FFCP PHASE1:Mm9::chr5:77251379..77251443,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:77251379..77251443,+|id=chr5:77251379..77251443,+|ontology_enrichment_celltype=CL:0002563!4.12e-09!9;CL:0002251!4.12e-09!9;CL:0000239!1.75e-07!6;CL:0000677!1.75e-07!6;CL:0000212!1.75e-07!6;CL:0000584!1.75e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.02e-10,9;CL:0002251,1.02e-10,9;CL:0000239,2.09e-10,6;CL:0000677,2.09e-10,6;CL:0000584,2.09e-10,6;CL:0000075,8.96e-09,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.66e-19!59;UBERON:0000160!6.15e-18!43;UBERON:0000344!2.45e-15!15;UBERON:0001242!1.76e-13!13;UBERON:0000060!1.76e-13!13;UBERON:0001262!1.76e-13!13;UBERON:0004786!1.76e-13!13;UBERON:0003350!4.12e-09!9;UBERON:0004808!4.12e-09!9;UBERON:0001277!4.12e-09!9;UBERON:0004923!1.14e-07!24;UBERON:0000485!5.44e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.97e-36,31;UBERON:0005409,1.32e-32,47;UBERON:0000344,7.32e-20,15;UBERON:0001242,4.19e-17,13;UBERON:0001262,4.19e-17,13;UBERON:0004786,4.19e-17,13;UBERON:0004923,5.86e-11,24;UBERON:0003350,1.02e-10,9;UBERON:0004808,1.02e-10,9;UBERON:0001277,1.02e-10,9;UBERON:0001007,2.53e-09,116;UBERON:0001555,2.53e-09,116;UBERON:0007026,2.53e-09,116;UBERON:0004119,5.19e-09,118;UBERON:0000925,5.19e-09,118;UBERON:0006595,5.19e-09,118;UBERON:0000485,1.80e-08,11;UBERON:0002108,4.66e-08,4;UBERON:0004921,4.77e-08,114|phase1_expression=0,57.5809422604946,42.3149292632269,58.678056993525,51.0913644545274,4.8684988854448,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5991665072747,13.3057383018959,37.3250776674763,25.8457197695445,23.7018355954478,91.2112413390595,60.2352010126234,18.4036323843903,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,8.44960709921044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,66.6742914094423,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89397670297827,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.1099875499054,50.2456076660734,0,0,0.644337306610467,5.04208811558356,9.33987784148455,17.5007576023554,46.5038480313621,40.1865449526587,29.6575546384318,23.4768637008558,34.118715245846,64.714997423104,40.6339533764425,40.8239610171453,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.841629838683823,0.0632365371242573,0.147610147979602,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0787034335606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.4620906724896,0.18542530201051,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0.209088296014469,2.83871332870031,3.2367443132357,2.97552440611209,6.54389854960074,16.7203315546413,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,1.11123363900808,1.03017528619447,1.28367683836726,1.26348605881899,0.50695859978048,1.50901073108861,1.03005658216871,1.15245274328765,1.09127391015665,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,1.17759136107518,0.685738504770831,1.06485483695602,0.238436189947321,1.0174249164263,1.59985946706062,0.676916863133412,0.914639864363863,1.57841826862706,1.62964936615034,1.68342681497322,0.355905054372522,0.689531376628944,1.22769312950907,0.929621047115796,0.771626443924566,0,0.701794825336225,2.14871054048298,0,0,0|short_description=p@chr5:77251379..77251443,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:77251379..77251443,+ | |||
|id=chr5:77251379..77251443,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.12e-09!9;CL:0002251!4.12e-09!9;CL:0000239!1.75e-07!6;CL:0000677!1.75e-07!6;CL:0000212!1.75e-07!6;CL:0000584!1.75e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.02e-10,9;CL:0002251,1.02e-10,9;CL:0000239,2.09e-10,6;CL:0000677,2.09e-10,6;CL:0000584,2.09e-10,6;CL:0000075,8.96e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.66e-19!59;UBERON:0000160!6.15e-18!43;UBERON:0000344!2.45e-15!15;UBERON:0001242!1.76e-13!13;UBERON:0000060!1.76e-13!13;UBERON:0001262!1.76e-13!13;UBERON:0004786!1.76e-13!13;UBERON:0003350!4.12e-09!9;UBERON:0004808!4.12e-09!9;UBERON:0001277!4.12e-09!9;UBERON:0004923!1.14e-07!24;UBERON:0000485!5.44e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.97e-36,31;UBERON:0005409,1.32e-32,47;UBERON:0000344,7.32e-20,15;UBERON:0001242,4.19e-17,13;UBERON:0001262,4.19e-17,13;UBERON:0004786,4.19e-17,13;UBERON:0004923,5.86e-11,24;UBERON:0003350,1.02e-10,9;UBERON:0004808,1.02e-10,9;UBERON:0001277,1.02e-10,9;UBERON:0001007,2.53e-09,116;UBERON:0001555,2.53e-09,116;UBERON:0007026,2.53e-09,116;UBERON:0004119,5.19e-09,118;UBERON:0000925,5.19e-09,118;UBERON:0006595,5.19e-09,118;UBERON:0000485,1.80e-08,11;UBERON:0002108,4.66e-08,4;UBERON:0004921,4.77e-08,114 | |||
|phase1_expression=0,57.5809422604946,42.3149292632269,58.678056993525,51.0913644545274,4.8684988854448,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5991665072747,13.3057383018959,37.3250776674763,25.8457197695445,23.7018355954478,91.2112413390595,60.2352010126234,18.4036323843903,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,8.44960709921044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,66.6742914094423,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89397670297827,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.1099875499054,50.2456076660734,0,0,0.644337306610467,5.04208811558356,9.33987784148455,17.5007576023554,46.5038480313621,40.1865449526587,29.6575546384318,23.4768637008558,34.118715245846,64.714997423104,40.6339533764425,40.8239610171453,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.841629838683823,0.0632365371242573,0.147610147979602,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0787034335606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.4620906724896,0.18542530201051,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0.209088296014469,2.83871332870031,3.2367443132357,2.97552440611209,6.54389854960074,16.7203315546413,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,1.11123363900808,1.03017528619447,1.28367683836726,1.26348605881899,0.50695859978048,1.50901073108861,1.03005658216871,1.15245274328765,1.09127391015665,0.952587382566147,0.927074607558844,0.578727661391115,0.824171801606613,1.17759136107518,0.685738504770831,1.06485483695602,0.238436189947321,1.0174249164263,1.59985946706062,0.676916863133412,0.914639864363863,1.57841826862706,1.62964936615034,1.68342681497322,0.355905054372522,0.689531376628944,1.22769312950907,0.929621047115796,0.771626443924566,0,0.701794825336225,2.14871054048298,0,0,0 | |||
|short_description=p@chr5:77251379..77251443,+ | |||
}} |
Revision as of 08:02, 14 September 2013
Short description: | p@chr5:77251379..77251443, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77251379..77251443, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.02e-10 | 9 |
epithelial cell of alimentary canal | 1.02e-10 | 9 |
brush border epithelial cell | 2.09e-10 | 6 |
gut absorptive cell | 2.09e-10 | 6 |
enterocyte | 2.09e-10 | 6 |
columnar/cuboidal epithelial cell | 8.96e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.97e-36 | 31 |
gastrointestinal system | 1.32e-32 | 47 |
mucosa | 7.32e-20 | 15 |
intestinal mucosa | 4.19e-17 | 13 |
wall of intestine | 4.19e-17 | 13 |
gastrointestinal system mucosa | 4.19e-17 | 13 |
organ component layer | 5.86e-11 | 24 |
epithelium of mucosa | 1.02e-10 | 9 |
gastrointestinal system epithelium | 1.02e-10 | 9 |
intestinal epithelium | 1.02e-10 | 9 |
digestive system | 2.53e-09 | 116 |
digestive tract | 2.53e-09 | 116 |
primitive gut | 2.53e-09 | 116 |
endoderm-derived structure | 5.19e-09 | 118 |
endoderm | 5.19e-09 | 118 |
presumptive endoderm | 5.19e-09 | 118 |
simple columnar epithelium | 1.80e-08 | 11 |
small intestine | 4.66e-08 | 4 |
subdivision of digestive tract | 4.77e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.