FFCP PHASE1:Hg19::chr8:18942386..18942401,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23362|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19093|TSSclassifier=W|UniProt=E5RIH3|association_with_transcript=-146bp_to_ENST00000521475_5end|coexpression_cluster_id=C1542|description=CAGE_peak_22_at_PSD3_5end|id=chr8:18942386..18942401,-|ontology_enrichment_celltype=CL:0000057!2.43e-14!75;CL:0000055!1.68e-12!180;CL:0002620!2.70e-12!23;CL:0002552!3.56e-07!5;CL:0000048!5.13e-07!430|ontology_enrichment_celltype_v019=CL:0000056;4.90e-16;4!CL:0000515;4.10e-10;3!CL:0000680;2.17e-09;7!CL:0002174;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0002372;3.32e-08;1!CL:0000501;3.32e-08;1|ontology_enrichment_celltype_v019_2=CL:0000515,3.09e-16,4;CL:0000228,2.89e-08,1;CL:0002372,2.89e-08,1;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0000057,2.31e-07,76|ontology_enrichment_development_v019=CL:0000515;4.90e-16;4|ontology_enrichment_disease=DOID:17!3.05e-07!5;DOID:450!3.05e-07!5;DOID:66!3.05e-07!5;DOID:423!3.05e-07!5;DOID:0080000!3.05e-07!5;DOID:11722!3.05e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.47e-07!375;UBERON:0002097!6.99e-07!40;UBERON:0003102!8.96e-07!95|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-10;3!UBERON:0001282;3.32e-08;1!UBERON:0009842;3.32e-08;1!UBERON:0003704;3.32e-08;1!UBERON:0001171;3.32e-08;1!UBERON:0001172;3.32e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.62e-10,3;UBERON:0004854,1.62e-10,3;UBERON:0009034,1.62e-10,3;UBERON:0002095,1.62e-10,3;UBERON:0004782,1.62e-10,3;UBERON:0003281,1.62e-10,3;UBERON:0009664,1.62e-10,3;UBERON:0002296,1.62e-10,3;UBERON:0005602,1.62e-10,3;UBERON:0001179,1.62e-10,3;UBERON:0006293,1.62e-10,3;UBERON:0001282,3.83e-08,1;UBERON:0009842,3.83e-08,1;UBERON:0003704,3.83e-08,1;UBERON:0001171,3.83e-08,1;UBERON:0001172,3.83e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,1.72101972449288,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.469737994575059,0.161872944368132,0.280901613404497,1.02077085627447,0.491337269247072,0.516628905878827,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,1.38532057742091,0.438977620880838,0.919463387397059,0.600952235626387,0,1.97328599257748,0.85422955527427,0.211931901159562,1.50045548042201,0.618315175430633,0.772921620136887,0,0.506328996723799,0,2.01947019395292,0.460249493211497,0.161646056818812,1.77504796258307,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,1.2328579353023,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0,0,0,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,1.04980416073495,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,1.44701316529778,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0,0,0,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,0,5.82672910881823,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |||
|TSSclassifier=W | |||
|UniProt=E5RIH3 | |||
|association_with_transcript=-146bp_to_ENST00000521475_5end | |||
|coexpression_cluster_id=C1542 | |||
|description=CAGE_peak_22_at_PSD3_5end | |||
|id=chr8:18942386..18942401,- | |||
|ontology_enrichment_celltype=CL:0000057!2.43e-14!75;CL:0000055!1.68e-12!180;CL:0002620!2.70e-12!23;CL:0002552!3.56e-07!5;CL:0000048!5.13e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000056;4.90e-16;4!CL:0000515;4.10e-10;3!CL:0000680;2.17e-09;7!CL:0002174;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0002372;3.32e-08;1!CL:0000501;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.09e-16,4;CL:0000228,2.89e-08,1;CL:0002372,2.89e-08,1;CL:0002174,3.57e-08,1;CL:0000501,3.57e-08,1;CL:0000057,2.31e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000515;4.90e-16;4 | |||
|ontology_enrichment_disease=DOID:17!3.05e-07!5;DOID:450!3.05e-07!5;DOID:66!3.05e-07!5;DOID:423!3.05e-07!5;DOID:0080000!3.05e-07!5;DOID:11722!3.05e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.47e-07!375;UBERON:0002097!6.99e-07!40;UBERON:0003102!8.96e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-10;3!UBERON:0001282;3.32e-08;1!UBERON:0009842;3.32e-08;1!UBERON:0003704;3.32e-08;1!UBERON:0001171;3.32e-08;1!UBERON:0001172;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.62e-10,3;UBERON:0004854,1.62e-10,3;UBERON:0009034,1.62e-10,3;UBERON:0002095,1.62e-10,3;UBERON:0004782,1.62e-10,3;UBERON:0003281,1.62e-10,3;UBERON:0009664,1.62e-10,3;UBERON:0002296,1.62e-10,3;UBERON:0005602,1.62e-10,3;UBERON:0001179,1.62e-10,3;UBERON:0006293,1.62e-10,3;UBERON:0001282,3.83e-08,1;UBERON:0009842,3.83e-08,1;UBERON:0003704,3.83e-08,1;UBERON:0001171,3.83e-08,1;UBERON:0001172,3.83e-08,1 | |||
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|short_description=p22@PSD3 | |||
}} |
Revision as of 04:26, 14 September 2013
Short description: | p22@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -146bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.09e-16 | 4 |
multinucleate cell | 2.89e-08 | 1 |
myotube | 2.89e-08 | 1 |
follicular cell of ovary | 3.57e-08 | 1 |
granulosa cell | 3.57e-08 | 1 |
fibroblast | 2.31e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.62e-10 | 3 |
gastrointestinal system mesentery | 1.62e-10 | 3 |
stomach region | 1.62e-10 | 3 |
mesentery | 1.62e-10 | 3 |
gastrointestinal system serosa | 1.62e-10 | 3 |
mesentery of stomach | 1.62e-10 | 3 |
gut mesentery | 1.62e-10 | 3 |
dorsal mesentery | 1.62e-10 | 3 |
dorsal mesogastrium | 1.62e-10 | 3 |
peritoneal cavity | 1.62e-10 | 3 |
spleen primordium | 1.62e-10 | 3 |
intralobular bile duct | 3.83e-08 | 1 |
acinus | 3.83e-08 | 1 |
intrahepatic bile duct | 3.83e-08 | 1 |
portal lobule | 3.83e-08 | 1 |
hepatic acinus | 3.83e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.