FFCP PHASE1:Hg19::chr9:116327852..116327867,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5998|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9999|TSSclassifier=S|UniProt=|association_with_transcript=-107bp_to_uc011lxh.1_5end|description=CAGE_peak_9_at_RGS3_5end|id=chr9:116327852..116327867,+|ontology_enrichment_celltype=CL:0000066!1.04e-07!254;CL:0002076!2.55e-07!43|ontology_enrichment_celltype_v019=CL:0002076;9.41e-11;42!CL:0002368;2.69e-10;13!CL:0002251;1.49e-07;20!CL:0002159;7.20e-07;14|ontology_enrichment_celltype_v019_2=CL:0002076,3.61e-13,42;CL:0000066,4.52e-13,253;CL:0002368,3.62e-10,13;CL:0000223,3.31e-09,58;CL:0002251,2.02e-07,20;CL:0002159,6.99e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.68e-07!115;UBERON:0003103!4.21e-07!69|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.76e-07,160;UBERON:0000925,2.76e-07,160;UBERON:0006595,2.76e-07,160|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,1.04474251279935,1.22866968250754,4.18680700783456,1.52908960491121,0.791300934685361,0.990130823680373,0.994192127183747,0,0,0,0,0,1.22400414746552,1.25381888591235,0,0.410623275218653,0,0.916960868975415,0.246301768349837,0.550975469195755,0,0,0.464448369948228,0,2.10844143144775,4.80680213216824,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0,0.727752183563449,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0,0,0,0,0,0,0,2.13112375266347,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,1.34140171940727,1.79007586580942,0.361439152384566,1.50401373190767,0.144846518960824,1.5905718941022,1.45990461090791,1.79616152611729,1.55210578223795,2.10803485663503,0.327447688744282,5.46442932438813,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,15.511210565933,2.18047026071267,0,0.506522046658319,0,0.286836620748814,0.709336764396714,0.560677600142307,0,1.72667283892012,0.933633106199299,0.134710672069688,0,0.302714855289863,0,0.70296429550139,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0.427114777637135,0.211931901159562,0,0,0,0,0.337552664482532,0.292311015483596,0,0.0920498986422993,0,0,0,0.508681776931463,3.67195621010264,1.09098448236334,2.29443676311203,0.243947412259191,0,0.116193942869518,1.14027160516907,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,2.85350742062426,6.74410519545717,0.402115889646523,1.11106134190236,0,0,0,0.463721619900307,1.05667824812239,0,0,0,0,0,0,0,0,2.81201501960331,1.00789276919316,1.70130116690864,3.22410681730254,1.74380363108377,4.21720947081732,0,0,0.414656231081544,0,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,0,1.80863626235752,0.871533458600294,6.09835246210548,0,0,0,0.479249710983165,2.29723871668228,5.70547620162874,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,14.9801404789436,8.97484377612075,16.1622050240054,0.858840442033979,1.50051156317903,0.813795071099207,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0,2.27407504055985,3.10419213877515,0,0.553107505625109,0,2.74121620447837,1.71571711905428,0,0.647142602455851,0,0.909382714338778,0,1.5119514666484,0,0.306923946576125,0.280660094433074,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,8.22076528243468,3.49907757956406,0,0.364182336013434,0.131124414959424,4.96319574198153,0.924184045252977,0.784349769176855,1.46139224653261,0.949964660035881,0,0,0,0,2.98041081298238,5.01689773854853,1.01950509218015,2.49322802678617,0.671624264166535,0,0,0.512900250232778,1.96808787419823,1.95227036798582,0.824328093181778,0.27470839445503,0,3.44559322797703,4.55042172225565,0,0.773365746336976,0,0.460511024178389,0,0.107420244868274,0.145016693914229,0.255679882248303,1.33548053470106,9.75181000629771,8.26417289669956,4.72167036229961,8.29493803015509,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,1.48863347743867,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,2.50177493086331,2.01090682660736,4.3556393944529,0.847294206991012,1.29151611801369,3.36942951335251,3.10401107475673,2.52695740227655,2.53723804616085,5.35246044999663,9.1143549947866,4.52640373369799,4.11362273086194,5.8362598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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-107bp_to_uc011lxh.1_5end | |||
|description=CAGE_peak_9_at_RGS3_5end | |||
|id=chr9:116327852..116327867,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-07!254;CL:0002076!2.55e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.41e-11;42!CL:0002368;2.69e-10;13!CL:0002251;1.49e-07;20!CL:0002159;7.20e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.61e-13,42;CL:0000066,4.52e-13,253;CL:0002368,3.62e-10,13;CL:0000223,3.31e-09,58;CL:0002251,2.02e-07,20;CL:0002159,6.99e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-07!115;UBERON:0003103!4.21e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.76e-07,160;UBERON:0000925,2.76e-07,160;UBERON:0006595,2.76e-07,160 | |||
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| |||
|short_description=p9@RGS3 | |||
}} |
Revision as of 07:04, 14 September 2013
Short description: | p9@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.61e-13 | 42 |
epithelial cell | 4.52e-13 | 253 |
respiratory epithelial cell | 3.62e-10 | 13 |
endodermal cell | 3.31e-09 | 58 |
epithelial cell of alimentary canal | 2.02e-07 | 20 |
general ecto-epithelial cell | 6.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.76e-07 | 160 |
endoderm | 2.76e-07 | 160 |
presumptive endoderm | 2.76e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.