FFCP PHASE1:Mm9::chr5:113567692..113567703,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:113567692..113567703,+|id=chr5:113567692..113567703,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.22e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!3.49e-11!23;UBERON:0009856!3.49e-11!23;UBERON:0002107!1.34e-10!22;UBERON:0007499!1.34e-10!22;UBERON:0006925!1.34e-10!22;UBERON:0009497!1.34e-10!22;UBERON:0000015!1.34e-10!22;UBERON:0002423!1.34e-10!22;UBERON:0006235!1.34e-10!22;UBERON:0008835!1.34e-10!22;UBERON:0003894!1.34e-10!22;UBERON:0004161!1.34e-10!22;UBERON:0008836!1.34e-10!22;UBERON:0002365!3.14e-10!25;UBERON:0002330!3.14e-10!25;UBERON:0003914!3.21e-09!47;UBERON:0004111!1.02e-08!122;UBERON:0000025!7.76e-08!114;UBERON:0000466!2.69e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.16e-17,23;UBERON:0009856,1.16e-17,23;UBERON:0002107,2.52e-16,22;UBERON:0007499,2.52e-16,22;UBERON:0006925,2.52e-16,22;UBERON:0009497,2.52e-16,22;UBERON:0000015,2.52e-16,22;UBERON:0002423,2.52e-16,22;UBERON:0006235,2.52e-16,22;UBERON:0008835,2.52e-16,22;UBERON:0003894,2.52e-16,22;UBERON:0004161,2.52e-16,22;UBERON:0008836,2.52e-16,22;UBERON:0002365,7.38e-14,25;UBERON:0002330,7.38e-14,25;UBERON:0000949,1.43e-08,72;UBERON:0003914,2.20e-08,47;UBERON:0004111,4.07e-08,122;UBERON:0005177,6.03e-08,79;UBERON:0001264,6.62e-08,12;UBERON:0005256,9.36e-08,45;UBERON:0000025,4.46e-07,114|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.695036658406197,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0,0,0,0.279182999001381,2.8138130501584,1.06958773443767,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,1.15945795480671,3.44169550792555,4.75979933595425,7.55584468292944,6.49776417447669,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,1.1418387971906,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0,1.04853447583376,0,0.376963056338593,1.04294592115366,1.79000820131231,1.0389402227978,1.62241263067758,0.101839363850316,0.124406970610093,0.252722758433675,6.94458124425364,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,3.88055056108524,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0.284163499395593,0.414251545071004,2.11073453982987,1.62055855314913,0.946978942340841,0.787056926989615,0.462801338662135,0,0.536546802799238,0.350296027101508,0.493679549740441,1.14917224855367,0.162137619091711,0.877199924551994,0.878200461164203,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.329397909448022,1.00534083520108,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,5.92905254174298,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.964708639009667,0,0.863088412352432,1.78348749452539,2.19649130550465,10.0637744569148,4.09355042435354,4.05648975048929,5.80931419278357,2.51156378930677,3.37710464954357,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0,0,0.345369963731791,0.433947175744535,0,0,0,0.827810238914197,0.642202359951168,0.468846746368813,0,0.504941854408746,0.94652465824877,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.57057053137446,0,0.178065603667255,0,0,1.32745138339963,0.971122544619926,1.209294227859,2.82907619633847,1.47650946440386,0.922305443831782,0.516856586336442,1.45413491791002,2.13898427030833,2.84433082142234,0,2.06271086496374,2.04263763452273,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0,0.42366414172764,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0.619160603889667,0.185194527369712,0,0,0,0.679913719975421,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0,0.674321731924103,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.608175645870493,0.410843828659309,0.25984164595559,0.358053391334963,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,2.26730383615211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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:113567692..113567703,+ | |||
|id=chr5:113567692..113567703,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.22e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!3.49e-11!23;UBERON:0009856!3.49e-11!23;UBERON:0002107!1.34e-10!22;UBERON:0007499!1.34e-10!22;UBERON:0006925!1.34e-10!22;UBERON:0009497!1.34e-10!22;UBERON:0000015!1.34e-10!22;UBERON:0002423!1.34e-10!22;UBERON:0006235!1.34e-10!22;UBERON:0008835!1.34e-10!22;UBERON:0003894!1.34e-10!22;UBERON:0004161!1.34e-10!22;UBERON:0008836!1.34e-10!22;UBERON:0002365!3.14e-10!25;UBERON:0002330!3.14e-10!25;UBERON:0003914!3.21e-09!47;UBERON:0004111!1.02e-08!122;UBERON:0000025!7.76e-08!114;UBERON:0000466!2.69e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.16e-17,23;UBERON:0009856,1.16e-17,23;UBERON:0002107,2.52e-16,22;UBERON:0007499,2.52e-16,22;UBERON:0006925,2.52e-16,22;UBERON:0009497,2.52e-16,22;UBERON:0000015,2.52e-16,22;UBERON:0002423,2.52e-16,22;UBERON:0006235,2.52e-16,22;UBERON:0008835,2.52e-16,22;UBERON:0003894,2.52e-16,22;UBERON:0004161,2.52e-16,22;UBERON:0008836,2.52e-16,22;UBERON:0002365,7.38e-14,25;UBERON:0002330,7.38e-14,25;UBERON:0000949,1.43e-08,72;UBERON:0003914,2.20e-08,47;UBERON:0004111,4.07e-08,122;UBERON:0005177,6.03e-08,79;UBERON:0001264,6.62e-08,12;UBERON:0005256,9.36e-08,45;UBERON:0000025,4.46e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.695036658406197,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0,0,0,0.279182999001381,2.8138130501584,1.06958773443767,0,0.284743361598206,0.186399445825301,0.075726193333184,0.0755715601067855,1.15945795480671,3.44169550792555,4.75979933595425,7.55584468292944,6.49776417447669,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,1.1418387971906,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0,1.04853447583376,0,0.376963056338593,1.04294592115366,1.79000820131231,1.0389402227978,1.62241263067758,0.101839363850316,0.124406970610093,0.252722758433675,6.94458124425364,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,3.88055056108524,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0.284163499395593,0.414251545071004,2.11073453982987,1.62055855314913,0.946978942340841,0.787056926989615,0.462801338662135,0,0.536546802799238,0.350296027101508,0.493679549740441,1.14917224855367,0.162137619091711,0.877199924551994,0.878200461164203,0.536825675041487,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0.329397909448022,1.00534083520108,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,5.92905254174298,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.964708639009667,0,0.863088412352432,1.78348749452539,2.19649130550465,10.0637744569148,4.09355042435354,4.05648975048929,5.80931419278357,2.51156378930677,3.37710464954357,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0,0,0.345369963731791,0.433947175744535,0,0,0,0.827810238914197,0.642202359951168,0.468846746368813,0,0.504941854408746,0.94652465824877,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.57057053137446,0,0.178065603667255,0,0,1.32745138339963,0.971122544619926,1.209294227859,2.82907619633847,1.47650946440386,0.922305443831782,0.516856586336442,1.45413491791002,2.13898427030833,2.84433082142234,0,2.06271086496374,2.04263763452273,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0,0.42366414172764,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0.619160603889667,0.185194527369712,0,0,0,0.679913719975421,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0,0.674321731924103,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.608175645870493,0.410843828659309,0.25984164595559,0.358053391334963,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,2.26730383615211,0,0.179427713218951,0,1.35232715822533,0,0,0.214368379079066,1.00314420807073,1.6942555278512,0.460325236507177,0,0.68741272937475,0.685082519770642,2.2661816921691,1.35004500046361,1.35096360967266,2.71885445390523,1.55328093525546,0,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.919217542250071,0.222246727801615,1.23621034343337,0,0,0.50695859978048,0.188626341386076,0.655490552289177,0.192075457214608,0.574354689556133,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,1.24233064311536,0.476872379894642,1.0174249164263,0.564656282491984,0.25384382367503,0.182927972872773,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,0.249810577937946,0,0.214871054048298,1.3390183244819,0.441182838239031,0 | |||
|short_description=p@chr5:113567692..113567703,+ | |||
}} |
Revision as of 06:00, 14 September 2013
Short description: | p@chr5:113567692..113567703, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:113567692..113567703, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.16e-17 | 23 |
sac | 1.16e-17 | 23 |
liver | 2.52e-16 | 22 |
epithelial sac | 2.52e-16 | 22 |
digestive gland | 2.52e-16 | 22 |
epithelium of foregut-midgut junction | 2.52e-16 | 22 |
anatomical boundary | 2.52e-16 | 22 |
hepatobiliary system | 2.52e-16 | 22 |
foregut-midgut junction | 2.52e-16 | 22 |
hepatic diverticulum | 2.52e-16 | 22 |
liver primordium | 2.52e-16 | 22 |
septum transversum | 2.52e-16 | 22 |
liver bud | 2.52e-16 | 22 |
exocrine gland | 7.38e-14 | 25 |
exocrine system | 7.38e-14 | 25 |
endocrine system | 1.43e-08 | 72 |
epithelial tube | 2.20e-08 | 47 |
anatomical conduit | 4.07e-08 | 122 |
trunk region element | 6.03e-08 | 79 |
pancreas | 6.62e-08 | 12 |
trunk mesenchyme | 9.36e-08 | 45 |
tube | 4.46e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.