FFCP PHASE1:Mm9::chr5:90897690..90897717,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:90897690..90897717,-|id=chr5:90897690..90897717,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.84e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.60e-25!22;UBERON:0007499!9.60e-25!22;UBERON:0006925!9.60e-25!22;UBERON:0009497!9.60e-25!22;UBERON:0000015!9.60e-25!22;UBERON:0002423!9.60e-25!22;UBERON:0006235!9.60e-25!22;UBERON:0008835!9.60e-25!22;UBERON:0003894!9.60e-25!22;UBERON:0004161!9.60e-25!22;UBERON:0008836!9.60e-25!22;UBERON:0009854!2.69e-23!23;UBERON:0009856!2.69e-23!23;UBERON:0002365!9.30e-21!25;UBERON:0002330!9.30e-21!25;UBERON:0005172!5.64e-13!49;UBERON:0005173!5.64e-13!49;UBERON:0002417!5.64e-13!49;UBERON:0000916!5.64e-13!49;UBERON:0005256!3.83e-12!47;UBERON:0009569!2.76e-09!66;UBERON:0002368!1.14e-07!60;UBERON:0003914!1.74e-07!47;UBERON:0000949!2.57e-07!72;UBERON:0005177!2.57e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.26e-34,22;UBERON:0007499,5.26e-34,22;UBERON:0006925,5.26e-34,22;UBERON:0009497,5.26e-34,22;UBERON:0000015,5.26e-34,22;UBERON:0002423,5.26e-34,22;UBERON:0006235,5.26e-34,22;UBERON:0008835,5.26e-34,22;UBERON:0003894,5.26e-34,22;UBERON:0004161,5.26e-34,22;UBERON:0008836,5.26e-34,22;UBERON:0009854,2.84e-32,23;UBERON:0009856,2.84e-32,23;UBERON:0002365,3.18e-29,25;UBERON:0002330,3.18e-29,25;UBERON:0005256,5.53e-17,45;UBERON:0005172,4.25e-15,49;UBERON:0005173,4.25e-15,49;UBERON:0002417,4.25e-15,49;UBERON:0000916,4.25e-15,49;UBERON:0003914,6.76e-13,47;UBERON:0002368,3.11e-11,60;UBERON:0003104,5.92e-11,61;UBERON:0009142,5.92e-11,61;UBERON:0003929,3.09e-10,55;UBERON:0002530,6.38e-10,65;UBERON:0009569,1.10e-09,66;UBERON:0000949,2.50e-09,72;UBERON:0005177,5.56e-08,79;UBERON:0000490,1.14e-07,66;UBERON:0005911,4.07e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,17.2084775396277,15.6393406752783,43.7159585226632,33.7883737072788,21.9533174677694,8.28622078777336,0,0,0,0,0,0,0,0,0,0,16.3282947998256,0,0,0,0.913396434936424,1.84492397804847,1.95939432718409,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.570676878337677,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,55.1401886382097,0.333690211432188,1.17935397067922,1.79889689907883,4.05720242777006,11.576503668116,28.2634695477376,27.6188291952778,21.4018499343047,31.0254396902532,66.1333750025831,45.0290546678889,42.7491612166948,31.8249386213361,38.3910464936892,52.1039003072437,0,0.189491411770485,0.162964976442026,0,0,0,0.952174563544055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0,0.436725127492355,0.809186078308924,4.21532624199213,0,0,0,0,0,0,0,0.129159823477731,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,0.972426868273176,1.04806581313991,0.919217542250071,1.33348036680969,1.64828045791115,0.64183841918363,1.01078884705519,0.25347929989024,0.565879024158229,1.77918864192777,1.21647789569252,0.918967503289812,0.476293691283074,1.27472758539341,1.54327376370964,0.824171801606613,1.32479028120958,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,1.50575008664529,2.19997980518359,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.06771516311757,1.47756723563345,1.63692417267876,0.77468420592983,1.54325288784913,0,2.57324769289949,1.50409737833809,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p@chr5:90897690..90897717,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:90897690..90897717,- | |||
|id=chr5:90897690..90897717,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.84e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.60e-25!22;UBERON:0007499!9.60e-25!22;UBERON:0006925!9.60e-25!22;UBERON:0009497!9.60e-25!22;UBERON:0000015!9.60e-25!22;UBERON:0002423!9.60e-25!22;UBERON:0006235!9.60e-25!22;UBERON:0008835!9.60e-25!22;UBERON:0003894!9.60e-25!22;UBERON:0004161!9.60e-25!22;UBERON:0008836!9.60e-25!22;UBERON:0009854!2.69e-23!23;UBERON:0009856!2.69e-23!23;UBERON:0002365!9.30e-21!25;UBERON:0002330!9.30e-21!25;UBERON:0005172!5.64e-13!49;UBERON:0005173!5.64e-13!49;UBERON:0002417!5.64e-13!49;UBERON:0000916!5.64e-13!49;UBERON:0005256!3.83e-12!47;UBERON:0009569!2.76e-09!66;UBERON:0002368!1.14e-07!60;UBERON:0003914!1.74e-07!47;UBERON:0000949!2.57e-07!72;UBERON:0005177!2.57e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.26e-34,22;UBERON:0007499,5.26e-34,22;UBERON:0006925,5.26e-34,22;UBERON:0009497,5.26e-34,22;UBERON:0000015,5.26e-34,22;UBERON:0002423,5.26e-34,22;UBERON:0006235,5.26e-34,22;UBERON:0008835,5.26e-34,22;UBERON:0003894,5.26e-34,22;UBERON:0004161,5.26e-34,22;UBERON:0008836,5.26e-34,22;UBERON:0009854,2.84e-32,23;UBERON:0009856,2.84e-32,23;UBERON:0002365,3.18e-29,25;UBERON:0002330,3.18e-29,25;UBERON:0005256,5.53e-17,45;UBERON:0005172,4.25e-15,49;UBERON:0005173,4.25e-15,49;UBERON:0002417,4.25e-15,49;UBERON:0000916,4.25e-15,49;UBERON:0003914,6.76e-13,47;UBERON:0002368,3.11e-11,60;UBERON:0003104,5.92e-11,61;UBERON:0009142,5.92e-11,61;UBERON:0003929,3.09e-10,55;UBERON:0002530,6.38e-10,65;UBERON:0009569,1.10e-09,66;UBERON:0000949,2.50e-09,72;UBERON:0005177,5.56e-08,79;UBERON:0000490,1.14e-07,66;UBERON:0005911,4.07e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,17.2084775396277,15.6393406752783,43.7159585226632,33.7883737072788,21.9533174677694,8.28622078777336,0,0,0,0,0,0,0,0,0,0,16.3282947998256,0,0,0,0.913396434936424,1.84492397804847,1.95939432718409,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.570676878337677,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,55.1401886382097,0.333690211432188,1.17935397067922,1.79889689907883,4.05720242777006,11.576503668116,28.2634695477376,27.6188291952778,21.4018499343047,31.0254396902532,66.1333750025831,45.0290546678889,42.7491612166948,31.8249386213361,38.3910464936892,52.1039003072437,0,0.189491411770485,0.162964976442026,0,0,0,0.952174563544055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0,0.436725127492355,0.809186078308924,4.21532624199213,0,0,0,0,0,0,0,0.129159823477731,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,0.972426868273176,1.04806581313991,0.919217542250071,1.33348036680969,1.64828045791115,0.64183841918363,1.01078884705519,0.25347929989024,0.565879024158229,1.77918864192777,1.21647789569252,0.918967503289812,0.476293691283074,1.27472758539341,1.54327376370964,0.824171801606613,1.32479028120958,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,1.50575008664529,2.19997980518359,1.09756783723664,1.05227884575137,1.49384525230448,1.12228454331548,1.06771516311757,1.47756723563345,1.63692417267876,0.77468420592983,1.54325288784913,0,2.57324769289949,1.50409737833809,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr5:90897690..90897717,- | |||
}} |
Revision as of 08:16, 14 September 2013
Short description: | p@chr5:90897690..90897717, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:90897690..90897717, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.84e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 5.26e-34 | 22 |
epithelial sac | 5.26e-34 | 22 |
digestive gland | 5.26e-34 | 22 |
epithelium of foregut-midgut junction | 5.26e-34 | 22 |
anatomical boundary | 5.26e-34 | 22 |
hepatobiliary system | 5.26e-34 | 22 |
foregut-midgut junction | 5.26e-34 | 22 |
hepatic diverticulum | 5.26e-34 | 22 |
liver primordium | 5.26e-34 | 22 |
septum transversum | 5.26e-34 | 22 |
liver bud | 5.26e-34 | 22 |
digestive tract diverticulum | 2.84e-32 | 23 |
sac | 2.84e-32 | 23 |
exocrine gland | 3.18e-29 | 25 |
exocrine system | 3.18e-29 | 25 |
trunk mesenchyme | 5.53e-17 | 45 |
abdomen element | 4.25e-15 | 49 |
abdominal segment element | 4.25e-15 | 49 |
abdominal segment of trunk | 4.25e-15 | 49 |
abdomen | 4.25e-15 | 49 |
epithelial tube | 6.76e-13 | 47 |
endocrine gland | 3.11e-11 | 60 |
mesenchyme | 5.92e-11 | 61 |
entire embryonic mesenchyme | 5.92e-11 | 61 |
gut epithelium | 3.09e-10 | 55 |
gland | 6.38e-10 | 65 |
subdivision of trunk | 1.10e-09 | 66 |
endocrine system | 2.50e-09 | 72 |
trunk region element | 5.56e-08 | 79 |
unilaminar epithelium | 1.14e-07 | 66 |
endo-epithelium | 4.07e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.