0559649555362,0.883885756421003,0.996601765593721,1.1183966749518,1.96888102666279,3.77857800533928,130.728884404457,114.436375638524,42.8381940235883,166.768286216085,180.637844050452,102.150130258193,25.8417733042423,12.7822741933543,11.1707981979234,10.9535268098205,0.422530259330042,33.3648841277226,7.64415719119937,21.3320010945999,13.8554266247177,11.9079136773296,12.6381111253696,47.3863100834099,4.14300613835475,4.00793775475027,2.60227990149204,4.26251669636998,3.92046345335299,3.3158980921577,2.70454026412121,8.29399502775858,9.88779870937496,18.6533170426686,5.30766331169925,3.39710384889559,3.5334642953663,5.81850303762267,16.775258509631,2.63502717310392,2.30391377494801,17.8819938646014,7.54835284387298,4.19931911695385,5.97230067243404,0.898743836428936,0.915001205637253,0.753926112677186,0.869121600961382,0.767146371990992,0.20778804455956,0.973447578406546,4.27725328171328,5.10068579501381,1.26361379216837,48.1911849980025,3.3831315170303,1.14951052216736,1.80062129805349,1.80845781402858,1.42876648217788,1.66547836370305,2.34254311399322,14.4873887613849,1.5089759505299,3.59301552318857,3.87092473160687,2.84954452155847,1.94633074457919,3.1342694986995,3.70407845534298,2.7864797354589,2.80885274925294,3.60287069960601,7.10408748488982,0.621377317606506,1.17263029990548,1.80062061461015,1.89395788468168,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,1.28441876603886,1.15191894939436,3.11918181750281,4.86412857275134,4.09359964790931,5.70830299756732,9.79706856950714,1.89260953707715,0.514523061896422,32.3810407324122,17.1892868331304,1.2797295032114,1.39342003116263,2.57734922644187,6.45387278794696,6.44896327150124,8.560153175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|EntrezGene=20148
|HGNC=
|MCL_coexpression_id=200
|UniProt=B1ARS9,B1ARS8,O88876
|association_with_transcript=0bp_to_ENSMUST00000128926,ENSMUST00000142808,NM_011303,uc008vrn.2,uc008vro.2_5end
|description=CAGE_peak_3_at_Dhrs3_5end
|id=chr4:144483030..144483054,+
|ontology_enrichment_celltype=CL:0000223!5.64e-09!20;CL:0000066!9.52e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000223,5.31e-09,20;CL:0000066,8.10e-08,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.19e-13!130;UBERON:0000925!4.19e-13!130;UBERON:0006595!4.19e-13!130;UBERON:0001007!1.18e-12!128;UBERON:0001555!1.18e-12!128;UBERON:0007026!1.18e-12!128;UBERON:0004921!4.26e-12!126;UBERON:0004185!4.26e-12!126;UBERON:0009854!7.77e-10!23;UBERON:0009856!7.77e-10!23;UBERON:0002107!1.77e-09!22;UBERON:0007499!1.77e-09!22;UBERON:0006925!1.77e-09!22;UBERON:0009497!1.77e-09!22;UBERON:0000015!1.77e-09!22;UBERON:0002423!1.77e-09!22;UBERON:0006235!1.77e-09!22;UBERON:0008835!1.77e-09!22;UBERON:0003894!1.77e-09!22;UBERON:0004161!1.77e-09!22;UBERON:0008836!1.77e-09!22;UBERON:0002365!2.27e-09!25;UBERON:0002330!2.27e-09!25;UBERON:0000160!4.19e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.73e-12,118;UBERON:0000925,1.73e-12,118;UBERON:0006595,1.73e-12,118;UBERON:0001007,4.72e-12,116;UBERON:0001555,4.72e-12,116;UBERON:0007026,4.72e-12,116;UBERON:0004921,1.64e-11,114;UBERON:0009854,7.26e-10,23;UBERON:0009856,7.26e-10,23;UBERON:0002107,1.66e-09,22;UBERON:0007499,1.66e-09,22;UBERON:0006925,1.66e-09,22;UBERON:0009497,1.66e-09,22;UBERON:0000015,1.66e-09,22;UBERON:0002423,1.66e-09,22;UBERON:0006235,1.66e-09,22;UBERON:0008835,1.66e-09,22;UBERON:0003894,1.66e-09,22;UBERON:0004161,1.66e-09,22;UBERON:0008836,1.66e-09,22;UBERON:0002365,2.13e-09,25;UBERON:0002330,2.13e-09,25;UBERON:0003104,1.76e-07,61;UBERON:0009142,1.76e-07,61;UBERON:0002100,1.93e-07,90;UBERON:0000160,2.69e-07,31;UBERON:0005177,3.61e-07,79
|phase1_expression=0.480446541314382,16.40184415905,20.9299650119187,29.9439569193762,25.0447864973174,10.7442734023609,10.2789561862031,3.61545305636414,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,1.82227740650843,1.39912375625629,0.315462165358238,1.23402990245165,1.27316895539409,16.0731818385522,5.16312946244604,1.82839852397255,12.6394014006791,13.535147582963,16.0784949952206,14.6459078694085,16.3758136841276,25.0830913682414,16.1299283046356,3.99114919179548,1.27006134691926,1.23012957516914,0,19.0642069035841,14.9611180822643,15.3127017196777,4.18531630736908,3.1253413780952,1.57057123192139,7.05877785637217,6.14740936462601,3.39857247121808,1.38486499773135,1.52065396829272,12.4811791469943,26.6013057078333,0.65407546914134,2.19686182734472,7.38833616482277,3.3596741190087,2.87505128729943,0,0,0.336093799142464,27.2695002198104,14.8997388768154,7.21940929188419,1.21389876515759,1.05798195854407,1.90149421051854,16.2645375393183,16.0073063300005,223.175129885787,408.40180774016,206.749713449315,125.232846196693,92.9808298878162,0.103689612308478,0.540023753326763,0,1.42825492201902,2.20868540951614,0.857435594504678,0.0958454710182364,0,2.20231761998777,1.53224805702225,1.0752457327937,0.659431438650969,0.731901148819277,0.52091337055676,1.67509799400829,2.25105044012672,3.0559649555362,0.883885756421003,0.996601765593721,1.1183966749518,1.96888102666279,3.77857800533928,130.728884404457,114.436375638524,42.8381940235883,166.768286216085,180.637844050452,102.150130258193,25.8417733042423,12.7822741933543,11.1707981979234,10.9535268098205,0.422530259330042,33.3648841277226,7.64415719119937,21.3320010945999,13.8554266247177,11.9079136773296,12.6381111253696,47.3863100834099,4.14300613835475,4.00793775475027,2.60227990149204,4.26251669636998,3.92046345335299,3.3158980921577,2.70454026412121,8.29399502775858,9.88779870937496,18.6533170426686,5.30766331169925,3.39710384889559,3.5334642953663,5.81850303762267,16.775258509631,2.63502717310392,2.30391377494801,17.8819938646014,7.54835284387298,4.19931911695385,5.97230067243404,0.898743836428936,0.915001205637253,0.753926112677186,0.869121600961382,0.767146371990992,0.20778804455956,0.973447578406546,4.27725328171328,5.10068579501381,1.26361379216837,48.1911849980025,3.3831315170303,1.14951052216736,1.80062129805349,1.80845781402858,1.42876648217788,1.66547836370305,2.34254311399322,14.4873887613849,1.5089759505299,3.59301552318857,3.87092473160687,2.84954452155847,1.94633074457919,3.1342694986995,3.70407845534298,2.7864797354589,2.80885274925294,3.60287069960601,7.10408748488982,0.621377317606506,1.17263029990548,1.80062061461015,1.89395788468168,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,1.28441876603886,1.15191894939436,3.11918181750281,4.86412857275134,4.09359964790931,5.70830299756732,9.79706856950714,1.89260953707715,0.514523061896422,32.3810407324122,17.1892868331304,1.2797295032114,1.39342003116263,2.57734922644187,6.45387278794696,6.44896327150124,8.56015317506516,18.9811624617805,14.3288090609889,11.3100843960121,9.54991065797524,11.5028811400281,14.3811105384675,21.3976669375947,26.0875067963221,10.4317345524195,4.45569199177942,5.63538678365402,9.57161240872977,11.2492442557223,15.2194729161991,29.9108820597737,39.707129806513,58.5605254848328,57.503078387559,59.2905254174298,3.67059232575407,4.32429789249047,3.82265591054251,7.91154473415161,10.3706178693539,13.7497959961967,23.5910832709665,17.8348749452539,27.7307027319962,54.6319184803947,42.7962089818779,55.8547434875063,64.9127716324077,110.68820414302,106.137574699941,21.6161232494927,2.08440552947533,0.651859905768103,0.678980343100753,1.64283173801951,5.19269398069629,7.37935286746643,16.5863600679129,6.77831119656621,5.75808193086815,9.40783135079174,8.1931657357869,14.3328534948693,22.1313059629713,214.123623193767,137.608138006134,2.95058563811422,8.55403913544671,0.481651769963376,0.937693492737625,0.327869890753351,4.79694761688309,9.14973836307144,16.3984272604588,8.61693590931196,8.84184552424442,11.5855310522845,11.3230612315533,8.90583543684768,9.64444331107329,7.51046778098395,0.321321316421807,9.65192579416227,4.62970569534864,2.44330439030364,8.57844639457184,26.5490276679926,1.21390318077491,2.41858845571801,3.96070667487386,5.61073596473468,3.07435147943927,3.6179961043551,5.81653967164009,7.84294232446387,13.5895805912401,17.9211634577498,33.0033738394198,1.70219802876894,1.44048875225048,3.36332577835162,2.35770738534752,3.54680467284547,7.31312152168489,4.60737257685939,14.9187825066154,11.2642419870581,9.10877904714427,10.1443063105282,5.27636009412736,4.35953952078945,3.98065304525829,3.81991500810037,7.2221995887827,17.488850197791,1.11255181206306,1.19609616558497,1.857481811669,0.925972636848558,1.31857919903284,0.956859594047176,0.915112692826091,3.39956859987711,3.77868921273877,4.14599921413271,54.4162252268615,3.16335993581135,4.06638934253697,6.37231510848627,8.57262013659322,10.0446779323242,16.8580432981026,20.9939777542353,31.4107130380836,17.6276363676838,19.8828580187816,1.12738587736838,2.0932316446157,1.15820943319968,1.94451188344048,1.16243841129958,3.54807863530634,2.69921648885234,2.47388331203505,1.36317147753424,0.966336483304024,3.16833006883652,10.1123558601017,1.21635129174099,1.43795340030758,1.81889152168913,1.43221356533985,1.98681354781265,3.846254384639,3.83992770653901,7.37055084621478,3.96275394605999,6.45287584875779,9.74578807397524,7.79315917286669,10.2851673919781,7.9355634265324,0,0.0897138566094757,0.167884616364078,21.4440449375731,13.7008207079363,6.95976172215607,24.0092584568554,7.02200945649509,0.564751842617067,0.920650473014354,0.572895513439397,0.859265911718438,2.05524755931193,0,0,0.45032120322422,0.906284817968409,2.07104124700728,0.830298780673413,0.798049746802062,1.70733605754134,4.132814190161,1.88651846365184,3.67687016900028,6.44515510624684,3.91466608753899,4.1719497246936,8.08631077644152,4.81610669791456,5.47016390019621,4.21386783614471,4.67383612555546,5.05432126809397,8.57328644309533,3.70829843023538,2.70072908649187,5.35711671044299,3.82717192349433,5.14303878578123,5.85670160325814,5.24559617884106,6.39524233182245,4.6113596403512,5.92302255241735,6.40247905054704,4.99832451731901,5.56796866768033,4.48913817326191,5.21994079746366,5.1222330835293,6.13846564754534,6.66228417099654,7.71626443924566,4.24677982494508,8.18760629558929,4.94203424311086,2.10417165275728,4.63241980150983,5.10109238364927
|short_description=p3@Dhrs3
}}

Revision as of 04:23, 14 September 2013

Short description:p3@Dhrs3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dhrs3_5end
Coexpression cluster:MCL_coexpression_mm9:200
Association with transcript: 0bp_to_ENSMUST00000128926, ENSMUST00000142808, NM_011303, uc008vrn.2, uc008vro.2_5end
EntrezGene:Dhrs3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dhrs3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.54
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I114.65
GP2+ M cell, pool3.CNhs13240.11847-124I216.38
Ileum epithelium, pool1.CNhs13199.10252-104B925.08
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7223.18
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7408.40
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2206.75
Mouse Microglia, donor1.CNhs12629.11718-123C8125.23
Mouse Microglia, donor2.CNhs12634.11736-123E892.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3130.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7114.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C442.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C8166.77
Mouse hepatocyte, donor6.CNhs13090.11822-124F4180.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F6102.15
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H133.36
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.39
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I38.29
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H118.65
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H717.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.97
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G448.19
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A214.49
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I332.38
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D36.45
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D118.98
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E321.40
intestine, neonate N30.CNhs11131.1384-42G126.09
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C711.25
kidney, neonate N00.CNhs11214.646-21G715.22
kidney, neonate N10.CNhs11206.758-6D529.91
kidney, neonate N20.CNhs11113.832-19I139.71
kidney, neonate N25.CNhs11122.1353-25F358.56
kidney, neonate N30.CNhs11203.1385-42H157.50
liver, adult pregnant day01.CNhs10466.508-5B259.29
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A313.75
liver, embryo E18.CNhs10579.499-43G423.59
liver, neonate N00.CNhs11117.641-24F417.83
liver, neonate N03.CNhs11123.1345-25G227.73
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H242.80
liver, neonate N10.CNhs11115.751-24B955.85
liver, neonate N20.CNhs11220.823-25A364.91
liver, neonate N25.CNhs11198.1368-26H1110.69
liver, neonate N30.CNhs11106.1382-42D1106.14
lung, adult.CNhs10474.28-22B121.62
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H222.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1214.12
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1137.61
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G68.58
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.98
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I117.49
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H654.42
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B816.86
stomach, neonate N07.CNhs11210.718-18A920.99
stomach, neonate N25.CNhs11104.1355-25E431.41
stomach, neonate N30.CNhs11134.1386-42I117.63
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C47.37
thymus, neonate N07.CNhs11211.713-19D33.96
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A29.75
thymus, neonate N25.CNhs11125.1362-25G77.79
thymus, neonate N30.CNhs11132.1393-42G210.29
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E421.44
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D524.01
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endodermal cell5.31e-0920
epithelial cell8.10e-0825

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.73e-12118
endoderm1.73e-12118
presumptive endoderm1.73e-12118
digestive system4.72e-12116
digestive tract4.72e-12116
primitive gut4.72e-12116
subdivision of digestive tract1.64e-11114
digestive tract diverticulum7.26e-1023
sac7.26e-1023
liver1.66e-0922
epithelial sac1.66e-0922
digestive gland1.66e-0922
epithelium of foregut-midgut junction1.66e-0922
anatomical boundary1.66e-0922
hepatobiliary system1.66e-0922
foregut-midgut junction1.66e-0922
hepatic diverticulum1.66e-0922
liver primordium1.66e-0922
septum transversum1.66e-0922
liver bud1.66e-0922
exocrine gland2.13e-0925
exocrine system2.13e-0925
mesenchyme1.76e-0761
entire embryonic mesenchyme1.76e-0761
trunk1.93e-0790
intestine2.69e-0731
trunk region element3.61e-0779







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