FFCP PHASE1:Mm9::chr4:84321280..84321298,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=242509|HGNC=|MCL_coexpression_id=3482|UniProt=E9Q5T4,Q2TBA4,Q8BMQ3,Q8C0F6|association_with_transcript=-290bp_to_ENSMUST00000107198,ENSMUST00000167890,NM_172870,uc008tli.2,uc008tlj.1_5end|description=CAGE_peak_5_at_Bnc2_5end|id=chr4:84321280..84321298,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!5.89e-08!18;UBERON:0005564!5.89e-08!18;UBERON:0003133!7.65e-08!24;UBERON:0005156!9.14e-08!26;UBERON:0000990!9.14e-08!26;UBERON:0004176!2.24e-07!17;UBERON:0009196!2.24e-07!17;UBERON:0009117!2.24e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005156,7.87e-15,26;UBERON:0000990,7.87e-15,26;UBERON:0003133,2.54e-14,24;UBERON:0000991,1.16e-13,18;UBERON:0005564,1.16e-13,18;UBERON:0004176,1.94e-12,17;UBERON:0009196,1.94e-12,17;UBERON:0009117,1.94e-12,17;UBERON:0002102,1.08e-08,7;UBERON:0004710,1.08e-08,7;UBERON:0005419,1.08e-08,7;UBERON:0005417,1.08e-08,7;UBERON:0005729,1.08e-08,7;UBERON:0000473,1.11e-08,14;UBERON:0000474,5.53e-08,9;UBERON:0003135,5.77e-08,15;UBERON:0003102,1.27e-07,22;UBERON:0010708,1.76e-07,8;UBERON:0003101,2.43e-07,16;UBERON:0000079,2.43e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,0.782391344348039,0,0.219686182734472,0,0.839918529752175,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0,0,0.23517741427141,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.62942982160506,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.60281927134286,0.136072998302656,0.2562274405697,0.187403449119458,0,0.646703978798527,3.9712276835242,4.75068035242662,1.97276159184817,2.78047249225598,1.0447564995665,1.85203922767149,1.59227413454795,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,1.2797295032114,2.09013004674395,0.515469845288373,0.605050573870028,0.667134131534611,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.974820435595601,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,0,0.166845105716094,1.17935397067922,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,0.160550589987792,0,0.491804836130026,0.252470927204373,0,0,1.29254038639679,1.43381278771531,0.891194696329576,1.41538265394416,0.809621403349789,0.584511715822624,0.790575555893047,0,2.12910127812403,1.95872164033981,1.46598263418218,1.97964147567043,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,1.06949213515416,0,0,0,0,0.540183282093931,0.517434735131018,0.857348140126369,1.95074257006501,1.24858172321449,1.31639216481697,0.304464949114599,0.23467170806371,0,0,0.98931751764888,3.55221738730992,3.01564624640779,2.86493625607528,3.28281799490123,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0,0.474503990371703,2.03319467126849,1.08005340821801,0.209088296014469,0.436725127492355,0.674321731924103,0.41326727862668,0.523511883968059,0.259229946583586,0,0,1.49516546043979,2.64733584731356,2.91676782516071,2.32487682259916,2.02747350588934,2.11243029562357,1.69265700297135,1.67774951081137,0.724752362478018,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,1.46521299413812,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,3.59122386060928,2.04880326904961,1.45864030240976,0.419226325255965,0.367687016900028,0.888986911206461,0.618105171716683,0,0,0.760437899670719,0.377252682772152,1.03005658216871,0.576226371643824,0.689225627467359,0.952587382566147,1.39061191133827,0.77163688185482,1.23625770240992,1.17759136107518,1.02860775715625,0.887379030796687,1.1921809497366,1.0174249164263,1.12931256498397,0.676916863133412,1.09756783723664,0.789209134313529,0.135804113845862,1.68342681497322,1.06771516311757,0.788035859004508,1.22769312950907,1.08455788830176,1.15743966588685,0.749431733813838,0.701794825336225,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p5@Bnc2}} | ||
|EntrezGene=242509 | |||
|HGNC= | |||
|MCL_coexpression_id=3482 | |||
|UniProt=E9Q5T4,Q2TBA4,Q8BMQ3,Q8C0F6 | |||
|association_with_transcript=-290bp_to_ENSMUST00000107198,ENSMUST00000167890,NM_172870,uc008tli.2,uc008tlj.1_5end | |||
|description=CAGE_peak_5_at_Bnc2_5end | |||
|id=chr4:84321280..84321298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!5.89e-08!18;UBERON:0005564!5.89e-08!18;UBERON:0003133!7.65e-08!24;UBERON:0005156!9.14e-08!26;UBERON:0000990!9.14e-08!26;UBERON:0004176!2.24e-07!17;UBERON:0009196!2.24e-07!17;UBERON:0009117!2.24e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,7.87e-15,26;UBERON:0000990,7.87e-15,26;UBERON:0003133,2.54e-14,24;UBERON:0000991,1.16e-13,18;UBERON:0005564,1.16e-13,18;UBERON:0004176,1.94e-12,17;UBERON:0009196,1.94e-12,17;UBERON:0009117,1.94e-12,17;UBERON:0002102,1.08e-08,7;UBERON:0004710,1.08e-08,7;UBERON:0005419,1.08e-08,7;UBERON:0005417,1.08e-08,7;UBERON:0005729,1.08e-08,7;UBERON:0000473,1.11e-08,14;UBERON:0000474,5.53e-08,9;UBERON:0003135,5.77e-08,15;UBERON:0003102,1.27e-07,22;UBERON:0010708,1.76e-07,8;UBERON:0003101,2.43e-07,16;UBERON:0000079,2.43e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,0.782391344348039,0,0.219686182734472,0,0.839918529752175,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0,0,0.23517741427141,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.62942982160506,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.60281927134286,0.136072998302656,0.2562274405697,0.187403449119458,0,0.646703978798527,3.9712276835242,4.75068035242662,1.97276159184817,2.78047249225598,1.0447564995665,1.85203922767149,1.59227413454795,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,1.2797295032114,2.09013004674395,0.515469845288373,0.605050573870028,0.667134131534611,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.974820435595601,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.627994911365499,0.616985819609003,0,0.166845105716094,1.17935397067922,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,0.160550589987792,0,0.491804836130026,0.252470927204373,0,0,1.29254038639679,1.43381278771531,0.891194696329576,1.41538265394416,0.809621403349789,0.584511715822624,0.790575555893047,0,2.12910127812403,1.95872164033981,1.46598263418218,1.97964147567043,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,1.06949213515416,0,0,0,0,0.540183282093931,0.517434735131018,0.857348140126369,1.95074257006501,1.24858172321449,1.31639216481697,0.304464949114599,0.23467170806371,0,0,0.98931751764888,3.55221738730992,3.01564624640779,2.86493625607528,3.28281799490123,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0,0.474503990371703,2.03319467126849,1.08005340821801,0.209088296014469,0.436725127492355,0.674321731924103,0.41326727862668,0.523511883968059,0.259229946583586,0,0,1.49516546043979,2.64733584731356,2.91676782516071,2.32487682259916,2.02747350588934,2.11243029562357,1.69265700297135,1.67774951081137,0.724752362478018,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,1.46521299413812,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,3.59122386060928,2.04880326904961,1.45864030240976,0.419226325255965,0.367687016900028,0.888986911206461,0.618105171716683,0,0,0.760437899670719,0.377252682772152,1.03005658216871,0.576226371643824,0.689225627467359,0.952587382566147,1.39061191133827,0.77163688185482,1.23625770240992,1.17759136107518,1.02860775715625,0.887379030796687,1.1921809497366,1.0174249164263,1.12931256498397,0.676916863133412,1.09756783723664,0.789209134313529,0.135804113845862,1.68342681497322,1.06771516311757,0.788035859004508,1.22769312950907,1.08455788830176,1.15743966588685,0.749431733813838,0.701794825336225,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Bnc2 | |||
}} |
Revision as of 05:31, 14 September 2013
Short description: | p5@Bnc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bnc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3482 |
Association with transcript: | -290bp_to_ENSMUST00000107198, ENSMUST00000167890, NM_172870, uc008tli.2, uc008tlj.1_5end |
EntrezGene: | Bnc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 7.87e-15 | 26 |
reproductive system | 7.87e-15 | 26 |
reproductive organ | 2.54e-14 | 24 |
gonad | 1.16e-13 | 18 |
gonad primordium | 1.16e-13 | 18 |
external genitalia | 1.94e-12 | 17 |
indifferent external genitalia | 1.94e-12 | 17 |
indifferent gonad | 1.94e-12 | 17 |
forelimb | 1.08e-08 | 7 |
pectoral appendage | 1.08e-08 | 7 |
pectoral appendage bud | 1.08e-08 | 7 |
forelimb bud | 1.08e-08 | 7 |
forelimb/pectoral fin field | 1.08e-08 | 7 |
testis | 1.11e-08 | 14 |
female reproductive system | 5.53e-08 | 9 |
male reproductive organ | 5.77e-08 | 15 |
surface structure | 1.27e-07 | 22 |
pectoral complex | 1.76e-07 | 8 |
male organism | 2.43e-07 | 16 |
male reproductive system | 2.43e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.