FFCP PHASE1:Hg19::chr8:29605959..29605973,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=93bp_to_ENST00000517491_5end|coexpression_cluster_id=C58|description=CAGE_peak_1_at_ENST00000517491_5end|id=chr8:29605959..29605973,+|ontology_enrichment_celltype=CL:0000148!3.52e-61!10;CL:0000541!3.52e-61!10;CL:0000147!1.32e-43!14;CL:0002567!1.43e-38!3;CL:0002619!1.08e-37!3;CL:0000710!2.09e-30!20;CL:0000075!2.10e-22!27;CL:0002077!3.06e-18!33;CL:0000325!2.37e-15!39;CL:0002566!3.50e-14!1;CL:0000333!7.16e-14!41;CL:0000133!1.33e-09!59;CL:0000221!6.39e-08!71|ontology_enrichment_celltype_v019=CL:0000148;5.48e-107;10!CL:0000147;1.63e-76;14!CL:0002567;1.92e-66;3!CL:0000710;1.23e-53;20!CL:0000075;8.85e-40;27!CL:0002077;7.42e-28;34!CL:0002566;1.34e-23;1!CL:0002619;1.30e-08;3!CL:0000149;8.61e-07;4|ontology_enrichment_celltype_v019_2=CL:0000148,5.93e-107,10;CL:0000541,5.93e-107,10;CL:0000147,1.72e-76,14;CL:0002567,1.92e-66,3;CL:0000710,1.28e-53,20;CL:0000075,9.11e-40,27;CL:0002077,1.32e-31,34;CL:0000333,5.27e-25,41;CL:0002566,1.34e-23,1;CL:0000133,1.26e-17,59;CL:0000221,1.61e-14,72;CL:0002619,1.30e-08,3;CL:0000149,8.61e-07,4|ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!CL:0000221;4.25e-08;72|ontology_enrichment_disease=DOID:1909!1.27e-25!2|ontology_enrichment_disease_v019=DOID:1909;3.43e-12;2|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-12,2|ontology_enrichment_uberon=UBERON:0001154!1.25e-13!1;UBERON:0001153!1.25e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,3.2389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1139682031628,20.627374980147,12.8939191931052,15.3965201420435,1.64523988325318,5.40617504119051,32.8700397525165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000517491}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=93bp_to_ENST00000517491_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_ENST00000517491_5end | |||
|id=chr8:29605959..29605973,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.52e-61!10;CL:0000541!3.52e-61!10;CL:0000147!1.32e-43!14;CL:0002567!1.43e-38!3;CL:0002619!1.08e-37!3;CL:0000710!2.09e-30!20;CL:0000075!2.10e-22!27;CL:0002077!3.06e-18!33;CL:0000325!2.37e-15!39;CL:0002566!3.50e-14!1;CL:0000333!7.16e-14!41;CL:0000133!1.33e-09!59;CL:0000221!6.39e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.48e-107;10!CL:0000147;1.63e-76;14!CL:0002567;1.92e-66;3!CL:0000710;1.23e-53;20!CL:0000075;8.85e-40;27!CL:0002077;7.42e-28;34!CL:0002566;1.34e-23;1!CL:0002619;1.30e-08;3!CL:0000149;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.93e-107,10;CL:0000541,5.93e-107,10;CL:0000147,1.72e-76,14;CL:0002567,1.92e-66,3;CL:0000710,1.28e-53,20;CL:0000075,9.11e-40,27;CL:0002077,1.32e-31,34;CL:0000333,5.27e-25,41;CL:0002566,1.34e-23,1;CL:0000133,1.26e-17,59;CL:0000221,1.61e-14,72;CL:0002619,1.30e-08,3;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!CL:0000221;4.25e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.27e-25!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.43e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001154!1.25e-13!1;UBERON:0001153!1.25e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,3.2389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1139682031628,20.627374980147,12.8939191931052,15.3965201420435,1.64523988325318,5.40617504119051,32.8700397525165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000517491 | |||
}} |
Revision as of 05:01, 14 September 2013
Short description: | p1@ENST00000517491 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000517491_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 93bp_to_ENST00000517491_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.93e-107 | 10 |
melanoblast | 5.93e-107 | 10 |
pigment cell | 1.72e-76 | 14 |
light melanocyte | 1.92e-66 | 3 |
neurecto-epithelial cell | 1.28e-53 | 20 |
columnar/cuboidal epithelial cell | 9.11e-40 | 27 |
ecto-epithelial cell | 1.32e-31 | 34 |
migratory neural crest cell | 5.27e-25 | 41 |
dark melanocyte | 1.34e-23 | 1 |
neurectodermal cell | 1.26e-17 | 59 |
ectodermal cell | 1.61e-14 | 72 |
adult endothelial progenitor cell | 1.30e-08 | 3 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.24e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.