FFCP PHASE1:Hg19::chr9:35520634..35520645,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4821|description=CAGE_peak_at_chr9:35520634..35520645,+|id=chr9:35520634..35520645,+|ontology_enrichment_celltype=CL:0000077!1.62e-09!19|ontology_enrichment_celltype_v019=CL:0000077;2.88e-10;19!CL:0002580;1.57e-08;3!CL:0002541;2.80e-08;3!CL:0000632;2.80e-08;3!CL:0002334;1.27e-07;12!CL:0000349;3.64e-07;19!CL:0000222;8.00e-07;1!CL:0002581;8.00e-07;1|ontology_enrichment_celltype_v019_2=CL:0000077,3.02e-10,19;CL:0002580,1.38e-08,3;CL:0000632,2.51e-08,3;CL:0002541,3.76e-08,3;CL:0002334,1.36e-07,12;CL:0000349,4.15e-07,19;CL:0002581,6.38e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3369;8.00e-07;1!DOID:3571;8.00e-07;1|ontology_enrichment_disease_v019_2=DOID:3369,5.69e-07,1;DOID:3571,7.57e-07,1|ontology_enrichment_uberon=UBERON:0003688!1.23e-07!6;UBERON:0002358!1.23e-07!6;UBERON:0003684!1.23e-07!6;UBERON:0001178!1.23e-07!6;UBERON:0005631!3.57e-07!14;UBERON:0000158!3.57e-07!14|ontology_enrichment_uberon_v019=UBERON:0003124;2.80e-08;3!UBERON:0000920;2.80e-08;3!UBERON:0007195;8.00e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.76e-08,3;UBERON:0003124,1.29e-07,7|phase1_expression=0.363356758541113,0,0.845726424575827,1.0007329835313,0,0,2.53299878168311,0,0,1.47440361900905,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0,0.286836620748814,0,0,3.20246987189115,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0,0.423863802319124,0,0,0,0.37223371266318,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.958499421966331,4.59447743336456,0,2.46128221334885,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,1.42743191037729,0.473107245101804,2.45996971484698,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0,1.48864684691266,2.14846762603287,0,0.256278298511402,1.02341449813341,0.64341568457443,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,1.78064071293475,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0.638002319463839,1.37396390102793,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.314727528809989,0,0,0,0,0,6.35671344136875,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,1.99047944349308,0.800055529326307,0,0,1.26184898228651,0,0,4.95889154733902,2.04035332961045,0.231522474323834,1.95789363605174,1.25362188757041,2.77921302444875,0,0,0.192914038270915,0.168942440653073,1.02496607435179,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,1.29556554731173,0,0,0,1.04617282831313,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,6.95888658802919,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0,0,0.714193294391221,0,0,0,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:35520634..35520645,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4821 | |||
|description=CAGE_peak_at_chr9:35520634..35520645,+ | |||
|id=chr9:35520634..35520645,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.62e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.88e-10;19!CL:0002580;1.57e-08;3!CL:0002541;2.80e-08;3!CL:0000632;2.80e-08;3!CL:0002334;1.27e-07;12!CL:0000349;3.64e-07;19!CL:0000222;8.00e-07;1!CL:0002581;8.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.02e-10,19;CL:0002580,1.38e-08,3;CL:0000632,2.51e-08,3;CL:0002541,3.76e-08,3;CL:0002334,1.36e-07,12;CL:0000349,4.15e-07,19;CL:0002581,6.38e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;8.00e-07;1!DOID:3571;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.69e-07,1;DOID:3571,7.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.23e-07!6;UBERON:0002358!1.23e-07!6;UBERON:0003684!1.23e-07!6;UBERON:0001178!1.23e-07!6;UBERON:0005631!3.57e-07!14;UBERON:0000158!3.57e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.80e-08;3!UBERON:0000920;2.80e-08;3!UBERON:0007195;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.76e-08,3;UBERON:0003124,1.29e-07,7 | |||
|phase1_expression=0.363356758541113,0,0.845726424575827,1.0007329835313,0,0,2.53299878168311,0,0,1.47440361900905,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0,0.286836620748814,0,0,3.20246987189115,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0,0.423863802319124,0,0,0,0.37223371266318,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.958499421966331,4.59447743336456,0,2.46128221334885,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,1.42743191037729,0.473107245101804,2.45996971484698,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0,1.48864684691266,2.14846762603287,0,0.256278298511402,1.02341449813341,0.64341568457443,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,1.78064071293475,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0.638002319463839,1.37396390102793,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.314727528809989,0,0,0,0,0,6.35671344136875,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,1.99047944349308,0.800055529326307,0,0,1.26184898228651,0,0,4.95889154733902,2.04035332961045,0.231522474323834,1.95789363605174,1.25362188757041,2.77921302444875,0,0,0.192914038270915,0.168942440653073,1.02496607435179,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,1.29556554731173,0,0,0,1.04617282831313,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,6.95888658802919,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0,0,0.714193294391221,0,0,0,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:35520634..35520645,+ | |||
}} |
Revision as of 08:54, 14 September 2013
Short description: | p@chr9:35520634..35520645, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:35520634..35520645, + |
Coexpression cluster: | C4821_skeletal_leiomyoblastoma_mesothelioma_Olfactory_Adipocyte_Myoblast_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.02e-10 | 19 |
preadipocyte of the breast | 1.38e-08 | 3 |
hepatic stellate cell | 2.51e-08 | 3 |
chorionic membrane mesenchymal stem cell | 3.76e-08 | 3 |
preadipocyte | 1.36e-07 | 12 |
extraembryonic cell | 4.15e-07 | 19 |
perirenal preadipocyte | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.76e-08 | 3 |
chorion | 1.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.69e-07 | 1 |
liver cancer | 7.57e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.